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Report for CCDS13834.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13834.2 Public Homo sapiens 22 ASPHD2 24 110 108 CCDS HistoryNCBI Gene:57168Re-query CCDS DB by CCDS ID:13834.2Re-query CCDS DB by GeneID:57168See the combined annotation on chromosome 22 in Sequence Viewer

Public Note for CCDS 13834.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 13834.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000215906.6 ENSP00000215906.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000215906.6Link to Ensembl Protein Viewer:ENSP00000215906.5Re-query CCDS DB by Nucleotide ID:ENST00000215906Re-query CCDS DB by Protein ID:ENSP00000215906
Original member Current member NCBI NM_020437.5 NP_065170.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020437.5Link to Protein Sequence:NP_065170.2Re-query CCDS DB by Nucleotide ID:NM_020437Re-query CCDS DB by Protein ID:NP_065170Link to BLAST:NP_065170.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065170.2 369 Q6ICH7 369 100% 0 0

Chromosomal Locations for CCDS 13834.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 26433616 26434501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26442459 26442572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 26443097 26443206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGGTGTGGGCGCCCTTGGGACCCCCGAGGACTGATTGTCTGACCTTGCTTCACACGCCCAGTAAGGACT
CCCCCAAGATGTCGCTCGAGTGGCTGGTGGCCTGGAGCTGGTCGCTGGATGGCCTGAGGGACTGCATCGC
CACCGGCATCCAGTCCGTGCGGGACTGCGACACCACCGCTGTCATCACTGTGGCCTGCCTCCTGGTCCTC
TTCGTGTGGTACTGTTATCACGTGGGCAGGGAGCAGCCCCGGCCCTACGTCTCCGTCAACTCCCTCATGC
AGGCTGCCGATGCCAACGGGCTGCAGAATGGCTACGTGTACTGCCAGTCCCCTGAGTGCGTGCGCTGCAC
CCACAACGAGGGCCTCAACCAGAAGCTGTACCACAACCTGCAGGAGTACGCCAAGCGCTACTCCTGGTCC
GGCATGGGCCGCATCCACAAGGGCATCCGCGAGCAGGGCCGGTACCTCAACAGCCGGCCCTCCATCCAGA
AGCCCGAGGTCTTCTTCCTGCCCGACCTGCCCACCACGCCCTATTTCTCCCGGGACGCACAGAAACATGA
TGTGGAAGTGCTGGAACGGAACTTCCAGACCATCCTGTGTGAGTTTGAGACCCTCTACAAAGCTTTCTCA
AACTGCAGCCTCCCGCAAGGATGGAAAATGAACAGCACCCCCAGCGGGGAGTGGTTCACCTTTTACTTGG
TCAATCAGGGGGTTTGTGTTCCCAGGAACTGTAGGAAGTGCCCACGGACGTACCGCTTGCTCGGAAGCCT
TCGGACCTGTATTGGGAACAATGTTTTTGGGAACGCGTGCATCTCTGTGCTGAGCCCTGGGACTGTGATA
ACGGAGCACTATGGACCCACCAACATCCGCATCCGATGCCATTTAGGTCTGAAAACTCCAAATGGCTGTG
AGCTGGTGGTGGGGGGAGAGCCCCAGTGCTGGGCAGAAGGGCGCTGCCTTCTCTTTGATGACTCTTTCCT
GCATGCTGCGTTCCATGAAGGTTCAGCAGAGGATGGCCCACGGGTGGTTTTCATGGTGGATTTGTGGCAT
CCAAACGTCGCAGCGGCCGAACGGCAGGCTCTTGATTTCATCTTTGCTCCGGGACGATGA

Translation (369 aa):
MVWAPLGPPRTDCLTLLHTPSKDSPKMSLEWLVAWSWSLDGLRDCIATGIQSVRDCDTTAVITVACLLVL
FVWYCYHVGREQPRPYVSVNSLMQAADANGLQNGYVYCQSPECVRCTHNEGLNQKLYHNLQEYAKRYSWS
GMGRIHKGIREQGRYLNSRPSIQKPEVFFLPDLPTTPYFSRDAQKHDVEVLERNFQTILCEFETLYKAFS
NCSLPQGWKMNSTPSGEWFTFYLVNQGVCVPRNCRKCPRTYRLLGSLRTCIGNNVFGNACISVLSPGTVI
TEHYGPTNIRIRCHLGLKTPNGCELVVGGEPQCWAEGRCLLFDDSFLHAAFHEGSAEDGPRVVFMVDLWH
PNVAAAERQALDFIFAPGR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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