NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS36767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36767.1 Public Mus musculus 13 Mrps36 23 108 98 CCDS HistoryNCBI Gene:66128Re-query CCDS DB by CCDS ID:36767.1Re-query CCDS DB by GeneID:66128See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36767.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109333.7 ENSMUSP00000104957.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109333.7Link to Ensembl Protein Viewer:ENSMUSP00000104957.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109333Re-query CCDS DB by Protein ID:ENSMUSP00000104957
Original member Current member NCBI NM_025369.3 NP_079645.1 Accepted alive Link to Nucleotide Sequence:NM_025369.3Link to Protein Sequence:NP_079645.1Re-query CCDS DB by Nucleotide ID:NM_025369Re-query CCDS DB by Protein ID:NP_079645Link to BLAST:NP_079645.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079645.1 102 Q9CQX8 102 100% 0 0

Chromosomal Locations for CCDS 36767.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 100736256 100736273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100739014 100739201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100741168 100741231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 100744530 100744568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (309 nt):
ATGGGCAGCAAGATGGCTTCCGCCACCAGGGTCGTGCAGGTAGTGAAGCCACACGCTCCATTAATAAAGT
TCCCTAACAGAAGAGACAAACCTAAACTCAGTGCCTCAGAAGCTTTGGGGTCTGCAGCGCTCCCCTCCCA
CTCCTCTGCAATTTCACAGCATTCTAAAGGAAGTACGTCCCCCGATTTACTGATGCACCAGGGGCCACCA
GACACTGCAGAAATTATAAAATCATTACCTCAGAAATACAGAAGGAAACCTATGTCTCAAGAGGAAATGG
AATTTATCCAGCGTGGGGGTCCAGAGTGA

Translation (102 aa):
MGSKMASATRVVQVVKPHAPLIKFPNRRDKPKLSASEALGSAALPSHSSAISQHSKGSTSPDLLMHQGPP
DTAEIIKSLPQKYRRKPMSQEEMEFIQRGGPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH