NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS84132.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84132.1 Public Mus musculus 14 Ktn1 23 108 98 CCDS HistoryNCBI Gene:16709Re-query CCDS DB by CCDS ID:84132.1Re-query CCDS DB by GeneID:16709See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84132.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000189533.6 ENSMUSP00000140142.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000189533.6Link to Ensembl Protein Viewer:ENSMUSP00000140142.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000189533Re-query CCDS DB by Protein ID:ENSMUSP00000140142
Original member Current member NCBI NM_001347525.1 NP_001334454.1 Accepted alive Link to Nucleotide Sequence:NM_001347525.1Link to Protein Sequence:NP_001334454.1Re-query CCDS DB by Nucleotide ID:NM_001347525Re-query CCDS DB by Protein ID:NP_001334454Link to BLAST:NP_001334454.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001334454.1 1247 Q61595-4 1247 99.2783% 0 9

Chromosomal Locations for CCDS 84132.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 47663787 47664315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47667296 47667433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47670125 47670298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47672940 47673070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47674750 47674866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47676685 47676825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47683383 47683489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47684721 47684853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47686256 47686343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47689949 47690115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47690909 47690977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47692439 47692476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47693404 47693494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47693875 47693943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47694610 47694647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47694763 47694844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47695503 47695571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47700620 47700654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47701069 47701159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47701675 47701743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47703129 47703166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47704187 47704277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47705763 47705800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47706408 47706498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47707242 47707279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47708802 47708892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47710842 47710901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47712474 47712508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47714632 47714722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47720196 47720285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47723970 47724050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47724652 47724741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47724878 47724970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47725929 47726000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47726226 47726309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47730340 47730423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47733227 47733322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 47734155 47734259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3744 nt):
ATGGAGCTGTACGAGTCAACGTATTTTGTTGTCCTCATCCCTTCAGTAGTTATTACCGTCATTTTCCTTT
TCTTCTGGCTTTTCATGAAAGAAACATTATATGATGAAGTTCTTGCAAAACAAAAAAGAGAGCAAAAGTT
GATTTCTACAAAAACAGATAAAAAGAAGGCAGAAAAGAAGAAGAATAAAAAGAAAGAAATCCAGAATGGG
ACCCTTCGTGAATCTGATTCTGAGCACGTGCCTCGGGACTTTAAATTATCCGATGCTTCTCCCGCGGAGG
ATGAACAGTTTGTACCTGCTCCACTGAATGTGGCAGAAACTTCCAGTAGTGTTAGGGAAAGAAAGAAGAA
GGAGAAGAAACAAAAACCTTCCCTTGAAGAGCAGGTCATCAAAGAAAGTGATGCATCAAAGATCCCAGGC
AAAAAAGTGGAACCTGTCCTAGTTACCAAACAGCCGGCCCCACCCCCACCCCTCGAAGCAGCTGCCTTGA
AGAAGAAAGCAGGGCAGAAGAAGTCTAAAAATGGAAGCGAAGAGCAAGATAAAAAGGTGGAAATGCTGAT
GGCACCTTCAAAAGAGCAGGACGTGTTGCTTTCCCATCAAGACACTAAGCAAGAAGGTGGACTAGGAAAG
AAGAAAGGCTTGTCAAAGAAGCAAAAGTCAGAAAATGTTGCAGTCTTGGTAGACGAGCCCCTTATTCATG
CAACTACTTACATTCCTTTGGATAATGCTAACTCAAATCTCATGATGGATAAGAGAGAAATTATTGATAT
GATTAAACCTGATCATGTTGAAGGAATCCAGAAATCTGGAACAAAAAAGCTGAAGATTGAAACTGACAAA
GAAAATGCTGAAGTGAAATTTAAAGATTTCCTTCTGTCCTTGAAGACTATGATGTTTTCTGAAGATGAAG
CTCTTTGTGTTGTAGACCTGCTGAAGGAAAAGTCTGGTGTGATAAAAGAAGCTTTAAAGAAGTCGAATAA
AGGAGAACTGAGTGGTCTTCTGCATCAACTTCAGGAGAAGGAGAGGCTGCTCTCTGCCATGAAGGAAGAT
GCTGCTGCCTCAAAGGAGCGCTGTAAGCAGTTGACTCAGGAAATGATGACAGAGAAAGAAAGAAGCAGTG
TTGTTATAGCAAGAATGAAAGATCGGATTGGAACACTAGAAAAGGAACACAATATATTTCAAAACAAAAT
GCATGCCAGTTACCAAGAGACTCAGCAGATGCAGATGAAGTTTCAGCAAGTTCAGGAACAAATGGAAGCA
GAGATAGCTCATTTGAAGCAGGAAAATGGTATCCTGAGAGATGCTGTCAGTAACACTACAAACCAACTGG
AAAGCAAGCAATCCGCAGAGCTAAATAAACTGCGCCAAGACTGTGGGAGGCTGGTGAGTGAACTGAACGA
GAAGACAGGAAAGCTGCAGCAAGAGGGAGTCCAGAAGAAGAATGCGGAGCAAGCTGCTACCCAGCTCAAG
GTTCAACTGCAAGAAGCTGAGAGGCGCTGGGAAGAAGTTCAGAGCTACATCAGGAAGAGGACGGCGGAGC
ATGAGGCTGCCCAGCAAGATTTACAAAGTAAATTTGTGGCCAAAGAAAATGAAGTCCAGAGTCTACATAG
TAAGCTCACAGACACCTTGGTATCAAAACAGCAATTGGAGCAAAGACTAATGCAGTTGATGGAATCCGAG
CAAAAGAGGGCGAGCAAAGAAGAGTCTCTGCAGATCCAAGTGCAGGATATTTTGGAACAAAACGAGGCTT
TGAAAGCTCAGATTCAACAATTCCATTCCCAGATAGCAGCTCAGACCTCCGCTTCAGTTCTAGCAGAAGA
ATTACATAAAGTGATTGCAGAAAAGGACAAGCAGCTAAAGCAGACTGAAGATTCATTAGCGAATGAACAG
GATCACTTAGCAAGCAAGGAGGAGGAGCTTAAGGATGTACAGAATATGAATTTCTTATTAAAAGCTGAAG
TGCAGAAATTGCAGGCCCTGGCTAATGAGCAGGCTGCTACCGCACATGAGGTGGAGAAGATGCAGAAGAG
TATTCACGTAAAGGAAGATAAAATAAGACTGCTTGAGGAGCAGCTGCAGCACGAAGTTGCCAGCAAAATG
GAAGAATTGAAGATTCTGAGTGAGCAGAATAAAGCATTACAGTCGGAAGTTCAGAAACTGCAGACCGCTG
TTTCTCAGCAGCCTAATAAAGATGTTGTGGAACAAATGGAAAAATGCATTCAAGAAAAAGATGAGAAGTT
AAGGACTGTGGAAGAATTACTGGAGACTGGACTCATTCAGGTGGCCACCAGAGAGGAGGAGCTGAGTGCC
ATAAGAACAGAGAACTCCACCCTGACCAGAGAAGTTCAAGAGTTGAAGGCTAAGCAGAGCGATCAGGTTT
CTTTTGTGTCTCTAATTGAAGATCTTAAGAGAGTGATCCATGAGAAAGATGGACAGATCAAGTCTGTGGA
AGAGCTTCTAGAAGTTGAACTTCTCAAAGTTGCAAATAAGGAGAAAACTGTCCAGCTGTCTGTCACTTCT
CAAGTCCAGGAGCTGCAGAACTTATTAAGAGGCAAGGAAGAGCAGGTGAACAGCATGAAGGCTGCCTTAG
AAGACAGGGACAGAGACCTGAGAGGGAGAGGGACGTGCGCACAGGTGTGTTCGACACCACAATTTGAAGA
ACTTGAAAGTGTGTTGAAAGAAAAGGACAATGAAATTAAGAGAATAGAAGTTAAATTAAAGGACACGGAG
AGTGATGTTTCTAAGATGTCAGAGCTATTAAAGGAGGTACAAGAGGAAAATAAATTCCTTAAGTGCCAGC
TCAGTCACCAGAAGCACCAACAGGCATCTTTTCCCTCTCAGGAAGAATTACAAACAGTAATTTCAGAAAA
AGAGAAAGAAATAACTGATCTCTGCAATGAGTTAGAGTCTTTGAAGAATGCTGTTGAACACCAGAGGAAG
AAAAACAATGAAAGACGGCAACACGTGGAAGCTATTGAGTTAGAGTCCAAAGACCTTCTGAAGAGGTTAT
TTCCAACGGTGTCTGTCCCTTCTAATTTGAATTACAGTGAATGGTTGCGTGGCTTTGAAAAGAAGGCAAA
AGCGTGCGTAGCTGGAACTTCAGACGCAGAGGCGGTCAAGGTTTTGGAGCACAGATTGAAAGAAGCTAGT
GAGATGCACACTTTGCTACAGCTGGAATGTGAAAAATACAAGTCGGTCCTTGCAGAAACAGAAGGGATTT
TGCAAAAACTTCAGCGAAGTGTGGAGCAAGAAGAAAGTAAATGGAAAATTAAAGCTGACGAGTCTCAAAG
GATGATTAAACAGATGCAGTCCTCCTTCACAGCCTCAGAGCGAGAGCTAGAGCGACTAAGACAAGAAAAC
AAAGATATGGAGAATCTGAGAAGAGAAAGAGAGCATTTGGAAATGGAGCTAGAGAAGGCCGAGATGGAGC
GATCGACTTACGTGATGGAAGTCAGAGAGCTCAAGACACAGTTAAATGAAACACACTCAAAACTTCAAAA
TGAACAAACGGAGAGAAAGAAGGTAGCTGATGATTTGCATAAGGCTCAACAGTCCCTGAACTCTATCCAC
TCAAAAATCTCACTGAAAGCTGCTGGAGACACTGTTGTTATTGAGAACAGTGATATTTCCCCAGAAATGG
AGTCTCCTGAGAAAGAGACGATGTCTGTAAGTCTCAATCAGACTGTGACACAGTTACAGCAATTGCTTCA
GGAAGTAAATCAACAACTCACAAAGGAGACATAA

Translation (1247 aa):
MELYESTYFVVLIPSVVITVIFLFFWLFMKETLYDEVLAKQKREQKLISTKTDKKKAEKKKNKKKEIQNG
TLRESDSEHVPRDFKLSDASPAEDEQFVPAPLNVAETSSSVRERKKKEKKQKPSLEEQVIKESDASKIPG
KKVEPVLVTKQPAPPPPLEAAALKKKAGQKKSKNGSEEQDKKVEMLMAPSKEQDVLLSHQDTKQEGGLGK
KKGLSKKQKSENVAVLVDEPLIHATTYIPLDNANSNLMMDKREIIDMIKPDHVEGIQKSGTKKLKIETDK
ENAEVKFKDFLLSLKTMMFSEDEALCVVDLLKEKSGVIKEALKKSNKGELSGLLHQLQEKERLLSAMKED
AAASKERCKQLTQEMMTEKERSSVVIARMKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQEQMEA
EIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLK
VQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESE
QKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQ
DHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASKM
EELKILSEQNKALQSEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSA
IRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQLSVTS
QVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVCSTPQFEELESVLKEKDNEIKRIEVKLKDTE
SDVSKMSELLKEVQEENKFLKCQLSHQKHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRK
KNNERRQHVEAIELESKDLLKRLFPTVSVPSNLNYSEWLRGFEKKAKACVAGTSDAEAVKVLEHRLKEAS
EMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKIKADESQRMIKQMQSSFTASERELERLRQEN
KDMENLRREREHLEMELEKAEMERSTYVMEVRELKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNSIH
SKISLKAAGDTVVIENSDISPEMESPEKETMSVSLNQTVTQLQQLLQEVNQQLTKET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH