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Report for CCDS51361.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51361.1 Public Mus musculus 4 Oog3 23 108 98 CCDS HistoryNCBI Gene:100012Re-query CCDS DB by CCDS ID:51361.1Re-query CCDS DB by GeneID:100012See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51361.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050933.8 ENSMUSP00000059834.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050933.8Link to Ensembl Protein Viewer:ENSMUSP00000059834.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000050933Re-query CCDS DB by Protein ID:ENSMUSP00000059834
Original member Current member NCBI NM_201258.2 NP_957710.2 Accepted alive Link to Nucleotide Sequence:NM_201258.2Link to Protein Sequence:NP_957710.2Re-query CCDS DB by Nucleotide ID:NM_201258Re-query CCDS DB by Protein ID:NP_957710Link to BLAST:NP_957710.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_957710.2 500 Q3UWY1-1 500 100% 0 0

Chromosomal Locations for CCDS 51361.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 144157862 144158438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144159101 144159682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144160205 144160518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144162577 144162606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1503 nt):
ATGATGATCTGTCACCAGTGTCTAGATCAAGATGACTCTTCAGAAGAAGAAGAAGCAGTTAGTGTCTACT
CCCCATCCACCCTGGTGAAACTGGCAAGACAGAGGCTACTGAGGGAGGAGGCTTTGGTCATTTCTGCTCT
CAAGGGCCTGCCAAATATGCTGTTCCCAGTGATATTTGAGGAGGCCTTCATTAATGGTCATACAAAGATC
TTGAAGGCCATGATACCTATGTGGCCCTTCCCATACCTTTCTGTAGGAGCACTGACAAACAACTGCAACC
TGAAGACTTTGAAGGCTGTTCTTGATGGACTAGATATACTTCTTGCACAAAAGGTTCGCTCCAGTAGGTG
CAAACTCAGAGTACTCAAATGGAGAGATGAACAGCATGACTTTTGTGGGATATGGCCTGGATCCCATGAA
GCTGAAGACTTACCAGAGTTAATGACACAGAAGCATCCCGTGCAGAACAACCCTGACTGTGGGGTAAAGA
AAGAATTGAGGGTAACAACTGAACTCTCTGTCATGAAGGGCAGACTTGATGATTCTGCCACATACTTGTT
GGAGTGGGCCCAGCAGAGAAAAGATTCCATTCACCTACTCTGCAGAAAGCTGGTAATTGAAACCTTAACC
AAAGACACAGTGATAGAAATCTTCAAAATTGTAAATGCAGATTGTATACAGGAGCTGGAGCTGTATTCTC
TTTGCCTAGAAGATTTGGCTTTTCTTAATCCCTACCTGAGACAGATGGACAATCTTCTTGAACTCACACT
TGATCACGTCACAGATTCCCTCAGTATGGGTGATTCTGAAATGTGTGAGGAAGAAATGATCACATTGGTT
TCTCAACTTCCCACATTTCCCTGTCTCCAGAAACTCTGTGTAAATGATGTCTACTTTATATATGGCAACC
TGAATGAAATCCTCAGGTGCCTGAAGAAGCCATTGGTATCATTTTGCATCAGTAACTGTGAACTCTCACA
GTCAGACTTGGATTGCCTGCCCTATTGCCTGAATATTTTTGAGCTAAAATGTTTGTACCTTATTGATATA
CCTTTAAATCATTTATGCCTTGATCCTCTCGGGTTTCTCCTTGAGAGTGTTAGACATACCCTGGAATGCT
TGGAATTAAAGTCATGTGATATGGGGGAACCTCAATTCAATGCCCTGCTGCCTGCCCTAAGTCAATGTTC
CCACCTCACAGATGTCAGTTTTTGGGAAAATGAACTCTCTCTGCTGTTCCTGAAACAACTTCTACAGCAC
ACATCCAAGCTGACTCAGCTGAGCTATGAGCTGTACCCTGCCCCTCTTGAGTGCTATGATGACAGGGGTT
TAATACTATCACACAGATTAGAACAATTTTGTCCCGAACTCCTGGATATACTCAGGGCCAAAAGACAGCC
CAAGGATATTGCCTTTGTTACAAACCCATGTTCTAAATGTGGTAGATACTATGTTTATGATCCAAAGACC
CAACGTTTCTCTTTGGAAGACACAACCCTGTAA

Translation (500 aa):
MMICHQCLDQDDSSEEEEAVSVYSPSTLVKLARQRLLREEALVISALKGLPNMLFPVIFEEAFINGHTKI
LKAMIPMWPFPYLSVGALTNNCNLKTLKAVLDGLDILLAQKVRSSRCKLRVLKWRDEQHDFCGIWPGSHE
AEDLPELMTQKHPVQNNPDCGVKKELRVTTELSVMKGRLDDSATYLLEWAQQRKDSIHLLCRKLVIETLT
KDTVIEIFKIVNADCIQELELYSLCLEDLAFLNPYLRQMDNLLELTLDHVTDSLSMGDSEMCEEEMITLV
SQLPTFPCLQKLCVNDVYFIYGNLNEILRCLKKPLVSFCISNCELSQSDLDCLPYCLNIFELKCLYLIDI
PLNHLCLDPLGFLLESVRHTLECLELKSCDMGEPQFNALLPALSQCSHLTDVSFWENELSLLFLKQLLQH
TSKLTQLSYELYPAPLECYDDRGLILSHRLEQFCPELLDILRAKRQPKDIAFVTNPCSKCGRYYVYDPKT
QRFSLEDTTL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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