CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS24156.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
24156.1 |
Public |
Mus musculus |
10 |
Slc6a15 |
23 |
108 |
98 |
|
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 24156.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000074204.11 |
ENSMUSP00000073829.4 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000179636.2 |
ENSMUSP00000136676.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001252330.1 |
NP_001239259.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_001358821.1 |
NP_001345750.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_175328.3 |
NP_780537.1 |
Accepted |
alive |
|
Chromosomal Locations for CCDS 24156.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2190 nt): ATGCCTAAGAATAGCAAAGTGGTAAAGAGAGATTTGGATGATGATGTCATTGAATCTGTCAAAGACCTCC TGTCCAACGAAGACTCAGTGGAAGAGGTTTCTAAGAAGAGTGAACTAATTGTCGATGTTCAGGAAGAGAA AGATACAGATGCTGAAGATGGATCTGAAGCTGATGATGAAAGGCCAGCCTGGAACAGTAAGCTGCAATAC ATTCTGGCCCAAGTTGGATTTTCTGTAGGTCTGGGGAATGTGTGGCGGTTCCCATACCTCTGCCAAAAGA ATGGTGGTGGTGCATATCTTTTGCCGTATTTAATACTACTTCTGGTGATAGGAATTCCACTCTTTTTCCT GGAACTTTCTGTGGGTCAAAGAATTCGAAGAGGCAGCATTGGGGTTTGGAATTACATAAGCCCTAAATTG GGTGGGATTGGCTTCGCAAGCTGTGTAGTGTGCTATTTTGTGGCTCTCTACTACAATGTCATCATTGGCT GGACATTATTTTACTTTTCTCAGTCTTTTCAACAACCTCTTCCTTGGGATCAATGCCCCCTGGTGAAAAA CGCATCTCATACTTATGTTGAGCCAGAATGTGAACAAAGTTCTGCCACCACCTATTACTGGTACCGGGAA GCACTGGATATCACCAGCTCCATCTCTGACAGTGGAGGCTTAAACTGGAAGATGACGGTCTGCCTTCTGG TTGCCTGGGTCATGGTTTGTCTGGCCATGATCAAAGGCATTCAGTCCTCTGGAAAAATCATGTATTTCAG TTCTCTGTTCCCCTACGTGGTCCTTATATGTTTCCTAATAAGATCTCTCCTTTTAAATGGTTCAATTGAT GGCATCCGACACATGTTCACTCCTAAGCTGGAAATGATGTTGGAGCCCAAGGTTTGGAGAGAGGCAGCAA CTCAGGTGTTCTTTGCATTGGGTTTGGGATTTGGTGGAGTCATCGCGTTTTCAAGTTATAACAAGAGAGA CAACAACTGCCACTTCGATGCTGTCCTAGTGTCTTTCATCAACTTTTTCACTTCAGTTCTGGCAACACTG GTGGTGTTTGCAGTTCTGGGGTTCAAAGCCAATATCGTAAATGAAAAATGCATTTCACAAAACTCCGAGA TGATCTTGAAACTTTTGAAAATGGGAAACATTAGTTGGGATGTCATTCCCCATCACATCAACCTCTCAGC TGTCACTGTGGAAGATTATCGTTTAGTTTACGACATCATTCAAAAAGTGAAGGAGGAGGAGTTTGCTGTT CTTCATCTCAACGCCTGTCAAATTGAGGATGAGCTAAATAAAGCTGTGCAGGGCACTGGCTTGGCTTTCA TTGCCTTTACAGAGGCCATGACACATTTCCCTGCATCTCCTTTCTGGTCAGTGATGTTTTTCCTCATGTT GATAAATCTCGGCCTCGGCAGCATGTTTGGAACAATTGAAGGGATCATCACTCCTATTGTGGATACCTTC AAAGTGAGGAAGGAAATACTCACTGTTATCTGTTGCCTCCTGGCATTTTGTATTGGCTTGATATTCGTGC AGCGCTCTGGAAATTACTTCGTGACAATGTTTGACGATTATTCTGCTACATTGCCTCTGCTAATTGTGGT CATCTTGGAGAATATTGCCGTGAGCTTTGTTTATGGCATAGATAAGTTTATAGAAGACCTCACAGACATG TTAGGATTTGCTCCAAGCAAATATTACTATTATATGTGGAAATACATTTCTCCTCTAATGCTACTAACGT TGCTAATAGCTAGCATTGTGAATATGGGATTAAGTCCTCCCGGATATAATGCATGGATCAAGGAGAAGGC ATCGGAAGAATTTCTGAGCTACCCGATGTGGGGGATGGTCGTCTGTTTCTCTCTGATGGTGCTGGCCATA CTTCCTGTCCCAGTGGTGTTCATCATTCGTCGCTGCAACCTCATAGATGATAGTTCTGGTAACTTGGCCT CCGTGACCTATAAGAGAGGAAGAGTCCTGAAGGAACCTGTGAACTTGGAAGGAGATGACGCAAGCCTCAT TCATGGAAAGATACCGAGTGAAATGTCATCTCCAAATTTTGGTAAAAATATTTATCGAAAACAAAGTGGT TCCCCAACACTGGATACTGCTCCCAATGGACGCTATGGGATTGGGTATTTGATGGCAGACATGCCAGATA TGCCAGAGTCTGACTTGTAG
Translation (729 aa): MPKNSKVVKRDLDDDVIESVKDLLSNEDSVEEVSKKSELIVDVQEEKDTDAEDGSEADDERPAWNSKLQY ILAQVGFSVGLGNVWRFPYLCQKNGGGAYLLPYLILLLVIGIPLFFLELSVGQRIRRGSIGVWNYISPKL GGIGFASCVVCYFVALYYNVIIGWTLFYFSQSFQQPLPWDQCPLVKNASHTYVEPECEQSSATTYYWYRE ALDITSSISDSGGLNWKMTVCLLVAWVMVCLAMIKGIQSSGKIMYFSSLFPYVVLICFLIRSLLLNGSID GIRHMFTPKLEMMLEPKVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSVLATL VVFAVLGFKANIVNEKCISQNSEMILKLLKMGNISWDVIPHHINLSAVTVEDYRLVYDIIQKVKEEEFAV LHLNACQIEDELNKAVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLINLGLGSMFGTIEGIITPIVDTF KVRKEILTVICCLLAFCIGLIFVQRSGNYFVTMFDDYSATLPLLIVVILENIAVSFVYGIDKFIEDLTDM LGFAPSKYYYYMWKYISPLMLLTLLIASIVNMGLSPPGYNAWIKEKASEEFLSYPMWGMVVCFSLMVLAI LPVPVVFIIRRCNLIDDSSGNLASVTYKRGRVLKEPVNLEGDDASLIHGKIPSEMSSPNFGKNIYRKQSG SPTLDTAPNGRYGIGYLMADMPDMPESDL
|