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Report for CCDS3983.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3983.2 Public Homo sapiens 5 ADAMTS6 24 110 108 CCDS HistoryNCBI Gene:11174Re-query CCDS DB by CCDS ID:3983.2See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 3983.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381055.8 ENSP00000370443.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381055.8Link to Ensembl Protein Viewer:ENSP00000370443.3Re-query CCDS DB by Nucleotide ID:ENST00000381055Re-query CCDS DB by Protein ID:ENSP00000370443
Original member Current member NCBI NM_197941.4 NP_922932.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_197941.4Link to Protein Sequence:NP_922932.2Re-query CCDS DB by Nucleotide ID:NM_197941Re-query CCDS DB by Protein ID:NP_922932Link to BLAST:NP_922932.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_922932.2 1117 Q9UKP5-1 1117 100% 0 0

Chromosomal Locations for CCDS 3983.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 65151836 65151945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65170617 65170773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65172832 65173008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65188016 65188220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65197022 65197151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65214794 65214932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65215324 65215487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65224320 65224400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65224924 65225047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65226086 65226219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65242104 65242206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65260600 65260663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65262817 65262962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65273340 65273447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65291329 65291470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65299985 65300131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65329378 65329483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65334042 65334085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65451475 65451620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65452133 65452216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65452707 65452918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65460170 65460338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65470778 65471142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 65473577 65473673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3354 nt):
ATGGAAATTTTGTGGAAGACGTTGACCTGGATTTTGAGCCTCATCATGGCTTCATCGGAATTTCATAGTG
ACCACAGGCTTTCATACAGTTCTCAAGAGGAATTCCTGACTTATCTTGAACACTACCAGCTAACTATTCC
AATAAGGGTTGATCAAAATGGAGCATTTCTCAGCTTTACTGTGAAAAATGATAAACACTCAAGGAGAAGA
CGGAGTATGGACCCTATTGATCCACAGCAGGCAGTATCTAAGTTATTTTTTAAACTTTCAGCCTATGGCA
AGCACTTTCATCTAAACTTGACTCTCAACACAGATTTTGTGTCCAAACATTTTACAGTAGAATATTGGGG
GAAAGATGGACCCCAGTGGAAACATGATTTTTTAGACAACTGTCATTACACAGGATATTTGCAAGATCAA
CGTAGTACAACTAAAGTGGCTTTAAGCAACTGTGTTGGGTTGCATGGTGTTATTGCTACAGAAGATGAAG
AGTATTTTATCGAACCTTTAAAGAATACCACAGAGGATTCCAAGCATTTTAGTTATGAAAATGGCCACCC
TCATGTTATTTACAAAAAGTCTGCCCTTCAACAACGACATCTGTATGATCACTCTCATTGTGGGGTTTCG
GATTTCACAAGAAGTGGCAAACCTTGGTGGCTGAATGACACATCCACTGTTTCTTATTCACTACCAATTA
ACAACACACATATCCACCACAGACAGAAGAGATCAGTGAGCATTGAACGGTTTGTGGAGACATTGGTAGT
GGCAGACAAAATGATGGTGGGCTACCATGGCCGCAAAGACATTGAACATTACATTTTGAGTGTGATGAAT
ATTGTTGCCAAACTTTACCGTGATTCCAGCCTAGGAAACGTTGTGAATATTATAGTGGCCCGCTTAATTG
TTCTCACAGAAGATCAGCCAAACTTGGAGATAAACCACCATGCAGACAAGTCCCTCGATAGCTTCTGTAA
ATGGCAGAAATCCATTCTCTCCCACCAAAGTGATGGAAACACCATTCCAGAAAATGGGATTGCCCACCAC
GATAATGCAGTTCTTATTACTAGATATGATATCTGCACTTATAAAAATAAGCCCTGTGGAACACTGGGCT
TGGCCTCTGTGGCTGGAATGTGTGAGCCTGAAAGGAGCTGCAGCATTAATGAAGACATTGGCCTGGGTTC
AGCTTTTACCATTGCACATGAGATTGGTCACAATTTTGGTATGAACCATGATGGAATTGGAAATTCTTGT
GGGACGAAAGGTCATGAAGCAGCAAAACTTATGGCAGCTCACATTACTGCGAATACCAATCCTTTTTCCT
GGTCTGCTTGCAGTCGAGACTACATCACCAGCTTTCTAGATTCAGGCCGTGGTACTTGCCTTGATAATGA
GCCTCCCAAGCGTGACTTTCTTTATCCAGCTGTGGCCCCAGGTCAGGTGTATGATGCTGATGAGCAATGT
CGTTTCCAGTATGGAGCAACCTCCCGCCAATGTAAATATGGGGAAGTGTGTAGAGAGCTCTGGTGTCTCA
GCAAAAGCAACCGCTGTGTCACCAACAGTATTCCAGCAGCTGAGGGGACACTGTGTCAAACTGGGAATAT
TGAAAAAGGGTGGTGTTATCAGGGAGATTGTGTTCCTTTTGGCACTTGGCCCCAGAGCATAGATGGGGGC
TGGGGTCCCTGGTCACTATGGGGAGAGTGCAGCAGGACCTGCGGGGGAGGCGTCTCCTCATCCCTAAGAC
ACTGTGACAGTCCAGCACCTTCAGGAGGTGGAAAATATTGCCTTGGGGAAAGGAAACGGTATCGCTCCTG
TAACACAGATCCATGCCCTTTGGGTTCCCGAGATTTTCGAGAGAAACAGTGTGCAGACTTTGACAATATG
CCTTTCCGAGGAAAGTATTATAACTGGAAACCCTATACTGGAGGTGGGGTAAAACCTTGTGCATTAAACT
GCTTGGCTGAAGGTTATAATTTCTACACTGAACGTGCTCCTGCGGTGATCGATGGGACCCAGTGCAATGC
GGATTCACTGGATATCTGCATCAATGGAGAATGCAAGCACGTAGGCTGTGATAATATTTTGGGATCTGAT
GCTAGGGAAGATAGATGTCGAGTCTGTGGAGGGGACGGAAGCACATGTGATGCCATTGAAGGGTTCTTCA
ATGATTCACTGCCCAGGGGAGGCTACATGGAAGTGGTGCAGATACCAAGAGGCTCTGTTCACATTGAAGT
TAGAGAAGTTGCCATGTCAAAGAACTATATTGCTTTAAAATCTGAAGGAGATGATTACTATATTAATGGT
GCCTGGACTATTGACTGGCCTAGGAAATTTGATGTTGCTGGGACAGCTTTTCATTACAAGAGACCAACTG
ATGAACCAGAATCCTTGGAAGCTCTAGGTCCTACCTCAGAAAATCTCATCGTCATGGTTCTGCTTCAAGA
ACAGAATTTGGGAATTAGGTATAAGTTCAATGTTCCCATCACTCGAACTGGCAGTGGAGATAATGAAGTT
GGCTTTACATGGAATCATCAGCCTTGGTCAGAATGCTCAGCTACTTGTGCTGGAGGTGTCCAAAGACAGG
AGGTGGTCTGTAAAAGGTTGGATGACAACTCCATTGTCCAGAACAATTACTGTGATCCTGACAGTAAGCC
ACCTGAAAATCAAAGAGCCTGCAACACTGAGCCCTGCCCACCTGAGTGGTTCATTGGGGATTGGTTGGAA
TGCAGCAAGACTTGTGATGGTGGGATGCGCACAAGGGCAGTGCTCTGCATCAGGAAGATCGGACCTTCTG
AGGAGGAGACGCTGGACTACAGTGGTTGTTTAACACACCGGCCTGTCGAAAAAGAGCCCTGCAACAACCA
GTCATGTCCACCACAGTGGGTGGCTTTGGACTGGTCTGAGTGTACTCCAAAATGTGGTCCAGGATTCAAG
CATCGGATTGTTCTGTGCAAGAGCAGTGACCTTTCTAAGACATTCCCAGCTGCACAATGTCCAGAGGAAA
GCAAACCTCCTGTCCGCATCCGCTGCAGTTTGGGCCGCTGCCCTCCTCCTCGCTGGGTCACAGGAGACTG
GGGCCAGTGTTCTGCTCAGTGTGGCCTTGGACAGCAGATGAGAACTGTGCAGTGTCTCTCCTACACCGGA
CAGGCATCTAGTGACTGTCTAGAAACTGTTCGGCCTCCATCAATGCAGCAGTGTGAAAGCAAATGTGACA
GTACCCCCATTTCTAATACTGAAGAGTGCAAAGATGTGAATAAAGTGGCTTATTGCCCACTGGTGCTGAA
GTTCAAGTTCTGCAGTCGAGCATACTTCAGACAGATGTGTTGTAAGACCTGCCAAGGACACTGA

Translation (1117 aa):
MEILWKTLTWILSLIMASSEFHSDHRLSYSSQEEFLTYLEHYQLTIPIRVDQNGAFLSFTVKNDKHSRRR
RSMDPIDPQQAVSKLFFKLSAYGKHFHLNLTLNTDFVSKHFTVEYWGKDGPQWKHDFLDNCHYTGYLQDQ
RSTTKVALSNCVGLHGVIATEDEEYFIEPLKNTTEDSKHFSYENGHPHVIYKKSALQQRHLYDHSHCGVS
DFTRSGKPWWLNDTSTVSYSLPINNTHIHHRQKRSVSIERFVETLVVADKMMVGYHGRKDIEHYILSVMN
IVAKLYRDSSLGNVVNIIVARLIVLTEDQPNLEINHHADKSLDSFCKWQKSILSHQSDGNTIPENGIAHH
DNAVLITRYDICTYKNKPCGTLGLASVAGMCEPERSCSINEDIGLGSAFTIAHEIGHNFGMNHDGIGNSC
GTKGHEAAKLMAAHITANTNPFSWSACSRDYITSFLDSGRGTCLDNEPPKRDFLYPAVAPGQVYDADEQC
RFQYGATSRQCKYGEVCRELWCLSKSNRCVTNSIPAAEGTLCQTGNIEKGWCYQGDCVPFGTWPQSIDGG
WGPWSLWGECSRTCGGGVSSSLRHCDSPAPSGGGKYCLGERKRYRSCNTDPCPLGSRDFREKQCADFDNM
PFRGKYYNWKPYTGGGVKPCALNCLAEGYNFYTERAPAVIDGTQCNADSLDICINGECKHVGCDNILGSD
AREDRCRVCGGDGSTCDAIEGFFNDSLPRGGYMEVVQIPRGSVHIEVREVAMSKNYIALKSEGDDYYING
AWTIDWPRKFDVAGTAFHYKRPTDEPESLEALGPTSENLIVMVLLQEQNLGIRYKFNVPITRTGSGDNEV
GFTWNHQPWSECSATCAGGVQRQEVVCKRLDDNSIVQNNYCDPDSKPPENQRACNTEPCPPEWFIGDWLE
CSKTCDGGMRTRAVLCIRKIGPSEEETLDYSGCLTHRPVEKEPCNNQSCPPQWVALDWSECTPKCGPGFK
HRIVLCKSSDLSKTFPAAQCPEESKPPVRIRCSLGRCPPPRWVTGDWGQCSAQCGLGQQMRTVQCLSYTG
QASSDCLETVRPPSMQQCESKCDSTPISNTEECKDVNKVAYCPLVLKFKFCSRAYFRQMCCKTCQGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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