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Report for CCDS29326.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29326.1 Public Mus musculus 18 Fam210a 23 108 98 CCDS HistoryNCBI Gene:108654Re-query CCDS DB by CCDS ID:29326.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29326.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042852.6 ENSMUSP00000045927.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042852.6Link to Ensembl Protein Viewer:ENSMUSP00000045927.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000042852Re-query CCDS DB by Protein ID:ENSMUSP00000045927
Original member Current member NCBI NM_153794.4 NP_722489.1 Accepted alive Link to Nucleotide Sequence:NM_153794.4Link to Protein Sequence:NP_722489.1Re-query CCDS DB by Nucleotide ID:NM_153794Re-query CCDS DB by Protein ID:NP_722489Link to BLAST:NP_722489.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722489.1 273 Q8BGY7 273 100% 0 0

Chromosomal Locations for CCDS 29326.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 68268719 68268952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 68272563 68272674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 68275762 68276237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGCAATGGAATGTACCACGGACTATGTCTCGGCTGGCACTCAGGACATTCGTGGAAGCACAGAAAGCCA
GGCTCTTTGATCACCATTGGCGCATAAAAGGGCCGTTACTTGTGCATAGAGGTGAATACAGAGTGGCTTG
GACACCACACCTTCGAAAGCAGTGGCTACATTTATCTGCTGTTCAGTGCCTTGCAAAGCAAAGGAATCTC
TTAGATGCTCAGCCGCCTCAGCTGGGGACCCTTCGCCAGGAACGATGGGAGCAGGACATTTTATCCAAGA
GGGTTTTATCTTCCAGTTCCACATCCCAGGAAACTCCATCAGAAAAGAAGGAAGAAACAGACCCTTTACA
AGACAAATCTATCAGTCTGTATCAACGGTTTAAGAAGACATTTAGACAATATGGAAAAGTTTTAATTCCT
GTGCACCTAATAACTTCTGGGATTTGGTTTGGAACATTTTACTATGCAACTATAAAAGGAGTGAATGTCA
TCCCCTTCCTAGAGGTCATTGGGTTACCTGACAGTATCGTGGACATCCTGAAAAACTCCCAAAGTGGGAA
TGCGCTGACAGCCTACGCCATGTTTAAGATCGCAACGCCTGCCCGCTACACCGTGACCTTGGGAGGAACC
TCCTTTACCGTGAAGTATTTGCGAAGTCACGGCTACATGTCAACCCCACCGCCTGTCAAGGAGTACTTGC
AGGGCAGAATGGAAGAGACGAAGGAGCTCATCACAGAGAAAATGGAGGAGACAAAGGACAGACTCACTGA
GAAGTTACAAGAAACCAAAGGAAAAGTGTCCTTTAAGAAAAAAGTGGAATGA

Translation (273 aa):
MQWNVPRTMSRLALRTFVEAQKARLFDHHWRIKGPLLVHRGEYRVAWTPHLRKQWLHLSAVQCLAKQRNL
LDAQPPQLGTLRQERWEQDILSKRVLSSSSTSQETPSEKKEETDPLQDKSISLYQRFKKTFRQYGKVLIP
VHLITSGIWFGTFYYATIKGVNVIPFLEVIGLPDSIVDILKNSQSGNALTAYAMFKIATPARYTVTLGGT
SFTVKYLRSHGYMSTPPPVKEYLQGRMEETKELITEKMEETKDRLTEKLQETKGKVSFKKKVE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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