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Report for CCDS84434.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84434.1 Public Mus musculus 19 Lipo2 23 108 98 CCDS HistoryNCBI Gene:101055671Re-query CCDS DB by CCDS ID:84434.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 84434.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000147153.3 ENSMUSP00000118907.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000147153.3Link to Ensembl Protein Viewer:ENSMUSP00000118907.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000147153Re-query CCDS DB by Protein ID:ENSMUSP00000118907
Original member Current member NCBI NM_001322338.1 NP_001309267.1 Accepted alive Link to Nucleotide Sequence:NM_001322338.1Link to Protein Sequence:NP_001309267.1Re-query CCDS DB by Nucleotide ID:NM_001322338Re-query CCDS DB by Protein ID:NP_001309267Link to BLAST:NP_001309267.1

Chromosomal Locations for CCDS 84434.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 33720779 33721024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33721678 33721749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33722830 33722901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33730806 33730949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33745725 33745861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33746839 33746948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33748435 33748633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33749419 33749536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 33751254 33751352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1197 nt):
ATGCTCTGGCTGCTGAGAACAATGTGCCTTATCCAAGTACTTGGTAAAATATTTTGTTTATTTGGACCAA
AGAAGAATCCTGAAGCTCACATGAATGTTAGCGAGATTATTAAACACTGGGATTATCCAAGCGAAGAATA
TGAGGTTGTGACTGATGATGGTTACATTCTTCCAATTAACCGAATTCCTCATGGGAAGAACAATGCTAAA
AGTCCAGCCCCCAAAATGGTAGTATTTTGTCAGCATGGCTTGCTTGCAACTCCTGGTGCATGGGTTTCCA
ATCCGCCTGTCAACAGCCTGGCCTTCATCCTAGCAGATGCTGGGTATGATGTGTGGATGGGAAGCAGCAG
AGGAAGTACCTGGGCAAAGAAACACGTGACCCTCAACCCAGATTCTAAAGAATTCTGGGATTTTAGTTTT
GATCAAATGATAAAATATGACCTTCCAGCCACCATTAATTTCATTCTGGATAAAACAGGACAAAAGCAGA
TTTACTACATTGGCCATTCTCAAGGAACCCTTCTTGCTATTGGGGCATTTGCAACAAATCAAAAACTGGC
AGAAAAGATTAAACTCAACATTTTATTGGCTCCAATTTATAGTGTTCAACATTCCAAAGGTATTTCGCAC
CTTGCGTCTTACCTCACTCCAACGACTATCAAGCTCCTCTTTGGTGAAAAAGAATTTTTGCCTACCGTAG
TTTTCAGTGAGGTGGGTGCATGTGTTTGCAATATTAACTTCTTCACTGCTATATGTGCTGCTATCATGGG
ATCGATGGGTGGATATTCTCCAGAGGAGTTAAATAAGAGCCGCCTTGATGTGTATGTAAAGCTCAATCTA
GCAGGAACATCAGTAAAAGTTCTTATACATTATAATCAGGTAGGAAGAAGTGGTATACTTCAGGCTTATG
ATTGGGGAAGTCCATCTCTGAATATGCGACACTACAATCAGACTACTCCTCCTGTATACAATGTAGAAGA
CATGAAGGTTCCAACTGCCATGTTTACTGGTTTAAAAGATTTTTTATCTGACCCAGAAGATGTTGAAATT
TTGAAACCCAAAATCCACAACCTCACATACCTTAAGACTATTCCTGATTTTAGCCATTTTGATTTTATAT
GGGGATTAAATACTAGGGAAGAGGTTTCTGAGGAAATTTTAACAATTCTTAGGAAATATGATGGTGATTA
TATTTAG

Translation (398 aa):
MLWLLRTMCLIQVLGKIFCLFGPKKNPEAHMNVSEIIKHWDYPSEEYEVVTDDGYILPINRIPHGKNNAK
SPAPKMVVFCQHGLLATPGAWVSNPPVNSLAFILADAGYDVWMGSSRGSTWAKKHVTLNPDSKEFWDFSF
DQMIKYDLPATINFILDKTGQKQIYYIGHSQGTLLAIGAFATNQKLAEKIKLNILLAPIYSVQHSKGISH
LASYLTPTTIKLLFGEKEFLPTVVFSEVGACVCNINFFTAICAAIMGSMGGYSPEELNKSRLDVYVKLNL
AGTSVKVLIHYNQVGRSGILQAYDWGSPSLNMRHYNQTTPPVYNVEDMKVPTAMFTGLKDFLSDPEDVEI
LKPKIHNLTYLKTIPDFSHFDFIWGLNTREEVSEEILTILRKYDGDYI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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