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Report for CCDS9717.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9717.1 Public Homo sapiens 14 CNIH1 24 110 108 CCDS HistoryNCBI Gene:10175Re-query CCDS DB by CCDS ID:9717.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9717.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216416.9 ENSP00000216416.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216416.9Link to Ensembl Protein Viewer:ENSP00000216416.4Re-query CCDS DB by Nucleotide ID:ENST00000216416Re-query CCDS DB by Protein ID:ENSP00000216416
Original member Current member NCBI NM_005776.3 NP_005767.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005776.3Link to Protein Sequence:NP_005767.1Re-query CCDS DB by Nucleotide ID:NM_005776Re-query CCDS DB by Protein ID:NP_005767Link to BLAST:NP_005767.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005767.1 144 O95406 144 100% 0 0

Chromosomal Locations for CCDS 9717.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 54427814 54427841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54430261 54430404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54432108 54432220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54436369 54436437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54441247 54441327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (435 nt):
ATGGCGTTCACGTTCGCGGCCTTCTGCTACATGCTGGCGCTGCTGCTCACTGCCGCGCTCATCTTCTTCG
CCATTTGGCACATTATAGCATTTGATGAGCTGAAGACTGATTACAAGAATCCTATAGACCAGTGTAATAC
CCTGAATCCCCTTGTACTCCCAGAGTACCTCATCCACGCTTTCTTCTGTGTCATGTTTCTTTGTGCAGCA
GAGTGGCTTACACTGGGTCTCAATATGCCCCTCTTGGCATATCATATTTGGAGGTATATGAGTAGACCAG
TGATGAGTGGCCCAGGACTCTATGACCCTACAACCATCATGAATGCAGATATTCTAGCATATTGTCAGAA
GGAAGGATGGTGCAAATTAGCTTTTTATCTTCTAGCATTTTTTTACTACCTATATGGCATGATCTATGTT
TTGGTGAGCTCTTAG

Translation (144 aa):
MAFTFAAFCYMLALLLTAALIFFAIWHIIAFDELKTDYKNPIDQCNTLNPLVLPEYLIHAFFCVMFLCAA
EWLTLGLNMPLLAYHIWRYMSRPVMSGPGLYDPTTIMNADILAYCQKEGWCKLAFYLLAFFYYLYGMIYV
LVSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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