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Report for CCDS939.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
939.1 Public Homo sapiens 1 BOLA1 24 110 108 CCDS HistoryNCBI Gene:51027Re-query CCDS DB by CCDS ID:939.1Re-query CCDS DB by GeneID:51027See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 939.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369150.1 ENSP00000358146.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369150.1Link to Ensembl Protein Viewer:ENSP00000358146.1Re-query CCDS DB by Nucleotide ID:ENST00000369150Re-query CCDS DB by Protein ID:ENSP00000358146
Original member Current member EBI ENST00000369152.6 ENSP00000358148.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369152.6Link to Ensembl Protein Viewer:ENSP00000358148.5Re-query CCDS DB by Nucleotide ID:ENST00000369152Re-query CCDS DB by Protein ID:ENSP00000358148
Original member Current member EBI ENST00000369153.2 ENSP00000358149.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369153.2Link to Ensembl Protein Viewer:ENSP00000358149.1Re-query CCDS DB by Nucleotide ID:ENST00000369153Re-query CCDS DB by Protein ID:ENSP00000358149
Original member Current member NCBI NM_001321025.2 NP_001307954.1 Accepted alive Link to Nucleotide Sequence:NM_001321025.2Link to Protein Sequence:NP_001307954.1Re-query CCDS DB by Nucleotide ID:NM_001321025Re-query CCDS DB by Protein ID:NP_001307954Link to BLAST:NP_001307954.1
Original member Current member NCBI NM_001321026.2 NP_001307955.1 Accepted alive Link to Nucleotide Sequence:NM_001321026.2Link to Protein Sequence:NP_001307955.1Re-query CCDS DB by Nucleotide ID:NM_001321026Re-query CCDS DB by Protein ID:NP_001307955Link to BLAST:NP_001307955.1
Original member Current member NCBI NM_016074.5 NP_057158.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016074.5Link to Protein Sequence:NP_057158.1Re-query CCDS DB by Nucleotide ID:NM_016074Re-query CCDS DB by Protein ID:NP_057158Link to BLAST:NP_057158.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001307954.1 137 Q9Y3E2 137 100% 0 0
NP_001307955.1 137 Q9Y3E2 137 100% 0 0
NP_057158.1 137 Q9Y3E2 137 100% 0 0

Chromosomal Locations for CCDS 939.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 149900060 149900473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (414 nt):
ATGCTGAGTGGGCGGCTGGTCCTGGGTCTGGTCTCCATGGCTGGCCGCGTTTGTTTGTGCCAGGGCAGCG
CGGGATCCGGGGCCATCGGTCCGGTGGAGGCCGCCATTCGCACGAAGTTGGAGGAGGCCCTGAGCCCCGA
GGTGCTAGAGCTTCGCAACGAGAGCGGTGGCCACGCGGTCCCGCCTGGCAGTGAGACTCACTTCCGCGTG
GCTGTGGTGAGCTCTCGTTTCGAGGGACTGAGCCCCCTACAACGACACCGGCTGGTCCACGCAGCGCTGG
CCGAGGAGCTGGGAGGTCCGGTCCATGCGCTGGCCATCCAGGCACGGACCCCCGCCCAGTGGAGAGAGAA
CTCTCAGCTGGACACTAGCCCCCCATGCCTGGGTGGGAACAAGAAAACTCTAGGAACCCCCTGA

Translation (137 aa):
MLSGRLVLGLVSMAGRVCLCQGSAGSGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRV
AVVSSRFEGLSPLQRHRLVHAALAEELGGPVHALAIQARTPAQWRENSQLDTSPPCLGGNKKTLGTP


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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