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Report for CCDS17983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17983.1 Public Mus musculus 4 Tmem64 23 108 98 CCDS HistoryNCBI Gene:100201Re-query CCDS DB by CCDS ID:17983.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17983.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062684.8 ENSMUSP00000055892.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062684.8Link to Ensembl Protein Viewer:ENSMUSP00000055892.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000062684Re-query CCDS DB by Protein ID:ENSMUSP00000055892
Original member Current member NCBI NM_181401.3 NP_852066.2 Accepted alive Link to Nucleotide Sequence:NM_181401.3Link to Protein Sequence:NP_852066.2Re-query CCDS DB by Nucleotide ID:NM_181401Re-query CCDS DB by Protein ID:NP_852066Link to BLAST:NP_852066.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_852066.2 381 Q3U145 381 100% 0 0

Chromosomal Locations for CCDS 17983.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 15265952 15266749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15281007 15281162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 15283159 15283350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGCGGAACCCCGGTGGGAGCCTGCCCCACACGCTGCCCCGGGCCTTGCAGCACGCCGGTCGGACGGGAG
TCGTGGAGCAGCCGGGCCGCTGGGCACCGGAGCGGACAGCGGGAGGGGACCGCTCGGAGGACCGCCTTCC
CCGCGGGGGCGGGGCCAGCGCGGCGGCGGCTGCTGCTGCGGCGGCGGCCTCGGGCGCCCTGCTCGGCGCC
TATCTGGAGCGCCACGGTCTGCCCGCGGCCTCGGACTTGCCGGCGCCGGCCGGGGCGTTGGCAGGCGGCC
CCGGGAGCGGCGGCGGCGTGGTGGTCGGGGTGGCCGAGGTGAGAAACTGGCGCTGCTGCTGCCTCGGCAG
CACCTGTTGGTGCCGGAGCCTCGTGCTGGTGTGCGTGCTGGCCGCCCTGTGCTTCGCTTCCCTGGCCCTG
GTCCGCCGCTACCTGCAGCACCTCCTGCTCTGGGTGGAGAGCCTCGACTCGCTGCTCGGTGTCCTGCTCT
TCGTCGTGGGCTTCATCGTGGTCTCCTTCCCCTGCGGTTGGGGCTACATCGTGCTTAATGTGGCGGCCGG
CTACCTGTACGGCTTCGTGCTAGGCATGGGGCTCATGGTGGTGGGCGTCCTCATTGGCACCTTTATCGCT
CATGTGGTCTGCAAGCGGCTACTCACCGCCTGGGTGGCTGCCAGGATCCAGAACAGCGACAAGCTGAGCG
CCGTTATCCGCGTCGTGGAGGGAGGAAGCGGCCTGAAGGTGGTGGCGCTGGCCCGGCTGACTCCCATACC
TTTTGGGCTTCAGAATGCAGTGTTTTCGATTACTGACGTCCCCTTGCCCAGCTACCTGATGGCGTCTTCA
GCTGGGCTGCTCCCGACTCAGCTTCTGAATTCTTACTTGGGAACCACACTACGGACTATGGAAGATGTCA
TCGCAGAACAAAGTCTTAGTGGCTATTTTGTCTTTTGTTTACAGATTGTTATAAGCATTGGCCTCATGTT
TTATGTAGTCCATCGCGCTCAAGTGGAATTGAATGCAGCTATTGTAGCTTGTGAGATGGAACTGAAAACC
TCTCTGGTTAAAGGCAATCAATCGGATCCCAGTGGCTCTTCCTTCTACAACAAGAGGACCCTCACGTTTT
CTGGAGGTGGAATCAATATTGTATGA

Translation (381 aa):
MRNPGGSLPHTLPRALQHAGRTGVVEQPGRWAPERTAGGDRSEDRLPRGGGASAAAAAAAAAASGALLGA
YLERHGLPAASDLPAPAGALAGGPGSGGGVVVGVAEVRNWRCCCLGSTCWCRSLVLVCVLAALCFASLAL
VRRYLQHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMVVGVLIGTFIA
HVVCKRLLTAWVAARIQNSDKLSAVIRVVEGGSGLKVVALARLTPIPFGLQNAVFSITDVPLPSYLMASS
AGLLPTQLLNSYLGTTLRTMEDVIAEQSLSGYFVFCLQIVISIGLMFYVVHRAQVELNAAIVACEMELKT
SLVKGNQSDPSGSSFYNKRTLTFSGGGINIV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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