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Report for CCDS29739.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29739.1 Public Mus musculus 19 Mlana 23 108 98 CCDS HistoryNCBI Gene:77836Re-query CCDS DB by CCDS ID:29739.1Re-query CCDS DB by GeneID:77836See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 29739.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025719.4 ENSMUSP00000025719.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025719.4Link to Ensembl Protein Viewer:ENSMUSP00000025719.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000025719Re-query CCDS DB by Protein ID:ENSMUSP00000025719
Original member Current member NCBI NM_029993.1 NP_084269.1 Accepted alive Link to Nucleotide Sequence:NM_029993.1Link to Protein Sequence:NP_084269.1Re-query CCDS DB by Nucleotide ID:NM_029993Re-query CCDS DB by Protein ID:NP_084269Link to BLAST:NP_084269.1

Chromosomal Locations for CCDS 29739.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 29700100 29700170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29704620 29704716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29706808 29706921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 29708174 29708233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (342 nt):
ATGCCCCAAGAAGACATTCACTTTGGTTATCCCAGGAAGGGGCACAGACGCTCCTATGTCACTGCTGAAG
AGGCCGCAGGGATCGGCATCCTGATCGTGGTCCTGGGGATTGCTCTGCTTATCGGCTGCTGGTACTGTAG
AAGACGAAGTGGATACAGAACCTTGATGGACAAAAGGCGTCATATTGGTATTCAAAAAACCTCAAGGGAA
AGATGCTCATGTGAGAGCCCTGATCACCAGGACAGCCGACTGTCTTCTCAAGAGAAATCCCATCAGCCCG
TGGTTCCCAACGCTCCGCCTGCCTATGAGAAGCTCTCTTCACCGCCACCTTATTCACCCTGA

Translation (113 aa):
MPQEDIHFGYPRKGHRRSYVTAEEAAGIGILIVVLGIALLIGCWYCRRRSGYRTLMDKRRHIGIQKTSRE
RCSCESPDHQDSRLSSQEKSHQPVVPNAPPAYEKLSSPPPYSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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