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Report for CCDS17086.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17086.1 Public Mus musculus 2 Sulf2 23 108 98 CCDS HistoryNCBI Gene:72043Re-query CCDS DB by CCDS ID:17086.1Re-query CCDS DB by GeneID:72043See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17086.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000088086.3 ENSMUSP00000085405.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000088086.3Link to Ensembl Protein Viewer:ENSMUSP00000085405.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000088086Re-query CCDS DB by Protein ID:ENSMUSP00000085405
Original member Current member EBI ENSMUST00000109249.8 ENSMUSP00000104872.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109249.8Link to Ensembl Protein Viewer:ENSMUSP00000104872.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109249Re-query CCDS DB by Protein ID:ENSMUSP00000104872
Original member Current member EBI ENSMUST00000146497.8 ENSMUSP00000154557.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000146497.8Link to Ensembl Protein Viewer:ENSMUSP00000154557.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000146497Re-query CCDS DB by Protein ID:ENSMUSP00000154557
Original member Current member NCBI NM_001252578.1 NP_001239507.1 Accepted alive Link to Nucleotide Sequence:NM_001252578.1Link to Protein Sequence:NP_001239507.1Re-query CCDS DB by Nucleotide ID:NM_001252578Re-query CCDS DB by Protein ID:NP_001239507Link to BLAST:NP_001239507.1
Original member Current member NCBI NM_001355619.1 NP_001342548.1 Accepted alive Link to Nucleotide Sequence:NM_001355619.1Link to Protein Sequence:NP_001342548.1Re-query CCDS DB by Nucleotide ID:NM_001355619Re-query CCDS DB by Protein ID:NP_001342548Link to BLAST:NP_001342548.1
Original member Current member NCBI NM_028072.5 NP_082348.2 Accepted alive Link to Nucleotide Sequence:NM_028072.5Link to Protein Sequence:NP_082348.2Re-query CCDS DB by Nucleotide ID:NM_028072Re-query CCDS DB by Protein ID:NP_082348Link to BLAST:NP_082348.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001239507.1 875 Q8CFG0 875 100% 0 0
NP_001342548.1 875 Q8CFG0 875 100% 0 0
NP_082348.2 875 Q8CFG0 875 100% 0 0

Chromosomal Locations for CCDS 17086.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 166074788 166074818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166075495 166075548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166075772 166075805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166077518 166077641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166079037 166079179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166079460 166079629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166080017 166080076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166080797 166080891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166081287 166081383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166081478 166081706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166082574 166082784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166083856 166083985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166084386 166084442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166085683 166085811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166086986 166087161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166089198 166089348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166093455 166093624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166094478 166094629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166116872 166117111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 166132588 166132762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2628 nt):
ATGGCACCCCCTGGCCTGCCACTATGGCTGCTGTCCACCGCTCTCCTCTCCCTGCTGGCTGGCAGCTCGG
CCTTCCTCTCCCATCCCCGCCTGAAGGGACGCTTCCAGAGGGACCGCAGGAACATCCGGCCCAACATCAT
CTTGGTGCTTACGGATGACCAGGATGTGGAGCTGGGCTCCATGCAAGTGATGAACAAGACAAGGCGTATC
ATGGAGCAGGGCGGGGCGCACTTCATCAATGCCTTCGTGACTACACCAATGTGCTGTCCGTCTCGCTCCT
CCATTCTCACCGGCAAGTACGTCCACAACCACAACACCTACACCAACAATGAGAATTGTTCCTCGCCCTC
CTGGCAGGCCCAGCACGAGAGCCGCACCTTCGCCGTGTATCTCAACAGCACAGGCTACCGGACAGCTTTC
TTCGGAAAATACCTCAATGAGTACAACGGCTCATACGTGCCGCCCGGCTGGAAGGAGTGGGTCGGCCTAC
TTAAGAACTCCCGCTTTTATAACTACACACTCTGCCGGAATGGGGTGAAGGAGAAACATGGCTCAGACTA
CTCCACGGATTACCTCACGGATCTCATCACCAATGACAGTGTGAGCTTCTTCCGAACATCCAAGAAGATG
TACCCACACAGGCCCGTGCTCATGGTCATCAGCCACGCGGCTCCCCATGGCCCCGAGGACTCAGCACCCC
AGTACTCACGGCTCTTCCCCAATGCGTCCCAGCACATCACACCGAGTTACAACTATGCACCCAACCCAGA
CAAGCATTGGATCATGCGCTACACGGGACCCATGAAGCCCATTCACATGGAATTCACCAACATGCTACAA
CGAAAACGCCTACAGACCCTCATGTCTGTGGATGACTCCATGGAGACGATCTATGACATGCTGGTGGAGA
CGGGGGAGCTGGACAACACGTACATCCTGTACACCGCCGACCACGGCTACCACATTGGCCAGTTTGGGCT
GGTGAAGGGCAAGTCTATGCCGTATGAATTCGACATCAGAGTCCCGTTCTACGTGAGGGGCCCCAACGTG
GAAGCTGGCTCTCTGAACCCCCACATTGTCCTCAACATTGACCTGGCCCCCACCATACTGGATATCGCTG
GACTGGACATCCCTGCAGACATGGACGGGAAGTCTATTCTCAAACTACTGGACTCAGAGCGGCCAGTGAA
CCGGTTCCACTTGAAAAAGAAGCTGAGGGTCTGGCGAGACTCCTTCCTGGTGGAGAGAGGCAAACTGCTC
CACAAGAGGGAGGGTGACAAAGTGAATGCCCAGGAGGAGAACTTCCTGCCCAAGTACCAGCGCGTGAAGG
ACCTGTGTCAGCGAGCTGAGTACCAGACAGCATGCGAACAGCTGGGGCAGAAGTGGCAGTGTGTGGAGGA
CGCTTCTGGGACGCTGAAGCTGCACAAATGTAAAGGCCCCATGCGGTTTGGTGGCGGCGGTGGCAGCAGA
GCCCTCTCCAACCTGGTGCCCAAGTATGACGGCCAGAGCAGCGAGGCCTGCAGCTGTGACAGTGGCGGTG
GAGGGGACTACAAACTGGGCCTGGCTGGACGCCGTAAGCTCTTTAAGAAAAAGTATAAGACCAGCTATGC
CCGGAACCGCTCCATCCGTTCCGTGGCCATCGAGGTGGACGGTGAGATATACCACGTAGGCTTGGATACT
GTGCCTCAGCCCCGCAACCTTAGCAAGCCGCACTGGCCAGGGGCCCCTGAAGACCAAGATGACAAGGATG
GTGGCAGTTTCAGTGGTACTGGTGGCCTTCCAGATTATTCTGCCCCCAATCCCATCAAAGTGACCCATCG
GTGCTACATCCTTGAGAATGACACAGTCCAGTGCGACTTGGACCTGTACAAGTCCCTGCAGGCTTGGAAA
GACCACAAGCTGCACATCGACCATGAGATCGAAACCCTGCAGAACAAAATTAAGAACCTTCGAGAAGTCA
GGGGTCACCTGAAGAAGAAGCGACCGGAAGAATGTGACTGCCATAGAATCAGTTACCACAGCCAACACAA
AGGCCGTCTCAAGCACAAAGGCTCCAGCCTGCACCCTTTCAGGAAGGGTCTGCAGGAGAAGGACAAGGTG
TGGCTGCTGCGGGAGCAGAAACGCAAGAAGAAACTGCGCAAGCTGCTCAAACGGCTGCAGAACAACGATA
CGTGCAGCATGCCCGGCCTCACGTGCTTTACCCACGACAACCACCACTGGCAGACGGCGCCACTCTGGAC
GCTGGGGCCGTTCTGCGCCTGCACCAGCGCCAACAACAACACGTACTGGTGCTTGAGGACCATAAATGAG
ACCCACAACTTCCTCTTCTGCGAATTTGCAACCGGCTTCATAGAATACTTTGACCTCAGTACAGACCCCT
ACCAGCTGATGAACGCGGTGAACACACTGGACAGGGACGTCCTTAACCAACTGCACGTGCAGCTCATGGA
GCTAAGGAGCTGTAAAGGCTACAAGCAGTGCAACCCCCGGACCCGCAACATGGACCTGGGGCTTAGAGAC
GGAGGAAGCTATGAACAATACAGGCAGTTTCAGCGTCGAAAATGGCCAGAAATGAAGAGACCTTCTTCCA
AATCACTGGGACAGCTATGGGAAGGTTGGGAAGGCTAA

Translation (875 aa):
MAPPGLPLWLLSTALLSLLAGSSAFLSHPRLKGRFQRDRRNIRPNIILVLTDDQDVELGSMQVMNKTRRI
MEQGGAHFINAFVTTPMCCPSRSSILTGKYVHNHNTYTNNENCSSPSWQAQHESRTFAVYLNSTGYRTAF
FGKYLNEYNGSYVPPGWKEWVGLLKNSRFYNYTLCRNGVKEKHGSDYSTDYLTDLITNDSVSFFRTSKKM
YPHRPVLMVISHAAPHGPEDSAPQYSRLFPNASQHITPSYNYAPNPDKHWIMRYTGPMKPIHMEFTNMLQ
RKRLQTLMSVDDSMETIYDMLVETGELDNTYILYTADHGYHIGQFGLVKGKSMPYEFDIRVPFYVRGPNV
EAGSLNPHIVLNIDLAPTILDIAGLDIPADMDGKSILKLLDSERPVNRFHLKKKLRVWRDSFLVERGKLL
HKREGDKVNAQEENFLPKYQRVKDLCQRAEYQTACEQLGQKWQCVEDASGTLKLHKCKGPMRFGGGGGSR
ALSNLVPKYDGQSSEACSCDSGGGGDYKLGLAGRRKLFKKKYKTSYARNRSIRSVAIEVDGEIYHVGLDT
VPQPRNLSKPHWPGAPEDQDDKDGGSFSGTGGLPDYSAPNPIKVTHRCYILENDTVQCDLDLYKSLQAWK
DHKLHIDHEIETLQNKIKNLREVRGHLKKKRPEECDCHRISYHSQHKGRLKHKGSSLHPFRKGLQEKDKV
WLLREQKRKKKLRKLLKRLQNNDTCSMPGLTCFTHDNHHWQTAPLWTLGPFCACTSANNNTYWCLRTINE
THNFLFCEFATGFIEYFDLSTDPYQLMNAVNTLDRDVLNQLHVQLMELRSCKGYKQCNPRTRNMDLGLRD
GGSYEQYRQFQRRKWPEMKRPSSKSLGQLWEGWEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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