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Report for CCDS41100.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41100.1 Public Mus musculus X Brwd3 23 108 98 CCDS HistoryNCBI Gene:382236Re-query CCDS DB by CCDS ID:41100.1Re-query CCDS DB by GeneID:382236See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41100.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000150434.7 ENSMUSP00000123588.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000150434.7Link to Ensembl Protein Viewer:ENSMUSP00000123588.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000150434Re-query CCDS DB by Protein ID:ENSMUSP00000123588
Original member Current member NCBI NM_001081477.2 NP_001074946.1 Accepted alive Link to Nucleotide Sequence:NM_001081477.2Link to Protein Sequence:NP_001074946.1Re-query CCDS DB by Nucleotide ID:NM_001081477Re-query CCDS DB by Protein ID:NP_001074946Link to BLAST:NP_001074946.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074946.1 1799 A2AHJ4-1 1799 100% 0 0

Chromosomal Locations for CCDS 41100.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 108743016 108743770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108749283 108749441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108750231 108750328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108750689 108750852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108752818 108752970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108754240 108754311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108755416 108755556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108756346 108756402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108757520 108757598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108757684 108757809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108758849 108758969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108759606 108759761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108759871 108759932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108760299 108760410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108761236 108761318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108762073 108762197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108765130 108765237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108767949 108768062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108768886 108769051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108769739 108769815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108771521 108771670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108773311 108773404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108774827 108775010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108778247 108778414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108779896 108780121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108784112 108784240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108785647 108785781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108789733 108789886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108791145 108791249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108794302 108794342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108796746 108796846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108798029 108798099 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108798755 108798855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108803982 108804203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108805437 108805597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108824806 108824904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108825345 108825495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108833214 108833273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108833677 108833706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108833908 108833966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 108834099 108834129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5400 nt):
ATGGCGGCGGCACCTACCCAGATCGAAGCCGAGCTGTATTACCTGATCGCAAGGTTCTTGCAGTCCGGAC
CCTGTAACAAATCCGCTCAGGTGCTAGTGCAAGAGCTCGAAGAGCATCAGCTGATTCCGCGCCGCTTAGA
CTGGGAAGGGAAAGAGCACCGAAGAAGCTTCGAGGATCTGGTGGCAGCCAATGCACACATTCCTCCAGAC
TACCTCCTTAAAATTTGTGAGAGGATTGGCCCTTTATTAGATAAGGAAATCCCTCAGAGTGTTCCTGGGG
TACAGACATTACTAGGTGTCGGTCGGCAGTCTCTGTTACGGGATGCCAAAGACTGTAAGAGTACACTATG
GAATGGGTCTGCTTTTGCAGCCCTCCACAGAGGCAGACCCCCAGAACTACCTGTAAATTATGTGAAACCT
CCAAACGTGGTGAATATCACCTCAGCCAGGCAATTAACCGGATGTAGTCGCTTCAGCCATGTTTTCCCCT
CATCTGCTTACCAGCACATTAAGATGCATAAGAGAATTCTGGGACACTTATCTTCTGTCTACTGTGTAGC
CTTTGATCGAAGCGGGAGGCGAATTTTTACAGGTTCAGATGACTGTTTGGTGAAAATCTGGGCAACAGAT
GATGGACGCCTCCTTGCCACACTGCGAGGGCACTCTGCTGAAATCTCCGACATGGCTGTTAATTATGAAA
ATACTCTCATTGCTGCAGGCAGCTGTGATAAAGTTGTGAGAGTATGGTGTCTTCGTACTTGTGCACCAGT
TGCTGTCCTTCAGGGACATTCAGCTTCTATTACTTCCATACAGTTTTGTCCATCAACTAAAGGCACAACT
AGATACCTCACTTCTACTGGTGCTGATGGAACAATTTGTTTCTGGCAATGGCATGTAAAAACAATGAAGT
TTAGAGATCGCCCAGTAAAATTTACTGAGAGATCCAGACCTGGAGTTCAGATATCTTGTTCATCTTTCAG
TTCTGGTGGTATGTTCATTACAACAGGGAGCACTGATCATGTAATTAGGATATACTATTTGGGTTCTGAG
ATACCTGAGAAAATTGCTGAATTAGAATCACATACGGACAAAGTTGTTGCTGTTCAGTTCTGTAACAACG
GAGACAGCTTAAGGTTTGTTAGTGGAAGTAGAGACGGAACAGCAAGAATATGGCAATATCAACAACAAGA
GTGGAAGAGCATAGTGCTAGATATGGCTACTAAAATGAGTGGGAATAATTTGACATCAGCTGAAGACAAA
GTCACTAAACTAAAGGTGACTATGGTGGCTTGGGATCGGTATGATACCACTGTTATTACTGCAGTGAACA
ATTTCCTTTTGAAAGTTTGGAATTCTGTCACAGGGCAGCTTCTTCATACTTTATCTGGGCATGATGATGA
AGTATTTGTTCTAGAAGCACATCCATTTGATCAAAGGATCATACTTTCAGCAGGTCATGATGGGAACATT
TTTATTTGGGACCTTGACCGGGGGACCAAAATACGAAATTACTTTAATATGATCGAAGGCCAAGGTCATG
GTGCAGTATTTGATTGTAAATTTTCACCAGATGGAAACCATTTTGCCTGTACAGACTCTCATGGGCATTT
GTTGCTATTTGGCTTTGGATGCAGTAAATACTATGAAAAGATTCCAGATCAGATGTTCTTCCATACCGAT
TATCGGCCCCTCATCAGAGATGCCAATAACTATGTATTAGATGAACAAACTCAACAAGCTCCTCACCTCA
TGCCTCCCCCATTCTTGGTGGATGTCGATGGAAATCCTCATCCTACAAAATTTCAACGGCTGGTACCAGG
ACGGGAAAACTGTAAAGATGAACAACTTATTCCACAGTTAGGATATGTGGCTAATGGTGACGGTGAGGTG
GTAGAACAGGTAATTGGGCAGCAAACCAATGACCAAGAAGAAAGCATTCTTGATGGAATAATCAGGGAGT
TACAGAGAGAACAAGATCTCAGATTAATTAATGAAGGAGATGTTCCACATTTTCCAATTAATAGATCATA
TTCTGTTAATGGTGCTCTGAGTAGTCCAAATATGGACATACCTTCTTCCCCAAATATTGGCCTTCGGCGT
AGTGGCCAAATTGAAGGTGTTCGGCAGATGCACAACAATGCTCCCCGGAGCCAGATGGCCACTGAAAGAG
ATCTCATGGCCTGGAGCCGAAGAGTGGTGGTGAATGAGCTAAATAGTGGCGTTAGTAGGGTACAAGAAGA
ATGTCGAAATGCAAAAGGTGACCTAGAAGTTAGTCTTTATACTGTTGAAAAGAAGAAAAAGCCATCTTAT
CCTATCCAAAGAAATGATTATCAGCCCAGCTGTGGAAGGTCTTTACGAAGGACACAACGCAAGCGACAGC
ATACTTACCTAACAAGGTCGAACATAGAGCATAATTCACAGGCATCATCTCAAACTTCCGGTGTACAAGA
AGATTCAGACAGCTCTTCAGAGGAAGATGAAACTGTTGGCACAAGTGATGCTTCCGTAGAAGACCCTGTT
GTTGAGTGGCAAAGTGAGAGTTCTTCCAGCGATTCATCAAGTGAATATTCTGACTGGATAGCAGATGCTG
GGATAAATTTGCAGCCTCCCAAAAGACAAACAAGACAGGCAACACAGAAAATATACAGCAGTTCTGAAGA
TGAAAATTTGAAATTAGAAGATAGGCAGAAGAAACCTAAACAGACTAAAAAGAAGAAAGGGGGACTTGTT
TCTATGGCAGGCGAACCCAATGAAGAATGGCTTGCCCCTCAGTGGATCTTGGATACCATACCACGACGTT
CTCCTTTTGTTCCACAGATGGGAGATGAGCTTATTTACTTTCGACAAGGACATGAAGCTTATGTGCGAGC
TGTAAGGAAATCAAAAATCTATAGTGTTAATTTACAAAAACAGCCATGGAACAAAATGGATCTCAGGGAG
CAAGAATTTGTGAAGATTGTAGGAATCAAATATGAGATTGGACCACCTACGCTATGCTGCTTGAAACTTG
CATTTTTGGATCCAATTTCAGGCAAAATGACTGGAGAGTCTTTTTCCATTAAGTATCATGACATGCCAGA
TGTCATTGATTTCCTTGTGTTACATCAGTTTTATAATGAAGCCAAAGAAAGAAACTGGCAGATTGGTGAT
AGATTCCGCAGTATAATAGATGATGCCTGGTGGTTTGGGACTGTGGAAAGTCAGCAGCCTTTTCAGCCAG
AATATCCTGATAGCTCCTTCCAGTGTTACAGTGTTCACTGGGACAATAATGAAAGAGAAAAAATGAGCCC
CTGGGATATGGAGCCGATTCCAGATGGAACTGCTTTTCCAGATGAAGTTGGTGCTGGTATTCCTGTGTCC
CAGGAAGAACTAACTGCATTGCTCTACAAACCCCAGGAAGGAGAGTGGGGTGCTCATTCCAGAGATGAGG
AGTGTGAACGAGTTATTCAGGGCATCAACAACCTTCTTTCCCTGGATTTTGCCAGCCCTTTTGCTGTTCC
AGTGGATCTCAGTGCCTACCCCTTGTATTGTACTGTAGTTGCTTATCCAACTGACCTCAATACCATCAAA
CAAAGACTTGAAAATCGCTTTTACAGGAGAATATCAGCATTAATGTGGGAGGTACGCTATATTGAACACA
ATGCTAGGACTTTCAATGAGCCAGATAGTCCCATAGTTAAAGCAGCCAAGATTGTGACTGATGTCCTACT
TCGGTTTATTGGGGATCAAAGCTGTTCTGATATTTTGGATACTTACAATAAAATCAAAGCAGAAGATCCA
GACAGCAGCGATCTGGAGGAGGATTCAGAAATGGTTGACTTAGATTCAGATGGTCCTGGCACTTCATCTG
GAAGGAGGGCTAAATGTCGAGGCAGACGACAGTCTCTCAAGTGTAATCCTGATGCTTGGAAAAAGCAATG
CGAAGAGCTACTGAGCCTCATTTATGAACGGGAAGACTCAGAGCCATTTCGTCAGCCAGCAGATCCTCAA
TCTTACCCAGTTCAACAGCAACAAGAAGGGGAATCCTCACAATCAGTTCCTCCAGATAGGCAAGACCCAT
CTCTTTCTGAGGATTATCAAGATGGTATAGACACACCTATGGACTTCAGCACTGTGAAAGAAACTTTGGA
ATCAGGAAATTATGATAGTCCTCTGGAATTTTATAAAGATGTTCGCCAAATATTCAGCAACTCCAAAGCT
TATACTTCTAATAAAAAGTCAAGGATCTATAGCATGACGCTGAGATTGTCAGCCTTATTTGAAAATCACA
TTAAAAACATCATCTCTGACTATAAGTCAGCAATCCAGAGTCAGAAGAGGAGAAGACCACGGTACAGAAA
GCGTCTGAGAAGCAGCAGCAGCTCGTTATCTAGCAGCAGAGCTCCCAGTCCAAAAGGCAAACAGAAGCAA
ATGAAGTTACAGCCTAAAAATGACCAGAATACCTCAGTGGCTTATGCCAGGACTAGCTCTCCTTTTTCTT
CTCCTGTTTCAGATGCTGCTGAAGGTGTTTCACTGTATCTACTTGATGATGAAGGGGATGGGCCTTTTTC
TCCATCAAGTTTCAGTGGATATAGTAGAAGTGGAAATAGCCATGACCCAGGGAAAGCCAAATCATTTCGT
AATAGAGTTTTACCAGCTAAACAAGATCACTCCCTTGATGGACCTCTTACAAATGTTGATGGCAGAGAGC
CCCGGACAGGAGCCAAAAGAAAACTGCTCAGTGCTTCAGAAGAAGATGAAAGCATGGGAGGAGAAGAGAA
AGAAATGAAAGAAACAAAGGAGCAAGTACATTTATCCTCCTCTGAGAGTGGAGAGTTAGGCTCCAGTTTA
AGTTCAGAAAGTACCTCTGGCTCTGACTCTGACTCTGAATCCACTTCCAGAACCGATCAAGATTATGTTG
ATGGAGACCATGACTATAGCAAATTCATACAAACCAGACCTAAAAGGAAACTCAGAAAACAACACACCAA
TGGAAAAAGAAACTGGAAGACGAGAGGCACAGGAGGAAGAGGCAGATGGGGAAGATGGGGAAGATGGAGC
AGAGGAGGCAGAGGAAGAGGTGGCAGGGGTCGAGGGGGTCGAGGGCGAGGTGGAGGTGGGGGGAGAGGGA
GAGGACGAGGGAGAGGAGGAAGAGGTGCCTCTAGAGGATCAAGCCGAGCCAAACGAGCCCGAGTTGCAGA
TGATGAATTTGATACGATGTTTTCAGGACGTTTCAGTCGACTTCCACGGATTAAAACAAGAAACCAAGGC
AGGAGAACTGTTTTATATAATGATGATTCAGATAATGACAACTTTGTGTCCACTGAGGATCCTCTGAATC
TTGGTACATCCAGATCAGGCAGAGTACGTAAAATGACCGAAAAAGCCAGGGTTAGCCATCTCATGGGATG
GAATTATTAA

Translation (1799 aa):
MAAAPTQIEAELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLDWEGKEHRRSFEDLVAANAHIPPD
YLLKICERIGPLLDKEIPQSVPGVQTLLGVGRQSLLRDAKDCKSTLWNGSAFAALHRGRPPELPVNYVKP
PNVVNITSARQLTGCSRFSHVFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATD
DGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTT
RYLTSTGADGTICFWQWHVKTMKFRDRPVKFTERSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSE
IPEKIAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQYQQQEWKSIVLDMATKMSGNNLTSAEDK
VTKLKVTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNI
FIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTD
YRPLIRDANNYVLDEQTQQAPHLMPPPFLVDVDGNPHPTKFQRLVPGRENCKDEQLIPQLGYVANGDGEV
VEQVIGQQTNDQEESILDGIIRELQREQDLRLINEGDVPHFPINRSYSVNGALSSPNMDIPSSPNIGLRR
SGQIEGVRQMHNNAPRSQMATERDLMAWSRRVVVNELNSGVSRVQEECRNAKGDLEVSLYTVEKKKKPSY
PIQRNDYQPSCGRSLRRTQRKRQHTYLTRSNIEHNSQASSQTSGVQEDSDSSSEEDETVGTSDASVEDPV
VEWQSESSSSDSSSEYSDWIADAGINLQPPKRQTRQATQKIYSSSEDENLKLEDRQKKPKQTKKKKGGLV
SMAGEPNEEWLAPQWILDTIPRRSPFVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWNKMDLRE
QEFVKIVGIKYEIGPPTLCCLKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGD
RFRSIIDDAWWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPDGTAFPDEVGAGIPVS
QEELTALLYKPQEGEWGAHSRDEECERVIQGINNLLSLDFASPFAVPVDLSAYPLYCTVVAYPTDLNTIK
QRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVTDVLLRFIGDQSCSDILDTYNKIKAEDP
DSSDLEEDSEMVDLDSDGPGTSSGRRAKCRGRRQSLKCNPDAWKKQCEELLSLIYEREDSEPFRQPADPQ
SYPVQQQQEGESSQSVPPDRQDPSLSEDYQDGIDTPMDFSTVKETLESGNYDSPLEFYKDVRQIFSNSKA
YTSNKKSRIYSMTLRLSALFENHIKNIISDYKSAIQSQKRRRPRYRKRLRSSSSSLSSSRAPSPKGKQKQ
MKLQPKNDQNTSVAYARTSSPFSSPVSDAAEGVSLYLLDDEGDGPFSPSSFSGYSRSGNSHDPGKAKSFR
NRVLPAKQDHSLDGPLTNVDGREPRTGAKRKLLSASEEDESMGGEEKEMKETKEQVHLSSSESGELGSSL
SSESTSGSDSDSESTSRTDQDYVDGDHDYSKFIQTRPKRKLRKQHTNGKRNWKTRGTGGRGRWGRWGRWS
RGGRGRGGRGRGGRGRGGGGGRGRGRGRGGRGASRGSSRAKRARVADDEFDTMFSGRFSRLPRIKTRNQG
RRTVLYNDDSDNDNFVSTEDPLNLGTSRSGRVRKMTEKARVSHLMGWNY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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