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Report for CCDS36103.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36103.1 Public Mus musculus 11 Ankrd48 23 108 98 CCDS HistoryNCBI Gene:76389Re-query CCDS DB by CCDS ID:36103.1Re-query CCDS DB by GeneID:76389See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 36103.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109856.7 ENSMUSP00000105482.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109856.7Link to Ensembl Protein Viewer:ENSMUSP00000105482.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000109856Re-query CCDS DB by Protein ID:ENSMUSP00000105482
Original member Current member NCBI NM_023816.3 NP_076305.2 Accepted alive Link to Nucleotide Sequence:NM_023816.3Link to Protein Sequence:NP_076305.2Re-query CCDS DB by Nucleotide ID:NM_023816Re-query CCDS DB by Protein ID:NP_076305Link to BLAST:NP_076305.2

Chromosomal Locations for CCDS 36103.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 5569927 5570129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5571057 5571171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5571286 5571459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5574227 5574333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5575639 5575776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5578584 5578653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5583958 5584043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5596714 5596780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5607110 5607232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5607324 5607427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5609352 5609409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5614525 5614631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5615520 5615578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5618475 5618511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5620078 5620147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5628327 5629406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5630702 5630795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5632139 5632209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5635028 5635387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5639100 5639185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5643680 5643850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5644834 5644867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5646887 5646959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5660643 5660838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5662353 5662527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5687291 5687482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 5689140 5689337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4248 nt):
ATGAAGAAGATCTTCAAGGGTCACTCGCCTTGGGGCTTTCTGAGCTTTAGGCATGCTGAGAACCAAGAAC
CTCCCAGGTACCTCACTGGGTACATGCCTGTGAAAAGGATCCACAAAGCTGCAAGCGTGGGGGACATACC
CCAAGTGCAGAAGATGCTCGAATTTGGGGATATTGACGTGAACGTTACAGACCGGAAGAAAAGGACTGCT
CTTCACTACGCCTGTGCTCACGGCCAGTCAGAAATGGTGAGCCTCTTGCTGTGGTATGACTGCAACATCG
AAGCCCGAGACCGAGAGGAAAGCACAGCTCTGATCAAGGCCACACAGCGCCAGCACGAGATCTGTGTGAA
GATTCTTCTAGAGAACGGCGCCGACTCCAACGCCGTCGATATCCATCAGAACACCTCCCTCCACTACACG
GTCTACAACAAGGACACCACCATAGCCGCCAAGCTTCTGGCATTCAATGCAGACACCGAAGTTAAGACAA
AGAACGGCTACACGCCGCTTATACTTGCGGTGCTAGAAAACAAACAGGAGATGGTGGAACTCTTACTGCA
GGCTGCAGCCAACATAAACGCCCTGGATAACTGCAAGAGGTCCGCCCTTATACATGCTGTGAGAACTCAG
TCTAAAAACATGATCAGCCTTCTTCTCCAGCAAGGCGCCAATGCATCTTTGGTGGACATCTATGGAGCTA
CTGCACAAAGTTACGCTGTTTTTGAAACCTTTCAAGTGCTTTCCCAAGGCCCTGGTCCCAGACCTGAGCT
AACAACAAAAGAGGCCAGACACAGTTTTGATACCAAGGATGGCCTTGTACCATGTTCACCCCGCTTCAAG
GAAGACAACAAAAGGATGGAGGAAAACACAGATGCAGTTGACGAGCTGGGGAGCTTTGCCCACAGACCTA
GTAACTCTGAGCCCATAGAAGAAGAAGATGAACCTAGCTTGAGTACCAAGCCTCCCGTGGTCCAGTCTCC
CGTGCTCACCGAGTCCAACCTCTGGGCTGGCTATCCGGCAGATTGGCCTGAACCCATTAAGTTCTCCAGG
CAGCCAGCAGTCTACAACCCAACCGAATGGAGGGAAGACATGGAATCCCGATCAGTTCCTCTAGAGAGCA
AACAGCAGGGTGCAGCCTTGCCGGGAAAGGAGGCAAACATACAGACACAGCAGCAGCTGCAGACCAGGGC
TTTCAAGGAGCCTGGTGCCAATGACCCTGACCTTCCATCAAGAGAGAATGCTAAGGATGAATTGGTGTCA
CTTTTAGCCCCTCTAGAGGAAAAAAAGCCACAAATGAAAGAATTTCCAGTAACTGAAGCTGCCAAGTTCC
AGACAGATGTCAAGCTGGAGAGAGAAGGTGTTTTAGAATTTGAAGAAAAGGGACTTGAAATTTGCCAAGA
CAGCAATCTAGAAGCAGCTGAAAGTACTGAGTCCTATTCAATTCTAAGGTTCGCCAAACCTGATGTTAGT
GACCCAGAGCCCACAGCAAGAAAGGATGAATATAAGCTTGATACAAAGGACGAGGATAGGTTAGAGAGGC
ATCTTCTGGCACCCAAGGCGTCCCAGCATCAAGCCAAGCAGACGAGCCCTCCACCTGTACAACTTCAAGA
AAGATCTCAGGGGCCAGAGATGGACACGGCTTCTGATGAGGAAGATACGTCTGGACTTTCAAAATCCGCT
AAGGGCCAAATACTTGGGGGAAAGTTGACATTAGGAGAAAACCCGGAGGGTAAAGAAACTGTACAGTGTG
TCATTAACAAGCCAACGCAGAAGGGTGACGAGATCTATGAAGATGTTAACGCTAATGTTTACCTCAAGGA
AGAGCGACCACCTGATGTCTCAGGAAAAACTCACCTGACGTCGGACCCCACTACCCTGGCCTACAATATG
TTTGATTGTGGCGACAGAGATGTGAGCGCTGCGCTGGTCTCTGTAACACTGCAGACCTCTCCCAGACAGG
AGGAAGGTGGCCTTGGAAATGCCTTTCCATCTCCCTCGTCCTCTCAGGACGTGGACTACAGTGGCCAGTC
ACTTACTAAGTTTCCCTTAATGAGAAATAAATTAGACTGTGAAAATAACGCATCTGAATTGGGAGAATCT
TTTCACAAAAGAAAAGAGAAATCTTCTAAAAACATTGAAAGCAGAAAGGTAAAAGGTAAGTGCCCAGAAG
TACGTATGGGTGAAAAGCAAGAAGGCCATGAGTTCAAGAGCCAGTCGCAAAAAACTATGAAACCAAAACG
CACCGACTGGCAGTTAGATATCAGACACATGCTGAAGTCCAGTGATGCCAACAGGCTTTCAAACGCCAAA
GAAAGGAGTCACGTGACCGAAGTAAAAAGTTGGGGTGATTCTGCCCTTGCAAGCGACATGTACAGGAAAA
GTAAAGGCACACAGGACCTGTTCCTGAAGCCACTGCCCTGCAAGGGCAATTTTGAAGCCCCAGCGCGCAC
CTTGGGAACCGCCAGTGATGCGCCCCCTGGTGGCCCAACAACTAGAGCTTTCGCGGATGAAGAACTGCGA
GGCAGGCTATCCGACAGTGAGTTCAGGATATTGGAGGAAGAGATCCTGGCCTGGGAGAAAGTCCACCTTG
AAAGCGAGAGTGTCTCTGAGAATCTGCTAAACAAGTGTGAGGGGATTATATCTGATGCCACAGATCAACA
AGGGCGATATCTAGATATGGAACAGGCAACAGAAGTGGATTCGGAGGGGACATCACAGCTGGAACAAAAG
AATCTTGACAGCAGCGAGAATACTCAGCCGTCGAATCCAGACCTCTCAAAGACGTGCCCACAAGCCCAGA
GCGCACCTGCAGATCCAACCACGCTGATCCAGCCCCTGCCTGAGGAGGAGAGCAAGCAGACTCACCCCCC
ATCTTTGCGTCTCAAAAAAATGTCTGAAGATCTTGAAATAAACACGAAAGATGACAAAGAATGTGCACCA
GGACATCCAGAAGTTCCTTCAGTGAAAGCGCATGGGAGAGAGTCTCTCACTGGAGACAGGAGAGGGCAGA
ACAGAGAGTCAAAGCAAAGCTGCCCTGAGCTGCAGCACACAGCCGCCGATGGGCTGGAAAGCATTTGTCC
CGTGGAGGATCCACTTCCGGGTGGCTGTAGAAGTCACTTCAAGGTTGAAGAAGTAAGCAGGAAGCAGCAG
AGTATGGACCTGGAAGTCTCAGAGCTGTCTCCTGCTGACGAGAAAGATGAACCTGCTAGGAGTGTTCCTG
ACTTGTGTATAAAAGACGCAAAGGGCAGTGAGAAGGAAGCATGGAGCCCCCGCGAGCCTGTGGTCACACC
GGAATTTGAGAAGTCCCCTCCAGCAGGTGCTGATCTGCTACTACTGAAGGATGGTCACCTTCTCACTAAA
ATGGATCGGGTTGAAGGAAGGCTGACAAAGAGAGAAGCTAAAGAAAAGCACAAGACGAAATCCCAAGTAA
ATGAAATGGAAGAAGCTAGCCATGGAAGTGAGCCTCGTGCGCCAGCCCCAGGCTGGGGTTCTGACAGCCC
ATTGAAGCTCTGGAACACAACTCACTCCGATGAAAGACTGATAGAGCTGAAGAATAGTCACTGCGAACTG
CTTACAAGAAAACCTGGGAAAATGGGAAATATGAGAGAACAGACAAAAGTTAAAAAAACAAAAACCTGGT
CACAGCATAAAGAAGTGGCATGGGACAAGCTCTGCACTCTGAGGTTCCCCTTAAAACAAGATGAGAAACA
AGAAAATGCTGAGTTAACGTTTCAACAAAAGAAGCCACAGTTACAAAGGGAAAAGGAGCAATGTGGTGGG
AGTGTGGAGTGGACTCAGCACTCTGAAATCAGGACAGTGATCGCAGAACTGAAGGCCCTAGAAAAGGACC
TGAGACAGTTTCACAATCTGAAAGAAAGTTGGGAGACTACATATTACAAATACCTACACATGGTCGTAAA
GCTTCAGTTTATCGAGCAGGAGCTGATAGGGATCAAAACAGAACAGAAGAAGTGTAGACACCTGCTCGAG
AACCAGAAGAACTTGGAAGAAGAAGTGCTCCACTTGAAAAGCTGGGTGCGGGAGAGCGAGATCCAAGCAA
GAGATCAAAACAACATCGAAAATTTAAGAGACACCAATGATGCAGCAATGATAAGCCAGATGGATCTCAG
AATTAAAAACATGGAATCTCAGCTAGCCACACGGGGAGCTCAGCGACGGCTCCTGGAGGAGGGATGCTTG
GACGTCAGCACCGCCATGCAGAAGAGGGTAGCCTGGCCCAGCCCGTGA

Translation (1415 aa):
MKKIFKGHSPWGFLSFRHAENQEPPRYLTGYMPVKRIHKAASVGDIPQVQKMLEFGDIDVNVTDRKKRTA
LHYACAHGQSEMVSLLLWYDCNIEARDREESTALIKATQRQHEICVKILLENGADSNAVDIHQNTSLHYT
VYNKDTTIAAKLLAFNADTEVKTKNGYTPLILAVLENKQEMVELLLQAAANINALDNCKRSALIHAVRTQ
SKNMISLLLQQGANASLVDIYGATAQSYAVFETFQVLSQGPGPRPELTTKEARHSFDTKDGLVPCSPRFK
EDNKRMEENTDAVDELGSFAHRPSNSEPIEEEDEPSLSTKPPVVQSPVLTESNLWAGYPADWPEPIKFSR
QPAVYNPTEWREDMESRSVPLESKQQGAALPGKEANIQTQQQLQTRAFKEPGANDPDLPSRENAKDELVS
LLAPLEEKKPQMKEFPVTEAAKFQTDVKLEREGVLEFEEKGLEICQDSNLEAAESTESYSILRFAKPDVS
DPEPTARKDEYKLDTKDEDRLERHLLAPKASQHQAKQTSPPPVQLQERSQGPEMDTASDEEDTSGLSKSA
KGQILGGKLTLGENPEGKETVQCVINKPTQKGDEIYEDVNANVYLKEERPPDVSGKTHLTSDPTTLAYNM
FDCGDRDVSAALVSVTLQTSPRQEEGGLGNAFPSPSSSQDVDYSGQSLTKFPLMRNKLDCENNASELGES
FHKRKEKSSKNIESRKVKGKCPEVRMGEKQEGHEFKSQSQKTMKPKRTDWQLDIRHMLKSSDANRLSNAK
ERSHVTEVKSWGDSALASDMYRKSKGTQDLFLKPLPCKGNFEAPARTLGTASDAPPGGPTTRAFADEELR
GRLSDSEFRILEEEILAWEKVHLESESVSENLLNKCEGIISDATDQQGRYLDMEQATEVDSEGTSQLEQK
NLDSSENTQPSNPDLSKTCPQAQSAPADPTTLIQPLPEEESKQTHPPSLRLKKMSEDLEINTKDDKECAP
GHPEVPSVKAHGRESLTGDRRGQNRESKQSCPELQHTAADGLESICPVEDPLPGGCRSHFKVEEVSRKQQ
SMDLEVSELSPADEKDEPARSVPDLCIKDAKGSEKEAWSPREPVVTPEFEKSPPAGADLLLLKDGHLLTK
MDRVEGRLTKREAKEKHKTKSQVNEMEEASHGSEPRAPAPGWGSDSPLKLWNTTHSDERLIELKNSHCEL
LTRKPGKMGNMREQTKVKKTKTWSQHKEVAWDKLCTLRFPLKQDEKQENAELTFQQKKPQLQREKEQCGG
SVEWTQHSEIRTVIAELKALEKDLRQFHNLKESWETTYYKYLHMVVKLQFIEQELIGIKTEQKKCRHLLE
NQKNLEEEVLHLKSWVRESEIQARDQNNIENLRDTNDAAMISQMDLRIKNMESQLATRGAQRRLLEEGCL
DVSTAMQKRVAWPSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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