NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS28943.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28943.1 Public Mus musculus 17 Ankrd12 23 108 98 CCDS HistoryNCBI Gene:106585Re-query CCDS DB by CCDS ID:28943.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28943.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038116.12 ENSMUSP00000039035.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038116.12Link to Ensembl Protein Viewer:ENSMUSP00000039035.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000038116Re-query CCDS DB by Protein ID:ENSMUSP00000039035
Original member Current member NCBI NM_001025572.1 NP_001020743.1 Accepted alive Link to Nucleotide Sequence:NM_001025572.1Link to Protein Sequence:NP_001020743.1Re-query CCDS DB by Nucleotide ID:NM_001025572Re-query CCDS DB by Protein ID:NP_001020743Link to BLAST:NP_001020743.1

Chromosomal Locations for CCDS 28943.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 65970152 65970337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65972297 65972392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65976021 65976164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65979502 65979600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 65982836 65987493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 66024076 66024223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 66027252 66027394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 66031371 66031571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 66037493 66037639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 66042533 66042601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 66049786 66049933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 66052954 66053040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6126 nt):
ATGCCCAAATCTGGGTTCACAAAACCAGTTCAGAGTGAAAATTCTGACAGTGACAGCAGTATGGTGGAGA
GGCCATATGGAAGAAAGAGTAAAGACAAGATTGCATCTTACAGCAAAACTTCAAAAATTGACCGAGGTGA
TATGGGCAAGGAAATGAGAGAGAAACCATCCATGAAACGAAAGCTGCCTTTTACAGTCAGCCCATCGAGA
AATGAGGAGCGCGACTCAGACACAGATTCAGACCCAGGACATACAAGTGAAAATTGGGGGGAGAGACTTA
TATCTTCTTACAGGACATACTCAGAAAAAGAAGGTCCAGAGAAGAAGAAAACAAAAAAAGAAGCTGGAAC
TAAGAAGTCCACCCCAGTTAGCATTCTTTTTGGTTATCCACTTTCTGAACGAAAGCAGATGGCACTCCTA
ATGCAGATGACAGCAAGGGACAACAGCCCAGATTCCACACCAAGTCATCCGTCACAGGCAACGCCAGCCC
AGAAGAAAACGCCCAGCTCTTCATCTCGACAGAAAGATAAAATTAATAAAAGAAATGAGCGTGGCGAAAC
TCCTTTACACATGGCCGCTATTCGAGGAGACGTGAAGCAAGTCAAAGAGTTAATTAGTTTAGGGGCAAAC
GTCAATGTGAAGGACTTTGCAGGTTGGACCCCTTTGCATGAAGCTTGCAATGTTGGCTATTACGATGTTG
CTAAGATACTGATAGCAGCTGGCGCAGACGTTAACACACAAGGACTGGATGATGACACCCCGCTCCATGA
CTCTGCCAGCAGTGGCCATAGAGACATAGTGAAGTTGTTGCTTCGTCATGGCGGGAATCCATTCCAAGCT
AATAAACATGGAGAACGGCCAGTGGATGTGGCAGAGACAGAGGAGTTGGAGTTGCTGCTAAAAAGAGAGG
TGCCTTTGTCTGGCGATGATGAAAGTTATACAGATTCAGAAGAGGCTCAGTCTGTAAATCCTTCTAGTGT
TGATGAAAATATTGACTCAGAGACAGAGAAAGACTCTTTCGTCTGTGGCAGTAAAATCCTCCCAAGCAAA
GCCCCGCTGCCTTCTGCACTGGATGAGTATGAGTTCAAAGATGATGATGAAGAAGAGATAAGTAAGATGA
TTGACGACAGGCACATTCTTAGGAAAGAACAGCGGAGAGAGAATGAATCTGAAGCAGAAAGGAGTGGTCT
GTTTGCAAAACAGGAGAAAACCTTCTATTCTAAGTCATTTAAAACAAAAAAACAGAAGCCGTCAAGGGTT
CTGTGCTCCAGTACTGAAAGCTCTGATGAAGAGGGTCTTCAGAACAGAAAGATTTCTACTGCTTGTTCTG
TTGCTGAATCATCACATCCTGATATGCAAGCCAAAAAAGAATATGAATACAAACAGAAAGGCAAAGTTAA
AAGAAAATTAAAAAATCAGAATAAAAACAAAGAGAACCAAGAGCTGAAACAAGAAAAAGAGGGGAAAGAA
AATAGCAGGATAGCAACCTTGACAGTTAATACTGCGCTGGATTGTTCAGAAAAATACAGAGAGGAGGGGA
ACTTCAGGAAATCTTTTAGCCCAAAGGATGATACTTCATTACACTTATTTCATATTTCCACTGGTAAATC
TCCCAAACATTCCTGTGGATTAAGTGAAAAACAGACACCACTGAAGCAAGAACACACGAAAGCATGCATA
TCCCCAGGAAGTTCTGAAATGTCATTACAGCCTGATCTCACTCGGTATGATAATGCAGAACCTGAAAGTT
CAAATGTCAAATCTTATAAGCACAAGGAAAAAAACAAACAGCAGAAAGATTTTCACATAGAGTTTGGTGA
AAAATCAAATGCCAAAATTAAAGATGAAGATCATAATCCAGCATTTGAAAACTCAGACTGCACACTGAAG
AAGATGGATAAAGAGGGTAAAACATTAAAAAAACATAAATTAAAACATAAAGAGAAGGATAAAGAAAAGC
ACAAAAAGGAAGTTGAAGGTGAAAAGGAAAAATATAAAAATAAAGACAATGCTAAAGAGCTACAGAGGAG
CATCGAATTTGACAGAGAGTTTTGGAAAGAAAATTTTTTTAAAAGTGATGAAACTGAGGATCTCTTTTTA
ACTATGGAACATGAGTCCATAATAGAAAAAAAGACAAAAATGGAAAAAAACATGAAAGATGATAGGTCAG
CTAAAGAAAAGCATGTCTCAAAAGAAAGGAACTTTAAAGAAGAACGGGAAAAGACTAAAAAGGAAAATGA
AAAATCTCTTAGGGAAGAAAAGGTAAAAGATCCGAAAGAAGAAAAAGACAGTGTATCCACAGAGAAGGAG
GCCGAGTGCTGTTCGGTGGGTGTCAGTGTGAGCCAGGAAGCTGCAGGGCTGCATTCATCAGAAAAGGAAA
TGGATGCTGAGAAGCAAGAAAGACACACAAAAGAGAGGGAAAAGTCTGATCGGCGCTTTCAGACTAAGGA
GAAAGAGCTTGACAGGAACGAGAGGAAATTTTCTGAAAAAGAAAAGAAGATAAAACATGAACATAAGTCA
GAAAGAGAGAAGCTGGATTTCAGTGACTGCACTGACAGAGTGAGAGAGAAGGACAAGCTGTACTCACACC
AGACAGAAAGGTGCCACAAGGACAGCGAGAAGCTGAAAAACACTGTCAGAAAGACTGATGACAGAGAGAG
GAACAGAGAAAAGGCGGATAGAAAGCACGACAGAGAGAAACCTGAACGAGAGAGGTACTTAGCAGAAAAC
AAAGAAAAGCACTTAGAGAAAAGAAAGCAATCTGACAGCAGTGAGTATTCCAAATCAGAGAAGGTCAGAA
CTAAAGACAGAGACAGGGAAGGAGAGAAGAAGGAGAAACTTAGAGATAAAGAAAGTGTAAATGTAACTAA
CTTGAAACATTTGCAGGAAGAGAGAAAGTCCAGTACAGGAGACAGCAGTGGTAAAACCCAGCATGAGAAA
GCTCTGTCCCTTAAAGAAAGGGCAAGAGATGAGCCTTTGAAAACTCCAGATGGAAAAGAGAAAGATAAAA
AGGATATAGACAGATACAAAGAGCGAGACAAGCGTAAAGATAAAGCCCAGCTAAATACTTTAATCAGACT
AAAATCTGAAACAGAGAAGCTTAAACCTAAATTATCACCAGCATCAAAAGATACTCGACCTAAAGAAAAG
AGGTTAGTAAATGATGATTTAATGCAGACAAGTTTTGAACGAATGCTTAGCCTTAAAGACCTAGAAATAG
AACAGTGGCACAGAAAACATAAGGAAAAAATTAAGCAAAAGGAAAAAGAACGATTACGCAATCGTACTTG
TTTAGAACTTAAAGTAAAAGATAAAGAAAAAACAAAACATGCACCCACAGAATCCAAAAGTAAAGAACTT
ACCAGGTCAAGAAGTTCAGAGTTGACTGATGTTTATAGCAAGGAGAAACAATCTAAAGATGTTGGCAGTA
ATCGCTCACAATCTGTTGACAACAGAAATGTATTGAATTTAGGAAAGCCATCCTACATTTCAGAGAGTGG
CTCCAACCGGTCTCCTAGGTCGGAAGGTGAGAGGCTGGGTCTTAGCTCTAGGTCTGTGTCCATGCTTTCT
GTTGCTAGTTCAGAAGACTCTTGCCATACAGTGACAACCCCAAGGCCTCTCGTTGAGTATGACTCTGACT
TTATGTTAGAGGGCTCGGAATCTCAGTTGTCATTTTCTCAGTCACCTTTTTTGCCAAATGCCAAATCTCC
AGCTCTTTATGAAAGAGAGCTGGAGGGTCTCACTGAACTACCAGACCGACTTAAACCACCATATACAAAC
AGACTTCCAGTGTGCCATCTCAGGTCATCTTCTGTGGAAGATGTTAAACTAATTACTAATGAGGTAAGAC
CTGCTGTAGAAATTAGAAGATGCAGTATGCCCTCAGTTATCTGTGAGCCCATAAAACATTTCCAAGTATC
AGAAGAAAGCAGTCAAGGCAACTTAGCTGTTCCCAGAGAGACCTGTCTGTCTCCCAAGCCTGAAGTGTCT
TCAGCAGTACCTGAGAGGGGCCTTTCGCATGTGTCTGACTTACATCCTAACTGTACAGGCTCTCCAACGA
GGTCTGCAAACAGCAGCTATATTTCATCTGATGTAAATGTAATCAAGAGTGCAACTCTTGTGGGTACACT
GATTGACAGTTCGATGCATTTGGAACCGTCTAATCAGGTTGGAGTGATTCCAAGTAAATCATGGGAGACG
CCTGTTGATAAACTGGAGTCTTTAAGCACCAATGACTTCATCTGTCCAGATTCTAATATATCTGATCAAG
ATTCCTCTGCTCAGAGTTTTTATAATTCAGAAAACAAAATGTTAAGAGAACAAAATACTGACTGCTTACC
TCCGCACCAGCCTGAACTGCCAGGAAACTCATGTGCTCAGGACCCAGCATCCTTTCTGTCTTCACCTCAG
CCCTGCTCTTTTTCCAACCAACCACTGGCAGGTGCTGACTCTGTTCCGAAACCCGTGTCTTTGTCATATG
TTGTCAGTCAAGAGCCAGGTGTTTTACAACAGAAAAGTGCAGCTCAGATGGCCAGTTCTGTTTTAGATAG
TGATAATAACTTTCCAGAGGATGTGGAAAATACATTTGTCTTAGCAGACATTCAGAAGACAAATTCTTTT
TTACCAGCTTACTCTGAAAGCACTGTGCAAGAAGCACTCCCAAGCTTTGAGAAGGCCAATACTTTGCTTG
TGTTGCCATCAGAAAAGGACTTCAATGGGAGTGATACTGCTCAGCCAAACACACATTATGCATTTAGCAA
ACTCACATACAAGTCTTCCAATAGCCAGGAAATTGAGAAGGGCCCAGATGATACTCAAATCATTTCACAT
GAAAAGGAAAACAAATTACAAAGTTTGGTCTTAACTCAGTTGAGTAAATGTGATTCTGATTTGTATGAGA
TGAATGCAGGGCTGCCAAAAGGAAACCTGAATGAACAGGATAACCCAAAGCATGGTCTTGACAGCGAAAA
GTACTCGCTTTCCACTGAAGATGAAGAATCTCAGCAGAGCACCTTATCAAGTGTGGAAAACCATTCACAG
CAGTCGGCCCAACCAGAGATGCATAAATATGACCAGCTTAGTAAAGTAGAACTAGAAGAAAATGCCGAAG
ACGATAAAACTGAAAACCAGACCCCTCAAAGAGTGACTAGAAACAAAGCAAGCACAGTGGTCAATCCAAG
CAAGCCCATGCTTGCTGGCTGTGCCCTTGTAGCAGAGAAAGATAACGAGTCCTCCCCTAGGGGACGAATC
AGACTCACTGAAGAGGATGATCCTCAGATCCACCATCCTCGGAAGAGGAAAGTGTCACGGGTTCCTCAGC
CTGTGCAAGTGAGCCCCTCTTTACTGCAAGCAAAGGAGAAAACTCAGCAGTCTCTAGCAGCCATTGTAGA
TTCTCTGAAGTTAGATGAGATTGAGCCATACAGTTCTGAGAGAGCAAATCCATATTTTGAATATTTGCAC
ATAAGAAAAAAAATTGAAGAAAAACGCAAGTTGCTATGTAGCGTTATCCCTCAAGCTCCTCAGTATTATG
ATGAATACGTAACGTTTAATGGATCCTATCTCCTGGATGGAAACCCCTTAAGCAAGATTTGTATTCCTAC
AATCACACCACCACCTTCGCTGTCAGATCCACTTAAAGAGCTCTTTCGGCAACAGGAAGTAGTAAGGATG
AAACTGCGTTTGCAACATAGTATTGAAAGGGAAAAACTTATTGTATCCAATGAACAAGAAGTTCTGCGAG
TTCATTACAGAGCTGCAAGAACACTGGCCAATCAAACACTGCCATTTAGTGCTTGTACTGTCTTACTGGA
TGCAGAAGTGTACAATGTGCCCTTGGACTCACAGTCTGATGACAGCAAAACTTCTGTGAGAGATCGATTT
AATGCAAGACAGTTCATGTCCTGGTTGCAAGATGTGGACGATAAATTTGACAAGCTAAAGACCTGTCTCT
TAATGAGGCAGCAACACGAAGCTGCAGCTTTAAATGCCGTCCAGAGGCTAGAATGGCAGCTCAAACTCCA
GGAGCTGGACCCTGCCACGTATAAGTCTCTCAGTATTTATGAAATCCAGGAGTTTTATGTTCCCCTTGTT
GATGTTAATGATGATTTTGAACTGACTCCTATATAG

Translation (2041 aa):
MPKSGFTKPVQSENSDSDSSMVERPYGRKSKDKIASYSKTSKIDRGDMGKEMREKPSMKRKLPFTVSPSR
NEERDSDTDSDPGHTSENWGERLISSYRTYSEKEGPEKKKTKKEAGTKKSTPVSILFGYPLSERKQMALL
MQMTARDNSPDSTPSHPSQATPAQKKTPSSSSRQKDKINKRNERGETPLHMAAIRGDVKQVKELISLGAN
VNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQA
NKHGERPVDVAETEELELLLKREVPLSGDDESYTDSEEAQSVNPSSVDENIDSETEKDSFVCGSKILPSK
APLPSALDEYEFKDDDEEEISKMIDDRHILRKEQRRENESEAERSGLFAKQEKTFYSKSFKTKKQKPSRV
LCSSTESSDEEGLQNRKISTACSVAESSHPDMQAKKEYEYKQKGKVKRKLKNQNKNKENQELKQEKEGKE
NSRIATLTVNTALDCSEKYREEGNFRKSFSPKDDTSLHLFHISTGKSPKHSCGLSEKQTPLKQEHTKACI
SPGSSEMSLQPDLTRYDNAEPESSNVKSYKHKEKNKQQKDFHIEFGEKSNAKIKDEDHNPAFENSDCTLK
KMDKEGKTLKKHKLKHKEKDKEKHKKEVEGEKEKYKNKDNAKELQRSIEFDREFWKENFFKSDETEDLFL
TMEHESIIEKKTKMEKNMKDDRSAKEKHVSKERNFKEEREKTKKENEKSLREEKVKDPKEEKDSVSTEKE
AECCSVGVSVSQEAAGLHSSEKEMDAEKQERHTKEREKSDRRFQTKEKELDRNERKFSEKEKKIKHEHKS
EREKLDFSDCTDRVREKDKLYSHQTERCHKDSEKLKNTVRKTDDRERNREKADRKHDREKPERERYLAEN
KEKHLEKRKQSDSSEYSKSEKVRTKDRDREGEKKEKLRDKESVNVTNLKHLQEERKSSTGDSSGKTQHEK
ALSLKERARDEPLKTPDGKEKDKKDIDRYKERDKRKDKAQLNTLIRLKSETEKLKPKLSPASKDTRPKEK
RLVNDDLMQTSFERMLSLKDLEIEQWHRKHKEKIKQKEKERLRNRTCLELKVKDKEKTKHAPTESKSKEL
TRSRSSELTDVYSKEKQSKDVGSNRSQSVDNRNVLNLGKPSYISESGSNRSPRSEGERLGLSSRSVSMLS
VASSEDSCHTVTTPRPLVEYDSDFMLEGSESQLSFSQSPFLPNAKSPALYERELEGLTELPDRLKPPYTN
RLPVCHLRSSSVEDVKLITNEVRPAVEIRRCSMPSVICEPIKHFQVSEESSQGNLAVPRETCLSPKPEVS
SAVPERGLSHVSDLHPNCTGSPTRSANSSYISSDVNVIKSATLVGTLIDSSMHLEPSNQVGVIPSKSWET
PVDKLESLSTNDFICPDSNISDQDSSAQSFYNSENKMLREQNTDCLPPHQPELPGNSCAQDPASFLSSPQ
PCSFSNQPLAGADSVPKPVSLSYVVSQEPGVLQQKSAAQMASSVLDSDNNFPEDVENTFVLADIQKTNSF
LPAYSESTVQEALPSFEKANTLLVLPSEKDFNGSDTAQPNTHYAFSKLTYKSSNSQEIEKGPDDTQIISH
EKENKLQSLVLTQLSKCDSDLYEMNAGLPKGNLNEQDNPKHGLDSEKYSLSTEDEESQQSTLSSVENHSQ
QSAQPEMHKYDQLSKVELEENAEDDKTENQTPQRVTRNKASTVVNPSKPMLAGCALVAEKDNESSPRGRI
RLTEEDDPQIHHPRKRKVSRVPQPVQVSPSLLQAKEKTQQSLAAIVDSLKLDEIEPYSSERANPYFEYLH
IRKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDGNPLSKICIPTITPPPSLSDPLKELFRQQEVVRM
KLRLQHSIEREKLIVSNEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRF
NARQFMSWLQDVDDKFDKLKTCLLMRQQHEAAALNAVQRLEWQLKLQELDPATYKSLSIYEIQEFYVPLV
DVNDDFELTPI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH