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Report for CCDS13917.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13917.1 Public Homo sapiens 22 MB 24 110 108 CCDS HistoryNCBI Gene:4151Re-query CCDS DB by CCDS ID:13917.1Re-query CCDS DB by GeneID:4151See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13917.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359787.5 ENSP00000352835.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359787.5Link to Ensembl Protein Viewer:ENSP00000352835.1Re-query CCDS DB by Nucleotide ID:ENST00000359787Re-query CCDS DB by Protein ID:ENSP00000352835
Original member Current member EBI ENST00000397326.7 ENSP00000380489.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397326.7Link to Ensembl Protein Viewer:ENSP00000380489.2Re-query CCDS DB by Nucleotide ID:ENST00000397326Re-query CCDS DB by Protein ID:ENSP00000380489
Original member Current member EBI ENST00000397328.5 ENSP00000380491.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397328.5Link to Ensembl Protein Viewer:ENSP00000380491.1Re-query CCDS DB by Nucleotide ID:ENST00000397328Re-query CCDS DB by Protein ID:ENSP00000380491
Original member Current member EBI ENST00000406324.5 ENSP00000384239.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406324.5Link to Ensembl Protein Viewer:ENSP00000384239.1Re-query CCDS DB by Nucleotide ID:ENST00000406324Re-query CCDS DB by Protein ID:ENSP00000384239
Original member Current member NCBI NM_001362846.2 NP_001349775.1 Accepted alive Link to Nucleotide Sequence:NM_001362846.2Link to Protein Sequence:NP_001349775.1Re-query CCDS DB by Nucleotide ID:NM_001362846Re-query CCDS DB by Protein ID:NP_001349775Link to BLAST:NP_001349775.1
Original member Current member NCBI NM_001382809.1 NP_001369738.1 Accepted alive Link to Nucleotide Sequence:NM_001382809.1Link to Protein Sequence:NP_001369738.1Re-query CCDS DB by Nucleotide ID:NM_001382809Re-query CCDS DB by Protein ID:NP_001369738Link to BLAST:NP_001369738.1
Original member Current member NCBI NM_001382810.1 NP_001369739.1 Accepted alive Link to Nucleotide Sequence:NM_001382810.1Link to Protein Sequence:NP_001369739.1Re-query CCDS DB by Nucleotide ID:NM_001382810Re-query CCDS DB by Protein ID:NP_001369739Link to BLAST:NP_001369739.1
Original member Current member NCBI NM_001382811.1 NP_001369740.1 Accepted alive Link to Nucleotide Sequence:NM_001382811.1Link to Protein Sequence:NP_001369740.1Re-query CCDS DB by Nucleotide ID:NM_001382811Re-query CCDS DB by Protein ID:NP_001369740Link to BLAST:NP_001369740.1
Original member Current member NCBI NM_005368.3 NP_005359.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005368.3Link to Protein Sequence:NP_005359.1Re-query CCDS DB by Nucleotide ID:NM_005368Re-query CCDS DB by Protein ID:NP_005359Link to BLAST:NP_005359.1
Original member Current member NCBI NM_203377.1 NP_976311.1 Accepted alive Link to Nucleotide Sequence:NM_203377.1Link to Protein Sequence:NP_976311.1Re-query CCDS DB by Nucleotide ID:NM_203377Re-query CCDS DB by Protein ID:NP_976311Link to BLAST:NP_976311.1
Original member Current member NCBI NM_203378.1 NP_976312.1 Accepted alive Link to Nucleotide Sequence:NM_203378.1Link to Protein Sequence:NP_976312.1Re-query CCDS DB by Nucleotide ID:NM_203378Re-query CCDS DB by Protein ID:NP_976312Link to BLAST:NP_976312.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001349775.1 154 P02144 154 100% 0 0
NP_001369738.1 154 P02144 154 100% 0 0
NP_001369739.1 154 P02144 154 100% 0 0
NP_001369740.1 154 P02144 154 100% 0 0
NP_005359.1 154 P02144 154 100% 0 0
NP_976311.1 154 P02144 154 100% 0 0
NP_976312.1 154 P02144 154 100% 0 0

Chromosomal Locations for CCDS 13917.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 35607297 35607443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 35610884 35611106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 35617163 35617257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGGGGCTCAGCGACGGGGAATGGCAGTTGGTGCTGAACGTCTGGGGGAAGGTGGAGGCTGACATCCCAG
GCCATGGGCAGGAAGTCCTCATCAGGCTCTTTAAGGGTCACCCAGAGACTCTGGAGAAGTTTGACAAGTT
CAAGCACCTGAAGTCAGAGGACGAGATGAAGGCGTCTGAGGACTTAAAGAAGCATGGTGCCACCGTGCTC
ACCGCCCTGGGTGGCATCCTTAAGAAGAAGGGGCATCATGAGGCAGAGATTAAGCCCCTGGCACAGTCGC
ATGCCACCAAGCACAAGATCCCCGTGAAGTACCTGGAGTTCATCTCGGAATGCATCATCCAGGTTCTGCA
GAGCAAGCATCCCGGGGACTTTGGTGCTGATGCCCAGGGGGCCATGAACAAGGCCCTGGAGCTGTTCCGG
AAGGACATGGCCTCCAACTACAAGGAGCTGGGCTTCCAGGGCTAG

Translation (154 aa):
MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASEDLKKHGATVL
TALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKHPGDFGADAQGAMNKALELFR
KDMASNYKELGFQG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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