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Report for CCDS57533.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57533.1 Public Mus musculus 7 Ccer2 23 108 98 CCDS HistoryNCBI Gene:100504112Re-query CCDS DB by CCDS ID:57533.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57533.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000178767.2 ENSMUSP00000137487.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178767.2Link to Ensembl Protein Viewer:ENSMUSP00000137487.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178767Re-query CCDS DB by Protein ID:ENSMUSP00000137487
Original member Current member NCBI NM_001195091.1 NP_001182020.1 Accepted alive Link to Nucleotide Sequence:NM_001195091.1Link to Protein Sequence:NP_001182020.1Re-query CCDS DB by Nucleotide ID:NM_001195091Re-query CCDS DB by Protein ID:NP_001182020Link to BLAST:NP_001182020.1

Chromosomal Locations for CCDS 57533.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 28756179 28756257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28756464 28756504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28756655 28756742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28757041 28757567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 28758655 28758744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (825 nt):
ATGCTGCTTCGTGTAACCACCTCTGCAGCGCTGCTGCTGCTGCCTCTGCCCCCGCTGCTGGCATTGCTGC
TCGGGGCTGCCTCTTCAGCTCCATTGATGCCCAGACCCTCCAAGGAGGAGCTAACCCGCTGTCTAGCAGA
GGTGGTCATGGAGGTGCTGACACTGGGCCAGGCCCAGCGGGGCCCCTGCACAGCTCTGCTCCACAAAGAG
ATATTTGAGACAGAGCCCCATAGCTGTGTGTCCCCTGAGGAGAAGAAGTTGCTGGGTGAGGACTTCAACC
AGCAGGAGTCTGGAAAGATGAGGTCCAGCCAGGAGATAAGGGATGAGGAAGAGGAGGACGAAGCAGAGAG
GACCCACAAGTCTGGGGTGCAGGAACAGGCAGTCCACACGAAGCTCCACAGCCAGCTTCACCAGGAGGAA
GAAGAGGAGGAAAAGGAAGAAGAGGAGAAGAGCATGCCGGGGAAGACCTCTGAGCATGTGTGGAAGCAAC
ATCCAGAGGGAGGCCTCCAGAAGCGGGTGGCTGAGAAGGCTAGCGATGAGGAGACGGCCCAGTTTCAGGA
GGAGGGAAAGGGCATGCAGCTCCTGGGCGGAGGCCGAAATCTGTGGCAGGGGGCCGGGAGGGTCGGAGGA
GAGAGGCGTGAAGAGTCCTCGAAGCATAGCCACCACCTGGAGCAGCCTGGCACCAAGGCTAAGCAAGAGG
AAGAGGCAGAGGAGGAAGAGGCTTTGGAGCAGGAGGAACACGATGTGGAGCGGCTGGAGCGCATGCAGGA
GCAGTTAAAGAAGGCTACCGCCATGCTAGGGGAGGCTCTCGGGAGGGAAGGCTGA

Translation (274 aa):
MLLRVTTSAALLLLPLPPLLALLLGAASSAPLMPRPSKEELTRCLAEVVMEVLTLGQAQRGPCTALLHKE
IFETEPHSCVSPEEKKLLGEDFNQQESGKMRSSQEIRDEEEEDEAERTHKSGVQEQAVHTKLHSQLHQEE
EEEEKEEEEKSMPGKTSEHVWKQHPEGGLQKRVAEKASDEETAQFQEEGKGMQLLGGGRNLWQGAGRVGG
ERREESSKHSHHLEQPGTKAKQEEEAEEEEALEQEEHDVERLERMQEQLKKATAMLGEALGREG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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