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Report for CCDS83737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83737.1 Public Mus musculus 10 Tle6 23 108 98 CCDS HistoryNCBI Gene:114606Re-query CCDS DB by CCDS ID:83737.1Re-query CCDS DB by GeneID:114606See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83737.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000142948.7 ENSMUSP00000117287.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000142948.7Link to Ensembl Protein Viewer:ENSMUSP00000117287.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000142948Re-query CCDS DB by Protein ID:ENSMUSP00000117287
Original member Current member NCBI NM_001346695.1 NP_001333624.1 Accepted alive Link to Nucleotide Sequence:NM_001346695.1Link to Protein Sequence:NP_001333624.1Re-query CCDS DB by Nucleotide ID:NM_001346695Re-query CCDS DB by Protein ID:NP_001333624Link to BLAST:NP_001333624.1

Chromosomal Locations for CCDS 83737.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 81591035 81591139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81591260 81591336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81591886 81592039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81592713 81592854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81593995 81594242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81594327 81594585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81595208 81595245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81595323 81595375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81595480 81595555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81595845 81596255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81598611 81598656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81599077 81599138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 81600035 81600079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1716 nt):
ATGACTTCCCACAGACAGAGCAGTGACACCTTTGGTGGAATTTTGCCTTCCACCTTATCCAGTCGGTATT
TGTCCATCGTGAACCAGCTTCCGGAGGAGTTCAGCAGCGTCGTCTCTGAAATGATGGTTCACCTAGAGAA
CATCTTCAGCCTGGCAGAAAACTTCTTCCAGGCGATAGAGCGCTTCAGTAGAACCCCAGACCTCCTGGAG
AGGAACAAGATGAGTATTGGTGTTGGGGCTGAAGGGGACAGTTGGCCATGTCATGTGTCTCATGAGGCCC
CAATGGGCTCTGCCCAGACCACAGAGAACTCAGCTAAGGAAGAAGACAAACAGGTCCCAGAGTCTGCAGC
CCTCCAGCACCCCAAGTTCAAAAGCACCCCGGGGCCTCAGCTGCCCACCAGACGTCGGTTCCTCTCAGAG
AGTGATGAGCTCCAGGACCCACAGCCGGTCTGGGACGCGGAGCCCCAGTTCTGTCAAGGCTTCCTGATCC
AGGGACTCTGGGAACTTTTCATGGACAGCCGCCAAAAGAACCAACAGGAACACGGGGGTGAGGATTCCTC
ACAGGAAAGCAAAGATTCAGGCCTGTGTGACTTTAAACCAGAACCTCAGCCCAGGCACAGAAACAGCCTG
AGTGACTCTGCTCTTCTAGATTATTACCAAGAAGACGTCAGTCGGCCCCAACCTGAGACGCAGGAATCTT
CTGGAAGAGCTGATAAATTTCTGAAGCCCTTGTCCTGGGGCTCTGAAGTCTTAGAGAGCAGCTGTAATCA
GCCTAGCACAGCACTCTGGCAATTAGAGAGGTTCACTGTCCCCCAAGCACTGCAGAAGGTGCGTGTGCTG
AAGCACCAGGAACTGCTATTGGTGGTAGCTGTGAGCTCCTTCACGCGGCACGTCTTCACCTGCAGCCAGA
GCGGCATCAAGGTGTGGAACCTCGTGAACCAGGTGGCCGAGGACAGAGACCCAGAAAGCCACTTGAAATG
CAGCGTCCAGGACAACAAGGTGTACCTGCGCACCTGCCTGCTGTCCTCCAACAGCAGGACCCTGTTCGCG
GGTGGATACAACTTACCTGGCGTGATCGTGTGGGACCTGGCAGCCCCATCCCTGTATGAGAAGTGCCAGC
TGCCCTGCGAGGGCCTGTCCTGCCAGGCACTGGCCAACACAAAGGAAAACATGGCCCTTGCCGGCTTCAC
AGATGGCACGGTCAGGATATGGGACCTACGGACTCAGGAAATAGTCAGGAACCTCAAAGGCCCTACCAAT
TCGGCCAGGAACCTTGTGGTCAAAGATGACAACATCTGGACAGGGGGTCTGGACGCCTGCCTGCGATGCT
GGGACCTGCGGATGGCCAAGGTGTCACTGGAGCATCTGTTCCAGTCCCAGATCATGAGCCTGGCTCACAG
TCCGACCGAAGACTGGCTGCTGCTGGGCCTGGCCAATGGCCAGCACTGCCTGTTCAACAGCAGGAAGAGG
GACCAGGTGCTCACTGTGGACACCAAGGACAACACCATCTTAGGCCTCAAGTTCTCCCCAAATGGCAAGT
GGTGGGCGAGCGTCGGTATGGGCAACTTCATCACGGTCCACAGCATGCCCACCGGAGCAAAACTGTTCCA
GGTCCCCGAGGTTGGCCCTGTCAGATGCTTCGACATGACTGAGAACGGCAGGCTCATCATCACAGGATCC
AGGGACTGTGCCTCGGTGTACCACATCAAGTACTGA

Translation (571 aa):
MTSHRQSSDTFGGILPSTLSSRYLSIVNQLPEEFSSVVSEMMVHLENIFSLAENFFQAIERFSRTPDLLE
RNKMSIGVGAEGDSWPCHVSHEAPMGSAQTTENSAKEEDKQVPESAALQHPKFKSTPGPQLPTRRRFLSE
SDELQDPQPVWDAEPQFCQGFLIQGLWELFMDSRQKNQQEHGGEDSSQESKDSGLCDFKPEPQPRHRNSL
SDSALLDYYQEDVSRPQPETQESSGRADKFLKPLSWGSEVLESSCNQPSTALWQLERFTVPQALQKVRVL
KHQELLLVVAVSSFTRHVFTCSQSGIKVWNLVNQVAEDRDPESHLKCSVQDNKVYLRTCLLSSNSRTLFA
GGYNLPGVIVWDLAAPSLYEKCQLPCEGLSCQALANTKENMALAGFTDGTVRIWDLRTQEIVRNLKGPTN
SARNLVVKDDNIWTGGLDACLRCWDLRMAKVSLEHLFQSQIMSLAHSPTEDWLLLGLANGQHCLFNSRKR
DQVLTVDTKDNTILGLKFSPNGKWWASVGMGNFITVHSMPTGAKLFQVPEVGPVRCFDMTENGRLIITGS
RDCASVYHIKY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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