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Report for CCDS75760.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75760.1 Public Homo sapiens 8 RALYL 24 110 108 CCDS HistoryNCBI Gene:138046Re-query CCDS DB by CCDS ID:75760.1Re-query CCDS DB by GeneID:138046See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75760.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000518566.5 ENSP00000430065.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000518566.5Link to Ensembl Protein Viewer:ENSP00000430065.1Re-query CCDS DB by Nucleotide ID:ENST00000518566Re-query CCDS DB by Protein ID:ENSP00000430065
Original member Current member NCBI NM_001287243.3 NP_001274172.1 Accepted alive Link to Nucleotide Sequence:NM_001287243.3Link to Protein Sequence:NP_001274172.1Re-query CCDS DB by Nucleotide ID:NM_001287243Re-query CCDS DB by Protein ID:NP_001274172Link to BLAST:NP_001274172.1
Original member Current member NCBI NM_001354307.2 NP_001341236.1 Accepted alive Link to Nucleotide Sequence:NM_001354307.2Link to Protein Sequence:NP_001341236.1Re-query CCDS DB by Nucleotide ID:NM_001354307Re-query CCDS DB by Protein ID:NP_001341236Link to BLAST:NP_001341236.1
Original member Current member NCBI NM_001354309.2 NP_001341238.1 Accepted alive Link to Nucleotide Sequence:NM_001354309.2Link to Protein Sequence:NP_001341238.1Re-query CCDS DB by Nucleotide ID:NM_001354309Re-query CCDS DB by Protein ID:NP_001341238Link to BLAST:NP_001341238.1
Original member Current member NCBI NM_001354312.2 NP_001341241.1 Accepted alive Link to Nucleotide Sequence:NM_001354312.2Link to Protein Sequence:NP_001341241.1Re-query CCDS DB by Nucleotide ID:NM_001354312Re-query CCDS DB by Protein ID:NP_001341241Link to BLAST:NP_001341241.1
Original member Current member NCBI NM_001354315.2 NP_001341244.1 Accepted alive Link to Nucleotide Sequence:NM_001354315.2Link to Protein Sequence:NP_001341244.1Re-query CCDS DB by Nucleotide ID:NM_001354315Re-query CCDS DB by Protein ID:NP_001341244Link to BLAST:NP_001341244.1
Original member Current member NCBI NM_001354317.2 NP_001341246.1 Accepted alive Link to Nucleotide Sequence:NM_001354317.2Link to Protein Sequence:NP_001341246.1Re-query CCDS DB by Nucleotide ID:NM_001354317Re-query CCDS DB by Protein ID:NP_001341246Link to BLAST:NP_001341246.1
Original member Current member NCBI NM_001354318.2 NP_001341247.1 Accepted alive Link to Nucleotide Sequence:NM_001354318.2Link to Protein Sequence:NP_001341247.1Re-query CCDS DB by Nucleotide ID:NM_001354318Re-query CCDS DB by Protein ID:NP_001341247Link to BLAST:NP_001341247.1

Chromosomal Locations for CCDS 75760.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 84529322 84529577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84774579 84774654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84849980 84850027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84862296 84862453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84873284 84873397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84887604 84887776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 84920894 84920911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (843 nt):
ATGACTGGCAAAACACAGACCAGCAACGTCACCAATAAGAATGACCCCAAGTCCATCAACTCCCGTGTTT
TCATCGGCAATCTAAATACGGCAATTGTCAAGAAAGTTGACATTGAAGCCATTTTTTCAAAGTATGGAAA
AATAGTTGGATGTTCCGTTCACAAAGGTTATGCATTTGTACAGTACATGAGTGAGCGACATGCAAGAGCT
GCAGTGGCTGGAGAAAATGCCAGAGTCATCGCCGGCCAACCACTTGATATCAACATGGCAGGAGAGCCCA
AACCATACAGACCAAAACCTGGAAACAAGAGGCCCCTTTCTGCACTTTACAGCGGTTATGTCTTTGACTA
TGATTACTACAGAGATGATTTCTACAATCGGTTATTTGATTACCACGGGCGTGTGCCTCCACCTCCCCGT
GCAGTAATTCCGCTGAAGCGTCCCAGAGTGGCAGTCACAACGACTCGCAGGGGGAAAGGAGTCTTTTCCA
TGAAAGGTGGATCGAGATCTACTGCCAGTGGGTCAACAGGTTCTAAATTGAAATCAGATGAGTTACAGAC
CATCAAGAAAGAATTAACCCAGATCAAAACTAAAATTGACTCCTTGCTAGGGCGCCTGGAGAAGATTGAG
AAACAGCAGAAGGCGGAGGCAGAAGCTCAGAAGAAGCAATTGGAAGAGAGTCTAGTGCTGATCCAAGAGG
AATGTGTGTCAGAGATTGCAGATCACTCTACAGAGGAGCCTGCTGAAGGAGGGCCAGATGCCGATGGAGA
AGAGATGACAGATGGGATAGAGGAGGACTTCGATGAAGATGGGGGTCATGAGCTGTTTCTACAGATAAAG
TGA

Translation (280 aa):
MTGKTQTSNVTNKNDPKSINSRVFIGNLNTAIVKKVDIEAIFSKYGKIVGCSVHKGYAFVQYMSERHARA
AVAGENARVIAGQPLDINMAGEPKPYRPKPGNKRPLSALYSGYVFDYDYYRDDFYNRLFDYHGRVPPPPR
AVIPLKRPRVAVTTTRRGKGVFSMKGGSRSTASGSTGSKLKSDELQTIKKELTQIKTKIDSLLGRLEKIE
KQQKAEAEAQKKQLEESLVLIQEECVSEIADHSTEEPAEGGPDADGEEMTDGIEEDFDEDGGHELFLQIK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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