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Report for CCDS25135.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25135.1 Public Mus musculus 11 Tmem98 23 108 98 CCDS HistoryNCBI Gene:103743Re-query CCDS DB by CCDS ID:25135.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25135.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040865.8 ENSMUSP00000042825.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040865.8Link to Ensembl Protein Viewer:ENSMUSP00000042825.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000040865Re-query CCDS DB by Protein ID:ENSMUSP00000042825
Original member Current member NCBI NM_029537.2 NP_083813.1 Accepted alive Link to Nucleotide Sequence:NM_029537.2Link to Protein Sequence:NP_083813.1Re-query CCDS DB by Nucleotide ID:NM_029537Re-query CCDS DB by Protein ID:NP_083813Link to BLAST:NP_083813.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083813.1 226 Q91X86 226 100% 0 0

Chromosomal Locations for CCDS 25135.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 80812559 80812689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 80814219 80814350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 80815666 80815699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 80817503 80817618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 80819930 80819989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 80821212 80821419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGGAGACTGTGGTGATCGTCGCCATAGGTGTGCTGGCCACCATTTTCCTGGCCTCATTTGCTGCTTTGG
TGGTGGTCTGTAGGCAGCGTTACTGCCGGCCTCGAGACCTACTACAGCGTTATGATTCCAAGCCCATCGT
GGACCTCATTGGTGCTATGGAGACGCAGTCTGAACCCTCCGAGCTGGAGCTGGATGATGTCGTCATCACC
AACCCCCACATCGAGGCCATCCTGGAGAATGAGGACTGGATCGAAGATGCCTCGGGCCTCATGTCCCACT
GCATCGCCATCTTGAAGATTTGTCACACTCTGACAGAAAAACTCGTTGCCATGACAATGGGTTCTGGGGC
CAAGATGAAGACGTCAGCAAGTGTCAGTGACATCATTGTGGTGGCCAAACGGATTAGCCCCAGAGTGGAC
GACGTCGTGAAGTCAATGTACCCTCCACTGGACCCCAAGCTCCTGGATGCACGGACAACCGCCCTGCTGC
TGTCCGTTAGTCACTTGGTGCTAGTGACCAGGAACGCCTGCCATCTAACCGGGGGCCTGGACTGGATTGA
CCAATCACTGTCTGCCGCTGAGGAGCACCTGGAAGTCCTTCGAGAGGCAGCCCTGGCTTCTGAGCCAGAT
AAAAGCCTCCCCAACCCTGAGGGCTTCCTGCAGGAACAGTCGGCCATTTAA

Translation (226 aa):
METVVIVAIGVLATIFLASFAALVVVCRQRYCRPRDLLQRYDSKPIVDLIGAMETQSEPSELELDDVVIT
NPHIEAILENEDWIEDASGLMSHCIAILKICHTLTEKLVAMTMGSGAKMKTSASVSDIIVVAKRISPRVD
DVVKSMYPPLDPKLLDARTTALLLSVSHLVLVTRNACHLTGGLDWIDQSLSAAEEHLEVLREAALASEPD
KSLPNPEGFLQEQSAI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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