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Report for CCDS57546.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57546.1 Public Mus musculus 7 Acp4 23 108 98 CCDS HistoryNCBI Gene:100503991Re-query CCDS DB by CCDS ID:57546.1Re-query CCDS DB by GeneID:100503991See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 57546.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000118216.7 ENSMUSP00000112922.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000118216.7Link to Ensembl Protein Viewer:ENSMUSP00000112922.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000118216Re-query CCDS DB by Protein ID:ENSMUSP00000112922
Original member Current member NCBI NM_001195034.1 NP_001181963.1 Accepted alive Link to Nucleotide Sequence:NM_001195034.1Link to Protein Sequence:NP_001181963.1Re-query CCDS DB by Nucleotide ID:NM_001195034Re-query CCDS DB by Protein ID:NP_001181963Link to BLAST:NP_001181963.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001181963.1 425 D3YTS9 425 100% 0 0

Chromosomal Locations for CCDS 57546.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44253087 44253199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44253278 44253456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44253544 44253671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44254031 44254113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44254202 44254334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44254996 44255091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44255171 44255269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44255849 44255995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44256750 44256836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44256914 44257018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44257097 44257204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1278 nt):
ATGGCTGAGCCCGGGTCTCAGGGCCACACCGTCGGACCCTTGCTGCTGCTGCTGTTGCTGTTGCTGCCTC
GGGCCCTGCCGGAGGGGCCCCTGTTATTTGTGGCTCTGGTGTTCCGACATGGCGACCGGGCCCCACTGGC
CTCCTACCCCACAGATCCACACAAGGAAGCTGCCTCCACCTTGTGGCCTCGAGGCTTGGGCCAACTGACT
AAGGAGGGGATCCGCCAGCAGCTAGAACTGGGCCGATTTCTGAGGAGGCGTTACAAGGCTTTCCTGAGCC
CTGAGTACAAGCGAGAAGAGGTGTACATCCGCAGCACAGACTTTGACCGGACATTGGAGAGTGCACAAGC
CAACCTGGCTGGGCTCTTCCCTGAGGCTGCCCCTGGAAGTCCTGAGACTGACTGGAAGCCCATTCCAGTG
CACACAGTGCCTGTGTCTGAGGACAAGTTGCTGAGGTTCCCCATGCGCAGCTGTCCTCGATACCATGAGC
TGTTACGAGAGTCCACAGAGGCAGCTGACTACCAGGAGGCCCTGGAGGGCTGGACGGACTTCCTGACCCG
CCTGGGCAACTTCACTGGGCTGTCCCTGGTTGGAGAGCCACTCCGGAGAGCATGGAAAGTTCTGGATACC
TTGATCTGCCAGCGTGCCCATGGTCTTGACCTTCCATCCTGGGCCTCTCCAGATGTCTTGAGGACTCTGT
CACAGATTTCTGCTCTGGATATCAGGGCCCATGTAGGCCCACCCCGAGCAGCAGAAAAGGCCCAGCTGAC
AGGGGGGATCCTGCTGGATGCTATTCTCAGCAATTTCTCCCGGACCCAGCGCCTTGGGTTGCCCCTCAAG
ATGGTCATGTACTCAGCTCATGACAGCACCCTGCTGGCCCTCCAGGGGGCCCTGGGCCTCTACGATGGGA
ACACCCCACCTTACGCTGCCTGCATGGCCTTTGAATTCCGGGGGAGCTCCAGGGAACCCGAGGAGGAAGA
TGGAGAGAATGTCACTGTCTCTCTCATCTACCGCAATGACACCTCCCGCCCACCCCTGCCACTCAGGGTC
CCTGGGTGCCCAGCTCCCTGTCCACTTGGGCGCTTCCAGCAGCTGACTGCTCCAGCCCGGCCTCCAGCCC
ATGGGGCCCCCTGCCATGGTTCTTATGAGCCTGCCAGCCCCCCAGCCACGGTGCCCCTGCTGGCCGGAGC
TGTGGCTGTGCTGGCCGTGCTAAGCCTGGGGCTTGGTCTTCTGGCCTGGAGGCCCAGATGCCTGCGGGCC
CTGGGAGGGACTGTGTGA

Translation (425 aa):
MAEPGSQGHTVGPLLLLLLLLLPRALPEGPLLFVALVFRHGDRAPLASYPTDPHKEAASTLWPRGLGQLT
KEGIRQQLELGRFLRRRYKAFLSPEYKREEVYIRSTDFDRTLESAQANLAGLFPEAAPGSPETDWKPIPV
HTVPVSEDKLLRFPMRSCPRYHELLRESTEAADYQEALEGWTDFLTRLGNFTGLSLVGEPLRRAWKVLDT
LICQRAHGLDLPSWASPDVLRTLSQISALDIRAHVGPPRAAEKAQLTGGILLDAILSNFSRTQRLGLPLK
MVMYSAHDSTLLALQGALGLYDGNTPPYAACMAFEFRGSSREPEEEDGENVTVSLIYRNDTSRPPLPLRV
PGCPAPCPLGRFQQLTAPARPPAHGAPCHGSYEPASPPATVPLLAGAVAVLAVLSLGLGLLAWRPRCLRA
LGGTV


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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