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Report for CCDS92025.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92025.1 Public Homo sapiens 15 DENND4A 24 110 108 CCDS HistoryNCBI Gene:10260Re-query CCDS DB by CCDS ID:92025.1Re-query CCDS DB by GeneID:10260See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92025.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000443035.8 ENSP00000391167.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443035.8Link to Ensembl Protein Viewer:ENSP00000391167.4Re-query CCDS DB by Nucleotide ID:ENST00000443035Re-query CCDS DB by Protein ID:ENSP00000391167
Original member Current member NCBI NM_001320835.1 NP_001307764.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001320835.1Link to Protein Sequence:NP_001307764.1Re-query CCDS DB by Nucleotide ID:NM_001320835Re-query CCDS DB by Protein ID:NP_001307764Link to BLAST:NP_001307764.1

Chromosomal Locations for CCDS 92025.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65661851 65661987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65664330 65664394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65664560 65664722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65665345 65665462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65667449 65667703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65667925 65668123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65669779 65669925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65670013 65670188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65671792 65671886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65676445 65676634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65690415 65691511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65696366 65696497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65697267 65697383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65700544 65700675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65701051 65701192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65701762 65701890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65702305 65702511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65702873 65703008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65706091 65706224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65715478 65715623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65717778 65717996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65722848 65722948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65729072 65729247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65729534 65729678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65731642 65731700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65732752 65732818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65737707 65737945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65738706 65738875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65741715 65741784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65752379 65752628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65756140 65756450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5724 nt):
ATGATTGAAGACAAGGGGCCTCGTGTTGCTGACTACTTTGTTGTAGCAGGATTAACTGATGTTTCAAAGC
CTCTAGAAGAAGAAATTCACTTCAATGATGCTTGTCATAAAGTAGCTAAACCAAAAGAACCTATTACAGA
TGTTTCAGTTATTATCAAATCTCTTGGGGAGGAAGTCCCACAGGATTATATCTGTATTGATGTTACCCCA
ACTGGATTGTCAGCTGATCTTAATAATGGAAGTCTTGTGGGGCCACAGATTTACCTTTGCTATAGAAGAG
GAAGAGATAAGCCTCCACTTACAGATCTGGGGGTTTTATATGACTGGAAAGAAAGATTGAAACAGGGTTG
TGAAATTATTCAGAGTACTCCCTATGGGCGCCCCGCAAATATTAGTGGGAGTACCTCATCACAAAGAATT
TATATCACTTACCGAAGAGCCTCTGAAAACATGACTCAGAATACGTTGGCTGTCACTGACATATGTATTA
TTATACCCAGTAAAGGAGAAAGCCCACCACACACGTTCTGCAAAGTCGACAAGAATCTCAATAACAGTAT
GTGGGGATCAGCAGTATACTTGTGTTATAAAAAATCGGTGGCAAAGACGAACACTGTATCTTACAAAGCT
GGCCTAATTTGTAGATATCCTCAAGAAGATTATGAGTCATTCTCACTACCGGAATCTGTTCCTCTATTTT
GTTTACCAATGGGTGCAACCATTGAATGTTGGCCATCAAATAGCAAATACCCTCTGCCTGTATTTTCTAC
TTTTGTTTTAACTGGAGCCTCAGCTGAAAAGGTTTATGGTGCTGCTATTCAGTTTTATGAACCATACTCT
GAGGAGAATCTCACAGAAAAGCAGAGACTTCTTTTGGGTTTAACATCAGCAGATGGGAAGTCTGATAGTT
CCAAAACAATTCATACTAACAAATGCATCTGTCTTCTTTCTCACTGGCCTTTTTTTGATGCATTCAGGAA
GTTTCTGACTTTTCTGTATCGTTATTCCATCTCTGGGCCTCATGTCCTTCCAATTGAGAAGCATATTTCT
CATTTTATGCATAAAGTTCCTTTTCCATCTCCTCAGAGACCACGGATTTTAGTTCAGTTATCACCACATG
ATAATCTGATTCTCAGTCAGCCTGTGTCTTCACCTCTTCCACTAAGTGGTGGCAAGTTTTCAACACTACT
GCAGAATTTAGGCCCTGAAAATGCTGTGACACTACTGGTGTTTGCAGTAACAGAACATAAAATTCTTATC
CATTCCCTACGGCCATCCGTGCTTACTAGTGTGACAGAAGCATTAGTGTCTATGATTTTCCCTTTCCACT
GGCCATGCCCGTATGTTCCTCTCTGCCCACTGGCTTTAGCAGATGTCTTGAGTGCACCATGTCCATTCAT
AGTAGGGATTGATTCAAGATACTTTGATCTCTATGATCCTCCACCAGATGTCAGTTGTGTTGATGTAGAT
ACCAACACTATTTCTCAAATTGGTGACAAGAAAAATGTAGCCTGGAAGATACTTCCAAAGAAGCCATGTA
AAAATCTGATGAACACACTGAATAATTTGCATCAGCAATTGGCAAAATTGCAGCAGAGACCGAGAGATGA
TGGACTCATGGATTTAGCAATAAATGACTATGATTTTAATTCTGGAAAGAGGTTGCACATGATAGATTTG
GAAATCCAAGAGGCATTTTTGTTTTTCATGGCCTCTATTTTAAAAGGTTACAGATCATACTTAAGGCCAA
TAACACAAGCCCCATCTGAGACAGCCACAGATGCAGCCTCTCTCTTTGCCCTACAAGCTTTCTTAAGAAG
CCGGGACCGGTCACATCAAAAATTCTATAACATGATGACCAAAACACAAATGTTTATTCGCTTCATTGAA
GAATGTTCTTTTGTTAGTGACAAAGATGCAAGCCTGGCATTTTTTGATGATTGTGTAGATAAAGTGGATA
TGGACAAGAGCGGTGAAGTACGACTTATAGAACTGGATGAATCTTTCAAAAGTGAACACACTGTTTTTGT
AACACCACCTGAGATCCCCCACCTACCCAATGGTGAAGAACCCCCTTTACAGTACAGCTATAATGGATTT
CCAGTTCTTAGGAACAATTTATTTGAAAGACCTGAAGGATTTCTACAAGCAAAGAAGAACAAATTGCCTT
CAAAATCAAGTAGTCCTAATAGCCCTTTGCCCATGTTCAGAAGAACAAAACAGGAAATTAAATCAGCCCA
TAAAATTGCAAAGAGGTACTCTTCCATCCCTCAGATGTGGTCTAGGTGTCTACTGCGCCACTGTTATGGA
CTGTGGTTTATTTGTCTCCCAGCTTATGTGAAAGTCTGTCATTCAAAAGTCAGGGCTCTGAAAACAGCAT
ATGATGTGCTTAAAAAAATGCAGTCAAAGAAGATGGATCCACCTGATGAGGTATGCTACCGCATTCTTAT
GCAACTCTGTGGACAATATGATCAGCCAGTGCTTGCAGTTCGAGTGCTTTTTGAAATGCAGAAAGCTGGT
ATTGACCCCAATGCCATTACTTATGGTTATTATAATAAGGCTGTTTTGGAAAGTACCTGGCCTTCAAGAA
GTCGTAGTGGCTATTTTCTTTGGACAAAAGTAAGAAATGTTGTTTTAGGAGTAACACAGTTCAAAAGAGC
TTTAAAGAAGCATGCACACTTATCACAAACAACTCTCTCAGCAGATGGCAGTGACCTGGATGCTGTTAGT
CATGGCAGCATGGATAGTGGTCATGGGACACACACTGTGGAGCAGGCACCTTTTAATACGGGTTTAATCA
AAGTATATGCTACTGATGATAGATCTAGTACAGGTGGCCAGTCTGATCTTGGATATAATTCATTATCTAA
AGATGAAGTTAGAAGAGGGGATACATCTACTGAAGACATTCAAGAAGAAAAAGATAAAAAAGGGAGTGAT
TGTAGTTCCTTGTCAGAGAGTGAGAGTACAAAAGGAAGTGCTGATTGCCTTCCTAAGCTCAGTTATCAAA
ATTCTTCCAGTATCGTTCGCCTCACTGGTACAAGTAACAACAGTGCTGGTAAAATATCAGGAGAAAGCAT
GGAAAGCACACCTGAGCTGCTCTTAATATCATCTCTTGAAGATACAAATGAAACACGAAACATTCAAAGT
AGATGCTTCAGGAAAAGACATAAAAGTGACAATGAAACTAATTTGCAGCAGCAAGTGGTCTGGGGAAATA
GAAACCGTAATCTTAGTGGAGGGGTACTGATGGGATTTATGCTCAATAGAATTAACCAGGAAGCAACCCC
TGGAGATATAGTTGAAAAATTGGGAGCTGATGCAAAAATTCTTTCAAATGTTATCTCAAAAAGCACGAGA
CCAAATACTCTTGATATTGGGAAGCCACCTTTAAGATCAAAAAGAGACAGTCTAGAAAAGGAATCTAGTG
ATGATGATACACCTTTTGATGGTTCTAACTATTTGGCAGATAAAGTGGATTCTCCTGTTATTTTTGACTT
AGAAGACTTAGACAGTGAAACAGATGTATCAAAAGCAGGATGTGTTGCTACACAAAATCCCAAGAGGATT
CAACGTATGAACAGCAGCTTTTCAGTAAAACCTTTTGAAAAAACTGATGTCGCAACAGGATTTGATCCCC
TCTCTCTTTTGGTTGCTGAGACTGAACAGCAGCAAAAAGAAGAAGAGGAGGAGGATGAAGATGATAGCAA
AAGCATTTCAACACCATCTGCTAGGCGTGATTTAGCTGAAGAAATTGTGATGTATATGAATAACATGAGC
AGTCCTTTGACAAGTCGTACACCAAGCATTGATTTACAACGGGCATGTGATGATAAATTAAATAAGAAAA
GTCCACCATTGGTCAAGGCATGCAGAAGATCTAGTCTGCCTCCTAATTCTCCTAAGCCAGTGAGACTTAC
CAAATCTAAAAGTTACACAAAAAGTGAGGAGAAACCAAGGGATAGACTTTGGTCTTCTCCAGCCTTCTCA
CCTACTTGCCCATTTAGGGAAGAATCTCAGGATACATTAACCCACTCATCACCTTCATTTAACTTAGATA
CACTACTAGTACCTAAACTAGATGTTCTAAGAAACAGTATGTTCACTGCTGGAAAAGGAGTTGCAGAGAA
AGCAAGCAAATGGTATTCAAGATTCACCATGTACACCACATCATCTAAGGATCAAAGTTCTGATCGTACC
AGTCTTTCTTCAGTGGGAGCCCAGGATTCTGAATCTACCTCTTTAACAGATGAAGATGTCTGCCATGAGT
TGGAAGGACCTATCTCCTCTCAAGAGACCAGTGCTACTTCAGGGACTAAGAGAATTGATCTCAGCCGAAT
AAGCCTGGAAAGTTCTGCATCCTTGGAAGGATCTCTGTCGAAGTTTGCCTTACCTGGGAAATCAGAAGTG
ACATCTTCCTTCAACGCGAGTAATACAAATATCTTCCAGAACTATGCAATGGAGGTTCTCATCTCAAGTT
GCTCTCGGTGTAGAACTTGTGATTGTCTTGTCCATGATGAGGAAATCATGGCTGGCTGGACAGCAGATGA
TTCAAATCTCAATACTACATGCCCATTCTGTGGCAATATCTTCTTACCCTTTCTGAATATAGAAATAAGA
GATTTAAGACGACCTGGAAGATACTTTCTAAAGTCAAGCCCATCAACAGAAAATATGCACTTTCCATCCT
CCATTTCAAGTCAGACGAGGCAGTCTTGCATTTCAACATCAGCCTCTGGTCTTGACACATCTGCTCTCTC
TGTTCAAGGGAATTTTGATCTAAATAGCAAATCTAAACTGCAGGAAAATTTTTGCACCCGAAGTATTCAG
ATCCCTGCTAATAGATCAAAAACAGCTATGTCTAAATGTCCAATATTTCCAATGGCCAGGAGTATTAGTA
CTTCTGGCCCCTTGGATAAGGAAGATACTGGAAGACAGAAGCTCATTTCTACAGGCAGCCTGCCAGCTAC
TTTACAAGGAGCTACAGATTCTTTAGGTTTAGAATGGCACCTTCCAAGTCCCGATCCTGTCACTGTTCCG
TATCTTAGTCCTTTAGTGGTATGGAAAGAACTTGAAAGCTTATTGGAAAATGAAGGTGATCATGCAATAA
CAGTAGCAGACTTTGTGGACCATCATCCAATTGTTTTTTGGAACCTGGTATGGTATTTCAGACGTCTTGA
CTTGCCCAGTAACTTACCTGGATTGATTCTTTCTTCTGAGCACTGTAACAAGTATTCAAAGATTCCCCGC
CACTGTATGTCTGAAGATAGCAAATATGTTTTAATACAAATGTTATGGGACAATATGAAGTTACATCAGG
ATCCGGGACAGCCCTTGTACATTCTCTGGAATGCACACACCCAAAAATATCCAATGGTCCATTTATTGCA
AAAAAGTGATAACTCATTTAACCAGGAACTGTTGAAAAGTATGGTAAAAAGCATTAAAATGAATGATGTC
TATGGACCAATGAGTCAGATTTTAGAGACACTGAATAAGTGTCCACATTTTAAAAGACAGAGGAGTTTAT
ACAGAGAAATACTATTTCTCTCACTTGTGGCACTGGGAAGAGAAAACATTGATATAGATGCTTTTGATAA
AGAGTACAAGATGGCATACGATCGTCTCACACCTAGTCAAGTCAAGAGTACACACAACTGTGATAGACCA
CCAAGTACAGGGGTGATGGAATGTCGAAAAACCTTTGGAGAACCTTATCTTTAA

Translation (1907 aa):
MIEDKGPRVADYFVVAGLTDVSKPLEEEIHFNDACHKVAKPKEPITDVSVIIKSLGEEVPQDYICIDVTP
TGLSADLNNGSLVGPQIYLCYRRGRDKPPLTDLGVLYDWKERLKQGCEIIQSTPYGRPANISGSTSSQRI
YITYRRASENMTQNTLAVTDICIIIPSKGESPPHTFCKVDKNLNNSMWGSAVYLCYKKSVAKTNTVSYKA
GLICRYPQEDYESFSLPESVPLFCLPMGATIECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYEPYS
EENLTEKQRLLLGLTSADGKSDSSKTIHTNKCICLLSHWPFFDAFRKFLTFLYRYSISGPHVLPIEKHIS
HFMHKVPFPSPQRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILI
HSLRPSVLTSVTEALVSMIFPFHWPCPYVPLCPLALADVLSAPCPFIVGIDSRYFDLYDPPPDVSCVDVD
TNTISQIGDKKNVAWKILPKKPCKNLMNTLNNLHQQLAKLQQRPRDDGLMDLAINDYDFNSGKRLHMIDL
EIQEAFLFFMASILKGYRSYLRPITQAPSETATDAASLFALQAFLRSRDRSHQKFYNMMTKTQMFIRFIE
ECSFVSDKDASLAFFDDCVDKVDMDKSGEVRLIELDESFKSEHTVFVTPPEIPHLPNGEEPPLQYSYNGF
PVLRNNLFERPEGFLQAKKNKLPSKSSSPNSPLPMFRRTKQEIKSAHKIAKRYSSIPQMWSRCLLRHCYG
LWFICLPAYVKVCHSKVRALKTAYDVLKKMQSKKMDPPDEVCYRILMQLCGQYDQPVLAVRVLFEMQKAG
IDPNAITYGYYNKAVLESTWPSRSRSGYFLWTKVRNVVLGVTQFKRALKKHAHLSQTTLSADGSDLDAVS
HGSMDSGHGTHTVEQAPFNTGLIKVYATDDRSSTGGQSDLGYNSLSKDEVRRGDTSTEDIQEEKDKKGSD
CSSLSESESTKGSADCLPKLSYQNSSSIVRLTGTSNNSAGKISGESMESTPELLLISSLEDTNETRNIQS
RCFRKRHKSDNETNLQQQVVWGNRNRNLSGGVLMGFMLNRINQEATPGDIVEKLGADAKILSNVISKSTR
PNTLDIGKPPLRSKRDSLEKESSDDDTPFDGSNYLADKVDSPVIFDLEDLDSETDVSKAGCVATQNPKRI
QRMNSSFSVKPFEKTDVATGFDPLSLLVAETEQQQKEEEEEDEDDSKSISTPSARRDLAEEIVMYMNNMS
SPLTSRTPSIDLQRACDDKLNKKSPPLVKACRRSSLPPNSPKPVRLTKSKSYTKSEEKPRDRLWSSPAFS
PTCPFREESQDTLTHSSPSFNLDTLLVPKLDVLRNSMFTAGKGVAEKASKWYSRFTMYTTSSKDQSSDRT
SLSSVGAQDSESTSLTDEDVCHELEGPISSQETSATSGTKRIDLSRISLESSASLEGSLSKFALPGKSEV
TSSFNASNTNIFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNIFLPFLNIEIR
DLRRPGRYFLKSSPSTENMHFPSSISSQTRQSCISTSASGLDTSALSVQGNFDLNSKSKLQENFCTRSIQ
IPANRSKTAMSKCPIFPMARSISTSGPLDKEDTGRQKLISTGSLPATLQGATDSLGLEWHLPSPDPVTVP
YLSPLVVWKELESLLENEGDHAITVADFVDHHPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKYSKIPR
HCMSEDSKYVLIQMLWDNMKLHQDPGQPLYILWNAHTQKYPMVHLLQKSDNSFNQELLKSMVKSIKMNDV
YGPMSQILETLNKCPHFKRQRSLYREILFLSLVALGRENIDIDAFDKEYKMAYDRLTPSQVKSTHNCDRP
PSTGVMECRKTFGEPYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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