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Report for CCDS93467.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93467.1 Public Homo sapiens 4 FAM193A 24 110 108 CCDS HistoryNCBI Gene:8603Re-query CCDS DB by CCDS ID:93467.1Re-query CCDS DB by GeneID:8603See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 93467.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000637812.2 ENSP00000490564.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000637812.2Link to Ensembl Protein Viewer:ENSP00000490564.1Re-query CCDS DB by Nucleotide ID:ENST00000637812Re-query CCDS DB by Protein ID:ENSP00000490564
Original member Current member NCBI NM_001366318.2 NP_001353247.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001366318.2Link to Protein Sequence:NP_001353247.1Re-query CCDS DB by Nucleotide ID:NM_001366318Re-query CCDS DB by Protein ID:NP_001353247Link to BLAST:NP_001353247.1

Chromosomal Locations for CCDS 93467.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 2536916 2537170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2596084 2596329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2625262 2625395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2626410 2626577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2630935 2631169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2639735 2639859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2646685 2646832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2657803 2657880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2659558 2659670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2659812 2660054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2662838 2662991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2663109 2663288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2672121 2672372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2689506 2689704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2690698 2690970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2693586 2693874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2694946 2695129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2696363 2696593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2699680 2700544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2716023 2716104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2731775 2731868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4548 nt):
ATGAGCCCAGCCGACGCCAAGCGCGGGGCCAAGCGCCGGAAGAACAAGCGGGGCGGCGGCGGCGGCTCGG
GCGGGGGTAACGGCGGCGCGAGCAGCGGCAAGGCCGGCCCGGCGGCGGCGCTGCGCGGTTCCCAGGCCGC
GGGCCTGGCGGCCCCGGGCAGCGCGGCAGGCCTGGTGGGCGGCGCGGCGGCGGCCAACGGGCCTCTCGGC
GCGGGCGCGAGCGCGGGCGGCGCCGCCCCCGGAGGCTACTTCGAGACTCCTTTTAGTTTTGGCATGAATC
ATAGGACACCACCCTACCCTGCTGGGGATTATTGTCTTCTGTGCAGAAGTGAACGGAAAGACTCATCATT
CTTAGAGAGTGGAATTAAGACTGCGAGCAAATTGGCCCTTTCCATGGCTCCCAAGGGCAACAGCGTGCTG
CACCTGCCACTGTGGGTGTGCCCGGACTGCCGCAGGACCGTGGAGAAGGAGGAGAGGCATGGCGGCCTTG
ACCAGCCAGTGAGCCAAGATTTTCTTCTTCACTCCTCGCTTGGTGGCTCCCAGCCAGAGGCCGGCAGTGG
TGGGAGGCTCGCTCTGGGTGCACAGACGCTGCCTTCAGACACCGCATGCTCGTGCGAGGCCTGCAGTGAG
CGCAGAGAAATTTCGGCAGAGGCGGACCGGGAACCTCAGCAGCTGCAGAACTACTGGTCAGAAGTGCGCT
ACACGGTGCGCTGCATCTACCGCCAGGCAGGAACCCCGCTGGCAGATGACCAGGACCAGTCTCTGGTGCC
TGACAAGGAGGGAGTGAAGGAGCTCGTGGATAGGCTCTGCGAGAGGGACCCCTACCAGCTGTACCAGCGT
CTGGAACAGCAAGCTCGAGAGTATGTGCTGGAGATGAAGGTCCGCCTGCTCCGGCAGCTGTCGGCTGCGG
CCAAGGTGAAGGCACCATCTGGCCTGCAGGGCCCGCCGCAAGCGCACCAGTTCATCTCCCTCCTGCTTGA
GGAGTACGGCGCCCTCTGCCAGGCCGCACGCTCCATCAGCACCTTCCTTGGCACTCTGGAAAATGAACAC
TTGAAAAAGTTCCAAGTGACGTGGGAACTGCATAATAAACACCTGTTTGAAAATCTGGTCTTTTCGGAGC
CACTTCTTCAGAGCAACTTGCCCGCACTGGTGTCACAGATCAGGCTAGGAACCACCACACACGACACCTG
CAGTGAGGACACATACAGTACCTTGCTGCAGAGGTACCAGCGTTCCGAGGAGGAGCTGCGCAGAGTCGCC
GAGGAGTGGCTGGAGTGCCAGAAGAGGATCGACGCCTATGTCGACGAGCAGATGACAATGAAAACCAAGC
AGCGCATGTTAACAGAAGACTGGGAGCTTTTTAAACAAAGAAGATTCATTGAAGAACAGTTAACCAATAA
GAAAGCAGTTACTGGCGAGAACAACTTCACAGACACCATGAGGCACATGTTATCGTCCCGGCTGAGCATG
CCCGACTGCCCCAACTGCAACTACAGGAGAAGATGTGCTTGCGATGACTGCAGTCTCTCACACATCCTCA
CGTGTGGTATCATGGACCCCCCCGTCACTGATGACATCCACATTCACCAGCTCCCACTTCAAGTGGATCC
TGCTCCTGACTATCTTGCTGAGAGGAGCCCGCCCAGTGTGTCATCTGCAAGCTCGGGGTCCGGCTCCAGC
TCTCCCATCACAATTCAGCAGCACCCCAGGCTCATCCTCACAGACAGTGGCTCGGCACCAACTTTTTGTA
GTGATGATGAAGATGTTGCACCATTGTCAGCCAAATTTGCTGATATTTATCCATTGAGTAATTATGATGA
TACCGAGGTGGTGGCCAACATGAATGGAATCCACAGCGAATTGAATGGTGGCGGGGAAAACATGGCCCTG
AAGGATGAGTCTCCTCAGATAAGCAGTACCAGCAGTAGTTCCTCAGAAGCTGATGATGAAGAAGCGGACG
GCGAGAGTAGTGGGGAGCCCCCAGGGGCCCCGAAGGAAGATGGAGTGCTGGGAAGCAGGAGCCCCAGGAC
AGAGGAGAGCAAAGCAGACAGTCCACCCCCATCCTACCCAACACAGCAGGCTGAACAAGCTCCAAACACT
TGTGAATGTCATGTTTGTAAGCAGGAAGCTTCTGGACTGACACCATCTGCAATGACAGCCGGAGCCCTTC
CTCCTGGCCATCAGTTCTTGAGCCCAGAGAAGCCCACACACCCTGCACTGCACCTTTACCCTCACATCCA
TGGACATGTGCCTTTGCACACTGTTCCACACCTGCCACGCCCTCTCATCCACCCCACCTTGTATGCAACG
CCCCCCTTCACACACAGTAAGGCTTTACCGCCAGCACCTGTTCAGAATCACACAAATAAGCATCAGGTAT
TCAATGCATCTCTTCAAGACCATATTTATCCGAGCTGTTTTGGGAATACTCCAGAGTGGAATAGTTCTAA
ATTTATAAGTCTTTGGGGATCAGAAGTGATGAATGATAAGAACTGGAATCCTGGCACTTTCTTGCCAGAT
ACAATTTCTGGGAGTGAAATATTAGGGCCAACACTCTCAGAAACAAGACCGGAAGCCCTTCCACCTCCAT
CTAGCAATGAAACACCTGCAGTCTCGGATAGTAAAGAGAAAAAGAATGCTGCAAAAAAGAAATGTTTATA
CAATTTCCAAGATGCTTTCATGGAAGCAAATAAAGTTGTCATGGCCACGTCATCAGCCACGTCCTCTGTG
TCCTGCACAGCTACCACAGTGCAGTCCAGCAACAGCCAGTTCAGAGTGTCATCCAAGAGACCTCCTTCAG
TAGGTGACGTGTTTCATGGCATCAGCAAGGAGGACCACAGACACTCGGCCCCAGCCGCCCCGAGGAATAG
CCCCACGGGCTTGGCCCCCCTCCCAGCGCTCTCGCCTGCTGCGCTGTCACCTGCTGCGCTCTCACCTGCC
TCCACACCTCACCTTGCAAATCTTGCAGCCCCATCATTCCCCAAAACAGCAACCACAACTCCTGGGTTTG
TGGACACACGCAAGAGTTTCTGTCCTGCACCCCTACCCCCGGCCACAGATGGCTCCATTAGCGCCCCTCC
AAGTGTCTGCAGTGACCCTGACTGCGAAGGGCACCGCTGCGAGAATGGTGTCTACGACCCACAGCAGGAT
GATGGGGACGAGAGTGCAGATGAGGACAGCTGCTCTGAGCACAGCTCCAGCACCTCGACCTCCACCAACC
AGAAGGAGGGCAAGTACTGCGACTGCTGCTACTGCGAATTCTTTGGGCACGGCGGGCCTCCAGCTGCACC
AACAAGTAGAAATTATGCAGAAATGAGGGAAAAGCTTCGCTTACGGCTGACCAAGAGGAAAGAGGAGCAA
CCTAAAAAAATGGACCAGATCTCAGAAAGGGAAAGCGTCGTTGACCATCGGAGGGTGGAGGATTTGTTGC
AGTTTATAAATAGCTCCGAAACCAAACCAGTGAGCAGCACGCGTGCAGCGAAGCGAGCAAGGCATAAGCA
AAGGAAGCTGGAGGAGAAAGCTCGCCTAGAAGCAGAGGCCAGGGCCCGGGAGCACCTGCACCTCCAGGAG
GAGCAGAGGCGGCGGGAGGAGGAGGAGGATGAGGAAGAAGAGGAGGATCGTTTCAAGGAGGAATTTCAGC
GGCTTCAGGAGCTTCAGAAGCTAAGAGCTGTAAAAAAGAAGAAGAAGGAGAGGCCAAGTAAAGACTGCCC
CAAGTTGGACATGCTCACTAGAAATTTCCAGGCAGCAACAGAGTCTGTTCCTAACTCTGGAAACATCCAC
AATGGCTCACTAGAGCAAACTGAAGAACCAGAAACCTCTTCTCACTCCCCATCCAGGCATATGAACCACT
CAGAGCCCAGGCCAGGGCTAGGGGCTGATGGGGATGCTGCAGACCCCGTCGACACCAGAGACTCCAAATT
TCTCCTCCCCAAGGAGGTGAATGGGAAGCAGCATGAGCCACTCTCTTTTTTCTTCGACATCATGCAGCAC
CATAAAGAAGGAAATGGCAAGCAGAAGCTGAGGCAGACCAGCAAGGCCAGCAGCGAGCCAGCGAGGAGGC
CCACAGAGCCCCCCAAGGCCACAGAGGGGCAGTCCAAGCCCCGGGCCCAGACTGAGTCAAAGGCTAAGGT
GGTCGACCTCATGTCCATCACAGAGCAGAAAAGAGAGGAGAGAAAAGTCAACAGTAATAACAATAACAAA
AAGCAGCTGAACCACATCAAGGACGAAAAGTCAAACCCAACCCCTATGGAGCCCACCTCTCCCGGTGAGC
ATCAGCAGAACAGCAAGCTGGTGCTGGCAGAGTCCCCTCAGCCAAAGGGCAAGAACAAGAAAAATAAGAA
GAAGAAAGGAGACAGAGTCAACAATTCAATTGATGATGTCTTTCTACCTAAAGATATTGACCTAGACAGT
GTGGATATGGATGAGACAGAGAGGGAAGTGGAATATTTCAAAAGGTTCTGCTTGGATTCTGCTAGACAGA
CCCGACAAAGACTGTCTATCAACTGGTCCAATTTTAGCTTGAAAAAAGCCACCTTTGCTGCCCACTGA

Translation (1515 aa):
MSPADAKRGAKRRKNKRGGGGGSGGGNGGASSGKAGPAAALRGSQAAGLAAPGSAAGLVGGAAAANGPLG
AGASAGGAAPGGYFETPFSFGMNHRTPPYPAGDYCLLCRSERKDSSFLESGIKTASKLALSMAPKGNSVL
HLPLWVCPDCRRTVEKEERHGGLDQPVSQDFLLHSSLGGSQPEAGSGGRLALGAQTLPSDTACSCEACSE
RREISAEADREPQQLQNYWSEVRYTVRCIYRQAGTPLADDQDQSLVPDKEGVKELVDRLCERDPYQLYQR
LEQQAREYVLEMKVRLLRQLSAAAKVKAPSGLQGPPQAHQFISLLLEEYGALCQAARSISTFLGTLENEH
LKKFQVTWELHNKHLFENLVFSEPLLQSNLPALVSQIRLGTTTHDTCSEDTYSTLLQRYQRSEEELRRVA
EEWLECQKRIDAYVDEQMTMKTKQRMLTEDWELFKQRRFIEEQLTNKKAVTGENNFTDTMRHMLSSRLSM
PDCPNCNYRRRCACDDCSLSHILTCGIMDPPVTDDIHIHQLPLQVDPAPDYLAERSPPSVSSASSGSGSS
SPITIQQHPRLILTDSGSAPTFCSDDEDVAPLSAKFADIYPLSNYDDTEVVANMNGIHSELNGGGENMAL
KDESPQISSTSSSSSEADDEEADGESSGEPPGAPKEDGVLGSRSPRTEESKADSPPPSYPTQQAEQAPNT
CECHVCKQEASGLTPSAMTAGALPPGHQFLSPEKPTHPALHLYPHIHGHVPLHTVPHLPRPLIHPTLYAT
PPFTHSKALPPAPVQNHTNKHQVFNASLQDHIYPSCFGNTPEWNSSKFISLWGSEVMNDKNWNPGTFLPD
TISGSEILGPTLSETRPEALPPPSSNETPAVSDSKEKKNAAKKKCLYNFQDAFMEANKVVMATSSATSSV
SCTATTVQSSNSQFRVSSKRPPSVGDVFHGISKEDHRHSAPAAPRNSPTGLAPLPALSPAALSPAALSPA
STPHLANLAAPSFPKTATTTPGFVDTRKSFCPAPLPPATDGSISAPPSVCSDPDCEGHRCENGVYDPQQD
DGDESADEDSCSEHSSSTSTSTNQKEGKYCDCCYCEFFGHGGPPAAPTSRNYAEMREKLRLRLTKRKEEQ
PKKMDQISERESVVDHRRVEDLLQFINSSETKPVSSTRAAKRARHKQRKLEEKARLEAEARAREHLHLQE
EQRRREEEEDEEEEEDRFKEEFQRLQELQKLRAVKKKKKERPSKDCPKLDMLTRNFQAATESVPNSGNIH
NGSLEQTEEPETSSHSPSRHMNHSEPRPGLGADGDAADPVDTRDSKFLLPKEVNGKQHEPLSFFFDIMQH
HKEGNGKQKLRQTSKASSEPARRPTEPPKATEGQSKPRAQTESKAKVVDLMSITEQKREERKVNSNNNNK
KQLNHIKDEKSNPTPMEPTSPGEHQQNSKLVLAESPQPKGKNKKNKKKKGDRVNNSIDDVFLPKDIDLDS
VDMDETEREVEYFKRFCLDSARQTRQRLSINWSNFSLKKATFAAH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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