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Report for CCDS26617.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26617.1 Public Mus musculus 13 Zfp729a 23 108 98 CCDS HistoryNCBI Gene:212281Re-query CCDS DB by CCDS ID:26617.1Re-query CCDS DB by GeneID:212281See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26617.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000012314.9 ENSMUSP00000012314.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000012314.9Link to Ensembl Protein Viewer:ENSMUSP00000012314.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000012314Re-query CCDS DB by Protein ID:ENSMUSP00000012314
Original member NCBI NM_183146.4 NP_898969.2 Updated not alive Link to Nucleotide Sequence:NM_183146.4Link to Protein Sequence:NP_898969.2Re-query CCDS DB by Nucleotide ID:NM_183146Re-query CCDS DB by Protein ID:NP_898969
Current member NCBI NM_183146.5 NP_898969.2 Accepted alive Link to Nucleotide Sequence:NM_183146.5Link to Protein Sequence:NP_898969.2Re-query CCDS DB by Nucleotide ID:NM_183146Re-query CCDS DB by Protein ID:NP_898969Link to BLAST:NP_898969.2

Chromosomal Locations for CCDS 26617.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67619187 67621849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67623468 67623563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67624035 67624161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67637647 67637682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2922 nt):
ATGGAGTTCGGTGCAGGGACCAGCGCCTTCTTTCAGGAAATGCTGTCATTCAGGGATGTGGCCATTGATT
TCTCTGCAGAGGAGTGGGAATGCCTGGAGCCTGCTCAGTGGAATCTGTACAGGGACGTGATGCTCGAGAA
CTACAGCAACCTTGTGTTCCTGGGTCTTGCTTCGTGTAAGCCACATCTGATCACATGTCTGGAGCAAATA
CAAGAGCCTTCAGATGTGAAAAGAGGAGCAGCTACCTCTATGCTCCGGGGAGAAAAATGTTATACGTGCA
AAGAGTGTGGCAAAGTTTTTGAGTGGACCAAAGTGTTCCAAAATCATGAGATGCTTTATATAGGAATGAA
TCCCAACAAGTGTGAAGAATGTGCCAGGTCCTTCCATAGTCCATCATTAAGTTCTGAAGAGAACAGAATT
CATACAGGAGAAAAACCTTACAAATGTGAAGTTTGTGGCAAGGCCTTCTGCATTCCATTATTACTTTCTA
AACACAAGAGAGTTCATACAGGAGAGAATCTCTACAAGTGTGAAGTGTGTGGCAAGGCCTTCCAACATCC
ATCAAGACTTTCCAGACATAAGAAGATTCATTCAGAAGAGAAACCATACAAGTGTGAAGTATGTGGAAAG
GCCTTCCACTTTCCATCATTACTTTTGGTACACAAGAGAGTTCATACAGGAGAGAAACCATACAAATGTG
AAATATGTGACAAAGCCTTCCATTATCCATCAATACTCTCTAAACACAAGCGAATTCATACAGGAGAGAA
ACCATACAAATGTGAAGAATGTGGCAAGGCCTTCCACATTTCATCATTTCTTTCTAAACACAAAATAATT
CATAGAGGAGAAAAACCCTACAAGTGTGAGGTATGTGGCAAGGCCTTCCATTATCCATCAAGACTTTCCA
ACCATAAGAAAATCCATTCAGGAGAGAAACCATTCAAGTGTGAAGTATGTGGGAAGGCCTTCCGCATTTT
ATCACTCCTTTCTAAGCACAAGATAATTCATACAGAAGAGAATCCTTACAAGTGTGAAGTATGTGGCAAG
GCTTTCGATTATCCCTCAAGACTTTCTACCCATGCAAAAATGCATACAGGAGAGAAACCATACAAGTGTG
AAGTATGTCAAAAGGCTTTTCGTTCTCTGTCATCACTTTCTAAACACAAGAGAATTCATACAGAAGATAA
TTATTATAACAATGAATTATGTGGCAAGGCCTTCATTTATCCTTCAAGACTCTCTAAACATAAGAGAATT
TGTGCAGGAGAGAAGCCCTACAAGTGTGAAGTATGTGGCAAGGCCTTCCATGTTTCATCACTGCTTTCTA
AACACAGGACAATTCATACAGGAGAAAAACTCTATAAGTGTGAAGTATGTGGGAAGGCCTTTTATTATCC
ATCAAGACTTTCCAACCATAAGAAAATTCATACAGGAGAGAAACCATTCCAGTGTGAAGTATGTGGGAAG
GCCTTCTGTTTTCCTTCATCACTATCTAAACACAAGAGAATTCACACAGGAGAGAAACCATACAAATGTA
AAGAGTGTGGAAAGGCCTTCCGCTCTCTGTCCTCACTTTCTAAACACAAGAGAATTCACACAGGAGAGAA
ACCCTACAAGTGTGAAGAATGTGGCAAGGCCTTCCATTATCCATCATTACTTTCTAAACACAAGATAATT
CATACAGAAGAAAAACCTTACAAGTGTGACGTATGTGGCCAGGCATTCCATGTTCCATCAAAACTTTCTC
ATCACAAGATAATTCATACAGGAGAAAAACCCTACAAGTGTGAAGTGTGTGGCAAGGCCTTCTGCATTCC
ATTATTACTTTCTAAACACAAGAGAGTTCATACAGGAGAGAATCCCTATAACAGTCAAGTATGTAGCAAG
GCCTTCGTTTATCCTTCAAAACTTTCTAAGCATAAGAAAGTTCGTACAAAAGAGAAACCATACAAGTGTG
AAGTATGTGGAAAGGCCTTCCGCTTTCCATCATTACTACTAATACACAAGGGAATGCATACTGGAGAAAA
ACCCTACAAGTGTGAAGATTGTGGCAAGGCCTTCCATTATCCATCACTACTTTCTAAACACAAGCGAATT
CATACAGGAGAAAAGCCATACCAGTGTGAAGTGTGTGGCAAGGACTTCCATGTTTCATCATCACTATCTA
AACACAGGATAATTCATACAGGAGAGAAGCCATACAAGTGTGAAATATGTGGGAAGACCTTCCGCTTTTC
ATCATCACTATCTAAACACAAGAGAAATCATACAGGAAAGAAACCCTACAAGTGTGAAGAATGTGGCAAG
GCCTTCCATTTTCCATCAATACTTGCAAAACACAAGATAAGTCACACTGGAGAGAAACCCTACAATTGTG
ACTTATGTGGCAAGGCCTTCCATTATGCATCATTACTTTCTAAACATAAGATGATTCATACAGGAGAAAA
ACCCCACAAGTGTGATATATGTGGCAAGGCCTTCCATTATCCTTCAAAACTTTCCAACCATAAGAAAATT
CATACAGGAGAGAAACCCTACAAGTGTGAAGTATGTGGGAATGTCTTCTGTTTTGCATCTTCACTTTCTA
AACACAAGAGAATTCACACAGGAGAGAATCCGTACAAGTGTGAAGTGTGTGGCAAAGCCTTCTATTATCC
ATCATTACTTTCTAAACACAAGATCATTCATACAGGAGAGAAACCCTACAAGTGTGACTTATGTGGCAAG
GCCTTCCATTATCCATCATTACTTTCTAAACACAAGGTAATTCATACAGGAAAAAAACCCTACAAGTGTG
AAGTGTGTGGCAAAGCCTTCCATTATCCCTCACGACTTTCCAAGCATAAGAAAATTCATGGGGCTGGAGA
CATGGCTCAGCAGTTAAGAGATCTGGCTGCAATTTCAATTGTGCTGTCCTGA

Translation (973 aa):
MEFGAGTSAFFQEMLSFRDVAIDFSAEEWECLEPAQWNLYRDVMLENYSNLVFLGLASCKPHLITCLEQI
QEPSDVKRGAATSMLRGEKCYTCKECGKVFEWTKVFQNHEMLYIGMNPNKCEECARSFHSPSLSSEENRI
HTGEKPYKCEVCGKAFCIPLLLSKHKRVHTGENLYKCEVCGKAFQHPSRLSRHKKIHSEEKPYKCEVCGK
AFHFPSLLLVHKRVHTGEKPYKCEICDKAFHYPSILSKHKRIHTGEKPYKCEECGKAFHISSFLSKHKII
HRGEKPYKCEVCGKAFHYPSRLSNHKKIHSGEKPFKCEVCGKAFRILSLLSKHKIIHTEENPYKCEVCGK
AFDYPSRLSTHAKMHTGEKPYKCEVCQKAFRSLSSLSKHKRIHTEDNYYNNELCGKAFIYPSRLSKHKRI
CAGEKPYKCEVCGKAFHVSSLLSKHRTIHTGEKLYKCEVCGKAFYYPSRLSNHKKIHTGEKPFQCEVCGK
AFCFPSSLSKHKRIHTGEKPYKCKECGKAFRSLSSLSKHKRIHTGEKPYKCEECGKAFHYPSLLSKHKII
HTEEKPYKCDVCGQAFHVPSKLSHHKIIHTGEKPYKCEVCGKAFCIPLLLSKHKRVHTGENPYNSQVCSK
AFVYPSKLSKHKKVRTKEKPYKCEVCGKAFRFPSLLLIHKGMHTGEKPYKCEDCGKAFHYPSLLSKHKRI
HTGEKPYQCEVCGKDFHVSSSLSKHRIIHTGEKPYKCEICGKTFRFSSSLSKHKRNHTGKKPYKCEECGK
AFHFPSILAKHKISHTGEKPYNCDLCGKAFHYASLLSKHKMIHTGEKPHKCDICGKAFHYPSKLSNHKKI
HTGEKPYKCEVCGNVFCFASSLSKHKRIHTGENPYKCEVCGKAFYYPSLLSKHKIIHTGEKPYKCDLCGK
AFHYPSLLSKHKVIHTGKKPYKCEVCGKAFHYPSRLSKHKKIHGAGDMAQQLRDLAAISIVLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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