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Report for CCDS50124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50124.1 Public Mus musculus 17 Abcc10 23 108 98 CCDS HistoryNCBI Gene:224814Re-query CCDS DB by CCDS ID:50124.1Re-query CCDS DB by GeneID:224814See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50124.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000167360.7 ENSMUSP00000131843.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000167360.7Link to Ensembl Protein Viewer:ENSMUSP00000131843.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000167360Re-query CCDS DB by Protein ID:ENSMUSP00000131843
Original member Current member NCBI NM_170680.2 NP_733780.1 Accepted alive Link to Nucleotide Sequence:NM_170680.2Link to Protein Sequence:NP_733780.1Re-query CCDS DB by Nucleotide ID:NM_170680Re-query CCDS DB by Protein ID:NP_733780Link to BLAST:NP_733780.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_733780.1 1501 Q8R4P9-1 1501 100% 0 0

Chromosomal Locations for CCDS 50124.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 46303490 46303652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46303913 46304025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46304157 46304254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46304330 46304475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46305401 46305666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46305961 46306121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46306549 46306718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46306957 46307300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46310038 46310233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46310377 46310530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46312290 46312487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46312835 46312912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46313631 46313820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46314216 46314314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46315384 46315555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46316557 46316636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46321553 46321662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46322137 46322293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46323352 46323579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46323693 46324914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 46327772 46327932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4506 nt):
ATGGAGGGGCTCCTGGCCCAGCTGTGTGGCACGGACGCGGCGCGGCCGCTCCCGCTGTGGGAAGGGGACA
CGACGGGCCACTGCTTCACCCAGCTGGTGCTCAGCGCCCTTCCCCACGCGCTCCTCGCCGTCCTCAGTGC
CTGCCACTTGGGCACCCCAAGGACTACCAATCACTCCCCAGCTCTCAATCCTGGCTGGCGCCTCCGACTC
GCAGCATCCTTCCTCCTTTCCATCTTCCCACTGCTAGACCTCCTTCCAGTTGTTTTGCCTCCAGGGTCAC
GCCCAGGGCCCTTATGGCTAGAGGTGCTAGCAGGGTGTGTGACAGCTGTGGCCTGGTTCACCCACAGCCT
GGCCCTGTGGGCACTGGTTCATTCCCCTCATGGCCGTTCCCGTGGACCCTTGGCCTTGGCTCTGGCAGCC
TTTCTACCAACCCCGGCCCTGGTACTAACTCTGCTGTGGCATTGCCAGCGAGGTACATTTCTGCCCCCAC
TTCTCCCAGGACCTCTGGGCCGTGTGTGTCTTCTCATTCTGCAACTGGCAGCAGTCTTGGCCTATGGGTT
GGGCTGGGCAGCCCCTGGGGGACCACAAGAGCCCTGGACTCATGATCCCTTCCTGTCCTCTGAGAGTCAA
GAAACAGAGGTAGCTGAAGATGGAGAGAGTTGGCTGTCACGCTTTTCCTATGCCTGGTTGGCACCCTTGC
TTGCTCGTGGAGTCCGAGGAGAGCTCCAGCAGCCCCGGGACACTTGCCGCCTCCCCCGCAGGCTGCATCC
TGCCTTCCTGGCCCGAGTTTTCCAAGCACATTGGAAGGAGGGGGCCCAACTGTGGAGGGCCCTGTACAGG
GCCTTTGGATGTTGCTACCTGGCCCTTGGACTGTTGAAGATGGTGGGGACCATGCTGGGATTCTCCGGGC
CTCTGCTGCTCTCCCTCCTGGTGGGCTTCCTGGAGGAAGGTCAAGAGCCTCTAAGCCACGGCCTGCTCTA
TGTCCTGGGGTTGGCTGGTGGGACTGTGATAAGTGCTGTGCTGCAGAATCAGTATGGGTATGAGGTCCGT
AAAGTGACACTTCAGGCACGAGTGGCTGTGCTGAGCACCCTCTACCGCAAAGCCCTGAAGCTTGGGCCCA
GCCGCCCTCCCACCGGGGAGGTCCTGAACCTACTAGGCACCGACTCCGAGAGGCTGCTCAACTTTGCTGG
CAGCTTCCATGAGGCCTGGGGCCTGCCTCTGCAGCTGGCCATCACTCTCTACCTGCTGTACCAGCAGGTG
GGCATGGCCTTCCTGGCTGGGCTGGTCTTGGCGCTGCTGCTGGTACCTGTCAACAAAGTGATTGCCACCC
GAATCATGGCCAGCAACCAGGAGATGCTACGGCACAAGGATGCACGGGTTAAGCTCATGACAGAGTTACT
GAGTGGCATTCGAGTCATCAAATTCTTCAGGTGGGAGCAGGCTCTGGGGGACCGAGTGAAGGCTTGCCGG
ACTAAAGAGCTGGGACGACTCCGTGTTATCAAATACTTGGATGCAGCCTGTGTGTACCTCTGGGCTGCCC
TGCCAGTGGTCATCTGCATCACCATCTTCATCACCTATGTCCTCATGGGGCACCAGCTCACTGCCACCAA
GGTGTTTACAGCGCTGGCGCTTGTGCGCATGCTCATTCTTCCTCTCAACAACTTCCCCTGGGTGATCAAT
GGTCTCTTGGAATCCAAAGTATCCCTGGACCGGATCCAGCGTTTCCTCGATCTTCCAAGCTACAGCCCTG
AGGCCTATTACAGTCCTGATCCCCCCGCAGAGCCCTCCACAGCACTGGAGCTGCACGAGGCCCTGTTCTC
CTGGGACCCAATTGGAGCAAGCCAGAAGACCTTCATCAGTCACCTCCAAGTGAAAAAGGGTATGCTGGTG
GGCATCGTGGGAAAGGTGGGCTGTGGGAAGAGTTCGCTGCTGGCCGCCATCACTGGGGAGCTCCACAGGC
TGTGTGGATGGGTGGCAGTGTCAGAACTGTCCAAAGGCTTTGGACTAGCCACCCAGGAACCCTGGATCCA
GTGTGCCACCATCCGAGACAACATCCTCTTTGGGAAGACATTTGATGCTCAACTATACAGGGAGGTTCTG
GAGGCCTGCGCCCTCAATGATGATCTAAGTATCCTGCCTGCTGGAGACCAGACAGAGGTTGGAGAGAAAG
GTGTGACCCTCAGCGGGGGACAGAGGGCCCGGATTGCACTTGCCCGTGCTGTCTACCAGGAGAAAGCACT
CTATCTCCTCGACGACCCTCTGGCTGCTGTGGATGCAGATGTGGCCAACCACCTGTTACACAGGTGCATC
CTGGGAGTGCTGAGCCACACCACCCGGCTGCTGTGCACCCACCGCACTGAGTACCTGGAAAGGGCTGATG
TGGTGCTGTTGATGGAAGCCGGGCAATTGGTCCGAACAGGGCCTCCCTCTGAGATCCTGCCGCTGGTACA
AGCTGTCCCCACAGCCTGGGCTGAGAAGGAACAAGTGGCTACCTCAGGCCAGTCCCCATCTGTATGCGAC
CTGGAGAGAACCACCGAGGAGGAGTTGGAGGTGGAACAGAGCACATGCGGCTGCCTCGTGCAGGAGGAAA
GCAAAAGCGAGGGCGCCGTAGCCCTGCACGTCTACCGAGCATACTGGAGGGCCATGGGCAGCGGCCTGGC
CGCCGCCATCCTCGTCTCTCTGCTCCTCATGCAAGCCACGCGCAACGGTGCTGATTGGTGGCTCGCTCAC
TGGCTGTCTCAGCTGAAGGCCGGCAGAAATGGATCCAGGGAGGATCCAGCTTCCTGCAGCCCAGGCTCCA
CAGCACTCTTCTCCCCACGGCTGCTTCTCTTCTCCCCTGGAAACCTCTACACCCCACTGCTCAGCACCCC
ACTGCACAAGGCTGCTTCCAATGGCACCGCAGACGTCCACTTCTACCTCATCGTGTATGCAACCATTGCA
GGGGTGAACTCCCTCTGCACCCTTCTCCGGGCTGTGCTCTTTGCAGCAGGCGCCCTTCAAGCAGCTGCCA
GCCTACACCACCGCCTACTGCATCGACTCCTCATGGCACCGGTGACTTTCTATGACTCCACACCTTCCGG
CCGGGTCTTGAACCGCTTCTCATCAGACGTAGCCTGTGTAGACGACAGCCTGCCCTTCCTCCTCAACATC
CTGCTGGCCAATTCCGTGGGCCTGCTGGGCCTCCTGGCTGTCCTAGGTTCTGGTCTGCCCTGGCTGCTGC
TCCTGCTACCACCTCTGAGCTTCGTCTACTACAGCGTGCAGGGCTACTACAGGGCTTCCTTCCGGGAGCT
ACGGCGCCTGGGCAGCCTCACCTGGTCTCCGCTCTACTCCCATCTGGCTGACACCCTGGCAGGCCTCCCT
GTGCTCCGGGCTGCAGGGGCCACTTACAGGTTTGAAGAGGAGAACCAGCGACTCTTGGAGCTGAACCAGA
GGTGCCAGTTTGCTTCCTATGCCACGATGCAGTGGTTGGACATTCGACTGCAGCTCATGGGGGCAGCAGT
GGTCAGCGCCATTGCGGGCATTGCCCTGGTGCAGCACCAGCAGGGCCTTGCCAACCCAGGGCTGGTGGGC
CTCGTGCTTTCTTATGCCCTGTCTCTGACGGGCCTGCTCTCGGGTCTGGTGAGCAGTTTCACACAGACGG
AAGCCATGATGGTGAGCGTCGAGCGACTGGAGGAGTATTCCTGTGACGTTCCCCAGGAGCCCCACAGCCA
GCCACTGCAGTCACCCCACCAGCAGCGCATCAGCTGGCTGACCCAGGGAAGTGTGGAATTCCAGGACGTG
GTGCTGGTGTACCGGCCAGGGCTGCCAAATGCCCTAGATGGGGTGACCTTCCGTGTGGAGCCTGGAGAGA
AGCTGGGCATCGTGGGCCGCACAGGCTCCGGCAAGTCTTCCCTGTTTCTGGTGCTCTTCCGGCTGCTGGA
GCCCAACGCAGGGCGAGTGCTCCTGGACAATGTGGACACCAGCCAGCTGGAGCTGGCCGAGCTCAGATCC
CAGCTGGCTGTCATCCCTCAGGAGCCTTTCCTGTTCAGCGGGACTATTCGGGAGAACCTGGACCCCCAGG
GCCTACACGAGGACAGGGCCCTGTGGCAAGCCTTGGAACAGTGTCACCTGAGTGAGGTGGCTGTCGCCAT
GGGTGGCCTGGATGGAGAGCTGGGAGAAAGGGGCCAGAACCTGTCCCTAGGACAGAGACAGCTGCTGTGT
CTGGCAAGGGCTCTTCTTACAGATGCTAAAATCTTGTGCATTGACGAGGCCACAGCAAGTGTGGACCAGA
AGACAGACCAGCTGCTCCAGCAAACCATCTGTAAACGCTTTGCCAACAAGACAGTGCTGACCATCGCCCA
CAGGCTCAACACGATCCTAAACTCTGACCGTGTGCTGGTGCTCCAAGCCGGGAGGGTGGTGGAACTGGAC
TCCCCCTCAGCCCTGCGCAACCAGCCGCACTCCCTGTTCCAGCAGCTCCTGCAGAGCAGCCAGCAGGGAG
CCCACTCCGGACCTTCAGGGTGCTGA

Translation (1501 aa):
MEGLLAQLCGTDAARPLPLWEGDTTGHCFTQLVLSALPHALLAVLSACHLGTPRTTNHSPALNPGWRLRL
AASFLLSIFPLLDLLPVVLPPGSRPGPLWLEVLAGCVTAVAWFTHSLALWALVHSPHGRSRGPLALALAA
FLPTPALVLTLLWHCQRGTFLPPLLPGPLGRVCLLILQLAAVLAYGLGWAAPGGPQEPWTHDPFLSSESQ
ETEVAEDGESWLSRFSYAWLAPLLARGVRGELQQPRDTCRLPRRLHPAFLARVFQAHWKEGAQLWRALYR
AFGCCYLALGLLKMVGTMLGFSGPLLLSLLVGFLEEGQEPLSHGLLYVLGLAGGTVISAVLQNQYGYEVR
KVTLQARVAVLSTLYRKALKLGPSRPPTGEVLNLLGTDSERLLNFAGSFHEAWGLPLQLAITLYLLYQQV
GMAFLAGLVLALLLVPVNKVIATRIMASNQEMLRHKDARVKLMTELLSGIRVIKFFRWEQALGDRVKACR
TKELGRLRVIKYLDAACVYLWAALPVVICITIFITYVLMGHQLTATKVFTALALVRMLILPLNNFPWVIN
GLLESKVSLDRIQRFLDLPSYSPEAYYSPDPPAEPSTALELHEALFSWDPIGASQKTFISHLQVKKGMLV
GIVGKVGCGKSSLLAAITGELHRLCGWVAVSELSKGFGLATQEPWIQCATIRDNILFGKTFDAQLYREVL
EACALNDDLSILPAGDQTEVGEKGVTLSGGQRARIALARAVYQEKALYLLDDPLAAVDADVANHLLHRCI
LGVLSHTTRLLCTHRTEYLERADVVLLMEAGQLVRTGPPSEILPLVQAVPTAWAEKEQVATSGQSPSVCD
LERTTEEELEVEQSTCGCLVQEESKSEGAVALHVYRAYWRAMGSGLAAAILVSLLLMQATRNGADWWLAH
WLSQLKAGRNGSREDPASCSPGSTALFSPRLLLFSPGNLYTPLLSTPLHKAASNGTADVHFYLIVYATIA
GVNSLCTLLRAVLFAAGALQAAASLHHRLLHRLLMAPVTFYDSTPSGRVLNRFSSDVACVDDSLPFLLNI
LLANSVGLLGLLAVLGSGLPWLLLLLPPLSFVYYSVQGYYRASFRELRRLGSLTWSPLYSHLADTLAGLP
VLRAAGATYRFEEENQRLLELNQRCQFASYATMQWLDIRLQLMGAAVVSAIAGIALVQHQQGLANPGLVG
LVLSYALSLTGLLSGLVSSFTQTEAMMVSVERLEEYSCDVPQEPHSQPLQSPHQQRISWLTQGSVEFQDV
VLVYRPGLPNALDGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFRLLEPNAGRVLLDNVDTSQLELAELRS
QLAVIPQEPFLFSGTIRENLDPQGLHEDRALWQALEQCHLSEVAVAMGGLDGELGERGQNLSLGQRQLLC
LARALLTDAKILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELD
SPSALRNQPHSLFQQLLQSSQQGAHSGPSGC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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