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Report for CCDS57519.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57519.1 Public Mus musculus 7 Gm4567 23 108 98 CCDS HistoryNCBI Gene:100043645Re-query CCDS DB by CCDS ID:57519.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57519.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000178591.1 ENSMUSP00000136041.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178591.1Link to Ensembl Protein Viewer:ENSMUSP00000136041.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178591Re-query CCDS DB by Protein ID:ENSMUSP00000136041
Original member Current member EBI ENSMUST00000190554.1 ENSMUSP00000140310.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000190554.1Link to Ensembl Protein Viewer:ENSMUSP00000140310.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000190554Re-query CCDS DB by Protein ID:ENSMUSP00000140310
Original member Current member NCBI NM_001037248.3 NP_001032325.1 Accepted alive Link to Nucleotide Sequence:NM_001037248.3Link to Protein Sequence:NP_001032325.1Re-query CCDS DB by Nucleotide ID:NM_001037248Re-query CCDS DB by Protein ID:NP_001032325Link to BLAST:NP_001032325.1

Chromosomal Locations for CCDS 57519.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 22714005 22714910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (906 nt):
ATGACGGAGCAGGATCTGAAGATGATGGAGCAGGATCTGAAGGCCTGCTACTCAATTGAAGAGAACTTCG
ACACTAACTATAAGATGCTGAACACACTGGGTGAAGGAAAATTTTCAGTGGTGAAACGAGCCTTCCATGT
CCCCACAAGTACCTCTGTGGCTGTAAAAATTCTCCAAAACACCAAGGAGTACACCTCACCCATCTGCAGG
GAAGCCAGGATTATGAAATCACTTAGCCATCCTAACATTATCAAGCTGTTTCATGTGGTCCAGAGAAGAG
AGACTACCTACCTGGTGATGGAGTATGCCTCAGAGGGAGAGCTACAAGATCGCATCATCAAAGTGGGGTC
TTTAGAGGAGAGCGAGACTCGAAGGCTGTTTGCCCAGATAGTACATGCGGTGCAGTACTGCCATGACCAT
CACATTGTCCATAGAGACATAAAGGCCAGCAACATCTTGATCGACTACAGGGGAAATGCCAAGCTGTGTG
ATTTTGGCTTGGCTGCTGAAGTGATTCCTGGACAAAAGCTGGCAGGTTTCTGTGGCACGCTGCCCTACTG
TGCCCCGGAACTCTTGCAAGCAGAGAAATATGAGGGCCCCCCTGTAGATATCTGGAGTTTAGGGGTCCTC
CTGTTCCTCATGGTATCTGGGAACTTGCCTTTCCAAGGCAGGTATTTTGTGGACTTAAAGCAGGAGATCA
TCTCTGCAAACTTCAGCATCCCTTCCCATGTTTCCATTGATATTCTCAATGTCATCATTGAACTGCTGAT
GATCAATCCCAGCAGGAGGCCCACCATCCACCAAATCATGAGGCACCCCATGATCAGGGGCAGTGAGGCA
TGTTTACCACCTACTTCCACACAGATTTCCCAGGCACCCCAAGCCACAGCATTGTCAGGACCATGA

Translation (301 aa):
MTEQDLKMMEQDLKACYSIEENFDTNYKMLNTLGEGKFSVVKRAFHVPTSTSVAVKILQNTKEYTSPICR
EARIMKSLSHPNIIKLFHVVQRRETTYLVMEYASEGELQDRIIKVGSLEESETRRLFAQIVHAVQYCHDH
HIVHRDIKASNILIDYRGNAKLCDFGLAAEVIPGQKLAGFCGTLPYCAPELLQAEKYEGPPVDIWSLGVL
LFLMVSGNLPFQGRYFVDLKQEIISANFSIPSHVSIDILNVIIELLMINPSRRPTIHQIMRHPMIRGSEA
CLPPTSTQISQAPQATALSGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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