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Report for CCDS59371.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59371.1 Public Homo sapiens 19 ZNF730 24 110 108 CCDS HistoryNCBI Gene:100129543Re-query CCDS DB by CCDS ID:59371.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59371.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000597761.7 ENSP00000472959.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000597761.7Link to Ensembl Protein Viewer:ENSP00000472959.1Re-query CCDS DB by Nucleotide ID:ENST00000597761Re-query CCDS DB by Protein ID:ENSP00000472959
Original member Current member NCBI NM_001277403.2 NP_001264332.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001277403.2Link to Protein Sequence:NP_001264332.1Re-query CCDS DB by Nucleotide ID:NM_001277403Re-query CCDS DB by Protein ID:NP_001264332Link to BLAST:NP_001264332.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001264332.1 503 Q6ZMV8 503 100% 0 0

Chromosomal Locations for CCDS 59371.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 23117174 23117176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 23134080 23134206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 23135948 23136043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 23145271 23146556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGGGAGCGTTGACATTTAGAGATGTGGCCATAGAATTCTCTCTGGAGGAGTGGCAATGTCTGGACACCG
AACAACAGAATTTATATAGAAATGTAATGTTAGATAACTACAGAAACCTGGTCTTCCTGGGTATTGCTGT
CTCAAAGCCAGACCTGATCACCTGTCTGGAGCAAGAAAAAGAGCCTTGGAATTTGAAGACACATGATATG
GTAGCCAAACCCCCAGTTATATGTTCTCATATTGCCCAAGACCTTTGGCCAGAGCAAGGCATAAAAGATT
ATTTCCAAGAAGTCATACTGAGACAATATAAAAAATGTAGACATGAGAATTTACTGTTAAGAAAAGGCTG
TAAAAATGTGGATGAGTTTAAGATGCACAAAAAAGGTTATAATAGACATAACCAGTGTTTGACAACTTCC
CATAGCAAAATATTTCAGTGTGACAAATATGTGAAAGTCTTTCATAAATTTTCAAATTCAAACAGACATA
AGATAAGACATACTTCGAAGAAACCTTTCAAATGTAAAGAATGTGGAAAATTATTTTGCATTCTTTCACA
CTTAGCTCAACATAAAAAAATTCATACTGGAGAGAAATCCTACAAATGTGAAGAATATGGCAAAGCCTTT
AATGAGTCCTCAAACTGTACTACACATAAAAGAATTACTGAGAAAAAACCTTACAAATGTAAAGAATGTG
GCAAAGCCTTTAACTGGTTTTCACATTTTACTACACATAAGAGAATTCATACTGGAGAAAAACCCTACCA
ATGTGAGAAATGTGGCAAATTTTTTAACCAATCCACAAACCTTACTACACATAAAAGAATTCATACTGGA
GAGAAACCCTATAAATGTGAAGAATGTGGCAAAGCCTTTAACCAGTCCTCAAACCTTACTGAACATAAGA
AAATTCATACTAAAGAGCAACCATACAAATGCGAAAAATGTGGCAAAGCTTTTAAGTGGTCCTCAACCCT
TACAAAACATAAAAGAATTCATAATGGAGAAAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAC
CGATCCTCAACCCTTAATAGACATAAGATAACTCATACTGGAGGGAAACCCTACAAATATAAAGAATGTG
GTAAAGCTTTTAACCAATCCTCAACTCTTACTATACATAAGATAATTCATACTGTAGAGAAATTTTACAA
ATGTGAAGAATGTGGCAAAGCCTTTAGCCGTATCTCACACCTTACTACACATAAGAGAATTCATACTGGA
GAGAAACCCTACAAATGTGAAGAATGTGGCAGAGCTTTCAACCAGTCCTCAACCCTTACTACACATAAAA
GAATTCATACTGGAGAGAAACCCTATGAATGTGAAGAATGTGGCAAAGCTTTTAACCGGTCCTCAACCCT
CACTACACATAAGATAATTCATTCTGGGGAAAAAATCTACAAATGTAAAGAATGTGGTAAAGCCTTTAGG
CGGTTCTCACACCTTACTAGGCATAAGACAATTCATACATAA

Translation (503 aa):
MGALTFRDVAIEFSLEEWQCLDTEQQNLYRNVMLDNYRNLVFLGIAVSKPDLITCLEQEKEPWNLKTHDM
VAKPPVICSHIAQDLWPEQGIKDYFQEVILRQYKKCRHENLLLRKGCKNVDEFKMHKKGYNRHNQCLTTS
HSKIFQCDKYVKVFHKFSNSNRHKIRHTSKKPFKCKECGKLFCILSHLAQHKKIHTGEKSYKCEEYGKAF
NESSNCTTHKRITEKKPYKCKECGKAFNWFSHFTTHKRIHTGEKPYQCEKCGKFFNQSTNLTTHKRIHTG
EKPYKCEECGKAFNQSSNLTEHKKIHTKEQPYKCEKCGKAFKWSSTLTKHKRIHNGEKPYKCEECGKAFN
RSSTLNRHKITHTGGKPYKYKECGKAFNQSSTLTIHKIIHTVEKFYKCEECGKAFSRISHLTTHKRIHTG
EKPYKCEECGRAFNQSSTLTTHKRIHTGEKPYECEECGKAFNRSSTLTTHKIIHSGEKIYKCKECGKAFR
RFSHLTRHKTIHT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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