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Report for CCDS32723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32723.1 Public Homo sapiens 17 TMEM104 24 110 108 CCDS HistoryNCBI Gene:54868Re-query CCDS DB by CCDS ID:32723.1Re-query CCDS DB by GeneID:54868See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32723.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335464.10 ENSP00000334849.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335464.10Link to Ensembl Protein Viewer:ENSP00000334849.5Re-query CCDS DB by Nucleotide ID:ENST00000335464Re-query CCDS DB by Protein ID:ENSP00000334849
Original member Current member EBI ENST00000582330.2 ENSP00000461922.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000582330.2Link to Ensembl Protein Viewer:ENSP00000461922.1Re-query CCDS DB by Nucleotide ID:ENST00000582330Re-query CCDS DB by Protein ID:ENSP00000461922
Original member Current member NCBI NM_017728.4 NP_060198.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017728.4Link to Protein Sequence:NP_060198.3Re-query CCDS DB by Nucleotide ID:NM_017728Re-query CCDS DB by Protein ID:NP_060198Link to BLAST:NP_060198.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060198.3 496 Q8NE00-1 496 100% 0 0

Chromosomal Locations for CCDS 32723.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74777331 74777375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74785482 74785603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74788789 74788870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74790200 74790296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74790956 74791036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74795012 74795111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74795524 74795632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74819750 74819843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74835927 74836687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1491 nt):
ATGGCGGGTGAAATTACAGAGACCGGGGAACTCTACTCTTCCTACGTTGGGCTGGTGTACATGTTTAACC
TCATCGTGGGCACGGGCGCACTCACCATGCCCAAGGCATTCGCCACTGCCGGGTGGCTTGTCAGCCTCGT
CCTGCTGGTGTTCCTGGGCTTCATGAGCTTCGTGACCACCACCTTTGTGATAGAGGCCATGGCTGCAGCC
AACGCGCAGCTCCACTGGAAGAGGATGGAGAACCTCAAGGAGGAGGAAGATGACGACTCCTCCACAGCCT
CAGACAGCGATGTTCTCATCCGGGACAACTACGAGCGGGCAGAGAAGCGGCCCATCCTGTCTGTGCAGAG
ACGTGGATCTCCCAACCCGTTTGAAATCACAGACCGGGTGGAAATGGGACAAATGGCCTCCATGTTCTTC
AATAAAGTGGGGGTCAACTTGTTCTATTTCTGCATCATCGTTTACCTGTATGGAGACCTCGCCATCTATG
CTGCTGCCGTGCCCTTCTCCCTCATGCAGGTGACCTGCAGCGCCACTGGCAATGACTCCTGCGGTGTGGA
AGCAGACACCAAATACAATGACACTGACCGGTGCTGGGGGCCCCTGCGCCGAGTGGACGCCTACCGCATC
TACTTGGCGATCTTCACTCTCCTCCTCGGACCGTTCACCTTCTTTGACGTCCAGAAGACCAAGTACCTGC
AGATCCTGACCTCTCTGATGAGATGGATCGCTTTCGCCGTCATGATTGTGCTGGCCCTGATCCGCATCGG
GCACGGACAAGGGGAGGGGCACCCGCCCCTGGCTGACTTCTCGGGGGTCCGGAACCTGTTTGGGGTGTGC
GTCTACTCCTTCATGTGCCAGCACTCTCTGCCATCCCTCATTACCCCCGTCTCCTCCAAGCGCCACCTCA
CAAGGCTGGTGTTCCTGGACTACGTGCTGATCCTGGCCTTCTACGGCCTCCTCTCCTTCACCGCCATCTT
CTGCTTCCGCGGCGACAGCCTCATGGACATGTACACCCTCAACTTCGCGCGCTGTGACGTCGTGGGCCTG
GCCGCTGTGCGCTTTTTCCTGGGCCTCTTCCCCGTCTTCACCATCAGCACCAACTTCCCCATCATTGCCG
TGACCCTGCGCAACAACTGGAAGACACTCTTCCACCGCGAGGGCGGCACGTACCCGTGGGTGGTGGACCG
CGTCGTGTTTCCCACCATCACCCTGGTGCCGCCTGTGCTGGTGGCCTTCTGCACCCACGACCTGGAGTCC
CTGGTGGGCATCACAGGGGCCTACGCGGGCACCGGCATCCAGTACGTCATCCCCGCCTTCCTGGTGTACC
ACTGCCGCAGGGACACCCAGCTGGCCTTTGGCTGTGGGGTCAGCAACAAGCACAGGTCCCCTTTCCGCCA
CACCTTCTGGGTGGGCTTCGTGCTGCTCTGGGCTTTCTCCTGCTTCATTTTCGTCACGGCCAATATCATC
CTCAGCGAGACCAAGCTCTGA

Translation (496 aa):
MAGEITETGELYSSYVGLVYMFNLIVGTGALTMPKAFATAGWLVSLVLLVFLGFMSFVTTTFVIEAMAAA
NAQLHWKRMENLKEEEDDDSSTASDSDVLIRDNYERAEKRPILSVQRRGSPNPFEITDRVEMGQMASMFF
NKVGVNLFYFCIIVYLYGDLAIYAAAVPFSLMQVTCSATGNDSCGVEADTKYNDTDRCWGPLRRVDAYRI
YLAIFTLLLGPFTFFDVQKTKYLQILTSLMRWIAFAVMIVLALIRIGHGQGEGHPPLADFSGVRNLFGVC
VYSFMCQHSLPSLITPVSSKRHLTRLVFLDYVLILAFYGLLSFTAIFCFRGDSLMDMYTLNFARCDVVGL
AAVRFFLGLFPVFTISTNFPIIAVTLRNNWKTLFHREGGTYPWVVDRVVFPTITLVPPVLVAFCTHDLES
LVGITGAYAGTGIQYVIPAFLVYHCRRDTQLAFGCGVSNKHRSPFRHTFWVGFVLLWAFSCFIFVTANII
LSETKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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