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Report for CCDS92995.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92995.1 Public Homo sapiens 2 FAM240C 24 110 108 CCDS HistoryNCBI Gene:285095Re-query CCDS DB by CCDS ID:92995.1Re-query CCDS DB by GeneID:285095See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92995.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000401641.2 ENSP00000490196.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000401641.2Link to Ensembl Protein Viewer:ENSP00000490196.1Re-query CCDS DB by Nucleotide ID:ENST00000401641Re-query CCDS DB by Protein ID:ENSP00000490196
Original member Current member EBI ENST00000452112.5 ENSP00000490703.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000452112.5Link to Ensembl Protein Viewer:ENSP00000490703.2Re-query CCDS DB by Nucleotide ID:ENST00000452112Re-query CCDS DB by Protein ID:ENSP00000490703
Original member Current member NCBI NM_001382369.1 NP_001369298.1 Accepted alive Link to Nucleotide Sequence:NM_001382369.1Link to Protein Sequence:NP_001369298.1Re-query CCDS DB by Nucleotide ID:NM_001382369Re-query CCDS DB by Protein ID:NP_001369298Link to BLAST:NP_001369298.1
Original member Current member NCBI NM_001382370.1 NP_001369299.1 Accepted alive Link to Nucleotide Sequence:NM_001382370.1Link to Protein Sequence:NP_001369299.1Re-query CCDS DB by Nucleotide ID:NM_001382370Re-query CCDS DB by Protein ID:NP_001369299Link to BLAST:NP_001369299.1

Chromosomal Locations for CCDS 92995.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 241894213 241894339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 241897186 241897331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (273 nt):
ATGAGTAAAAGCCTCACTCTTAAGAATCCTGGAAGAGTAGCATACGATTCAGGCGGGATAAAGATGTTTT
GGGAGAAAAAAATCGAGCATCACGCAAGACACCTGCAGAACGAGGACATCAGGGTTCGCAGAAGCGCTCT
GAACAAGCTCCGCGTGGGATGGGCTGAGCAGCTGGAGGGGAGGAACAAGATGCTGCAGGGCCCAGGGAGA
TGCCCAGACAGGGTCCCGGAGGCCACTGAGTCCCTCCACACCAAGGACAAGAAGGCGGCCTGA

Translation (90 aa):
MSKSLTLKNPGRVAYDSGGIKMFWEKKIEHHARHLQNEDIRVRRSALNKLRVGWAEQLEGRNKMLQGPGR
CPDRVPEATESLHTKDKKAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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