NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14769.4 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14769.4 Public Homo sapiens XY SPRY3 24 110 108 CCDS HistoryNCBI Gene:10251Re-query CCDS DB by CCDS ID:14769.4See the combined annotation on chromosome X in Sequence ViewerSee the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 14769.4

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302805.7 ENSP00000302978.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000302805.7Link to Ensembl Protein Viewer:ENSP00000302978.2Re-query CCDS DB by Nucleotide ID:ENST00000302805Re-query CCDS DB by Protein ID:ENSP00000302978
Original member Current member EBI ENST00000675360.1 ENSP00000502489.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000675360.1Link to Ensembl Protein Viewer:ENSP00000502489.1Re-query CCDS DB by Nucleotide ID:ENST00000675360Re-query CCDS DB by Protein ID:ENSP00000502489
Original member Current member EBI ENST00000695325.1 ENSP00000511806.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000695325.1Link to Ensembl Protein Viewer:ENSP00000511806.1Re-query CCDS DB by Nucleotide ID:ENST00000695325Re-query CCDS DB by Protein ID:ENSP00000511806
Original member Current member NCBI NM_001304990.2 NP_001291919.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001304990.2Link to Protein Sequence:NP_001291919.1Re-query CCDS DB by Nucleotide ID:NM_001304990Re-query CCDS DB by Protein ID:NP_001291919Link to BLAST:NP_001291919.1
Original member Current member NCBI NM_001394353.1 NP_001381282.1 Accepted alive Link to Nucleotide Sequence:NM_001394353.1Link to Protein Sequence:NP_001381282.1Re-query CCDS DB by Nucleotide ID:NM_001394353Re-query CCDS DB by Protein ID:NP_001381282Link to BLAST:NP_001381282.1
Original member Current member NCBI NM_001394354.1 NP_001381283.1 Accepted alive Link to Nucleotide Sequence:NM_001394354.1Link to Protein Sequence:NP_001381283.1Re-query CCDS DB by Nucleotide ID:NM_001394354Re-query CCDS DB by Protein ID:NP_001381283Link to BLAST:NP_001381283.1
Original member Current member NCBI NM_001394355.1 NP_001381284.1 Accepted alive Link to Nucleotide Sequence:NM_001394355.1Link to Protein Sequence:NP_001381284.1Re-query CCDS DB by Nucleotide ID:NM_001394355Re-query CCDS DB by Protein ID:NP_001381284Link to BLAST:NP_001381284.1
Original member Current member NCBI NM_005840.4 NP_005831.1 Accepted alive Link to Nucleotide Sequence:NM_005840.4Link to Protein Sequence:NP_005831.1Re-query CCDS DB by Nucleotide ID:NM_005840Re-query CCDS DB by Protein ID:NP_005831Link to BLAST:NP_005831.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291919.1 288 O43610 288 100% 0 0
NP_001381282.1 288 O43610 288 100% 0 0
NP_001381283.1 288 O43610 288 100% 0 0
NP_001381284.1 288 O43610 288 100% 0 0
NP_005831.1 288 O43610 288 100% 0 0

Chromosomal Locations for CCDS 14769.4

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11) On '+' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
X 155773872 155774738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

Chromosome Start Stop Links
Y 56960392 56961258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGGATGCTGCGGTGACAGATGATTTTCAACAAATTCTGCCTATTGAACAGCTGCGCTCTACTCATGCTA
GCAATGACTACGTGGAACGGCCTCCAGCCCCCTGTAAACAGGCCCTCTCCAGCCCTTCCCTTATTGTGCA
AACCCACAAGTCTGATTGGTCTCTGGCTACCATGCCTACTTCTCTCCCCCGCAGTCTCAGCCAGTGCCAT
CAACTGCAGCCCTTGCCTCAGCATCTGAGCCAATCTAGCATTGCCAGCTCAATGTCCCATAGCACCACTG
CCTCTGATCAAAGGCTCTTGGCCAGCATTACACCCTCACCTTCAGGCCAATCCATCATCCGAACCCAACC
TGGAGCAGGGGTCCACCCAAAGGCTGATGGTGCTCTGAAGGGAGAAGCTGAGCAATCTGCAGGGCACCCT
AGTGAGCACCTCTTCATCTGTGAGGAATGTGGGCGCTGCAAGTGCGTCCCCTGCACAGCAGCTCGCCCTC
TCCCCTCCTGCTGGCTGTGCAACCAGCGCTGCCTTTGCTCTGCTGAGAGCCTCCTCGATTATGGCACTTG
TCTCTGCTGTGTCAAGGGCCTCTTCTACCACTGCTCCACTGATGATGAAGACAACTGTGCTGATGAGCCC
TGCTCTTGTGGGCCTAGTTCTTGCTTTGTCCGCTGGGCAGCCATGAGCCTCATCTCCCTCTTCCTACCCT
GCCTGTGCTGCTACCTGCCTACCCGTGGATGCCTCCATCTGTGCCAACAGGGCTATGATAGCCTCCGGCG
ACCAGGCTGCCGCTGCAAGAGGCACACCAACACTGTGTGCAGAAAGATCTCTTCTGGTAGTGCACCCTTC
CCCAAGGCCCAGGAAAAGTCTGTATGA

Translation (288 aa):
MDAAVTDDFQQILPIEQLRSTHASNDYVERPPAPCKQALSSPSLIVQTHKSDWSLATMPTSLPRSLSQCH
QLQPLPQHLSQSSIASSMSHSTTASDQRLLASITPSPSGQSIIRTQPGAGVHPKADGALKGEAEQSAGHP
SEHLFICEECGRCKCVPCTAARPLPSCWLCNQRCLCSAESLLDYGTCLCCVKGLFYHCSTDDEDNCADEP
CSCGPSSCFVRWAAMSLISLFLPCLCCYLPTRGCLHLCQQGYDSLRRPGCRCKRHTNTVCRKISSGSAPF
PKAQEKSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH