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Report for CCDS84207.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84207.1 Public Mus musculus 16 Cebpd 23 108 98 CCDS HistoryNCBI Gene:12609Re-query CCDS DB by CCDS ID:84207.1Re-query CCDS DB by GeneID:12609See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84207.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096232.5 ENSMUSP00000148145.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096232.5Link to Ensembl Protein Viewer:ENSMUSP00000148145.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000096232Re-query CCDS DB by Protein ID:ENSMUSP00000148145
Original member Current member NCBI NM_007679.4 NP_031705.3 Accepted alive Link to Nucleotide Sequence:NM_007679.4Link to Protein Sequence:NP_031705.3Re-query CCDS DB by Nucleotide ID:NM_007679Re-query CCDS DB by Protein ID:NP_031705Link to BLAST:NP_031705.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031705.3 268 Q00322 268 100% 0 0

Chromosomal Locations for CCDS 84207.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 15887325 15888131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (807 nt):
ATGAGCGCCGCGCTTTTCAGCCTGGACAGCCCGGTGCGCGGCACACCCTGGCCCACAGAACCCGCGGCCT
TCTACGAGCCAGGCAGGGTGGACAAGCCCGGCCGAGGGCCCGAGCCAGGGGATCTGGGGGAGCTGGGCTC
CACGACTCCTGCCATGTACGACGACGAGAGCGCCATCGACTTCAGCGCCTACATTGACTCCATGGCCGCC
GTGCCCACCCTAGAGCTGTGCCACGACGAACTCTTCGCCGACCTCTTCAACAGCAACCACAAAGCGGCCG
GCGCGGGCGGCCTGGAGCTGCTGCAGGGCGGCCCTACGCGACCCCCGGGTGTGGGGTCTGTCGCTAGGGG
GCCGCTCAAGCGCGAACCCGACTGGGGCGACGGCGACGCGCCGGGCTCCCTGCTGCCGGCGCAAGTGGCG
GTGTGCGCGCAGACAGTGGTGAGCTTGGCGGCCGCGGCTCAGCCCACTCCACCCACTTCGCCGGAGCCTC
CTCGAGGCAGCCCGGGGCCGAGCCTCGCGCCCGGCACAGTCCGAGAAAAGGGCGCGGGCAAGAGGGGTCC
GGACCGCGGCAGCCCGGAGTACCGGCAGCGGCGCGAGCGCAACAACATCGCTGTGCGCAAGAGCCGCGAC
AAGGCCAAGCGCCGCAACCAGGAGATGCAGCAGAAGCTGGTGGAGTTGTCGGCCGAGAACGAGAAGCTGC
ATCAGCGCGTGGAGCAGCTCACCCGGGACCTGGCTGGCCTCCGGCAGTTCTTCAAAAAACTGCCCAGCCC
GCCTTTCCTGCCGCCCACCGGCGCCGACTGCCGGTAA

Translation (268 aa):
MSAALFSLDSPVRGTPWPTEPAAFYEPGRVDKPGRGPEPGDLGELGSTTPAMYDDESAIDFSAYIDSMAA
VPTLELCHDELFADLFNSNHKAAGAGGLELLQGGPTRPPGVGSVARGPLKREPDWGDGDAPGSLLPAQVA
VCAQTVVSLAAAAQPTPPTSPEPPRGSPGPSLAPGTVREKGAGKRGPDRGSPEYRQRRERNNIAVRKSRD
KAKRRNQEMQQKLVELSAENEKLHQRVEQLTRDLAGLRQFFKKLPSPPFLPPTGADCR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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