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Report for CCDS31817.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31817.1 Public Homo sapiens 12 OR6C6 24 110 108 CCDS HistoryNCBI Gene:283365Re-query CCDS DB by CCDS ID:31817.1Re-query CCDS DB by GeneID:283365See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31817.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358433.3 ENSP00000351211.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358433.3Link to Ensembl Protein Viewer:ENSP00000351211.2Re-query CCDS DB by Nucleotide ID:ENST00000358433Re-query CCDS DB by Protein ID:ENSP00000351211
Original member Current member NCBI NM_001005493.2 NP_001005493.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005493.2Link to Protein Sequence:NP_001005493.1Re-query CCDS DB by Nucleotide ID:NM_001005493Re-query CCDS DB by Protein ID:NP_001005493Link to BLAST:NP_001005493.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005493.1 314 A6NF89 314 100% 0 0

Chromosomal Locations for CCDS 31817.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 55294288 55295232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGAAGAACAAATCAATGGAAATAGAGTTCATTCTCCTAGGATTGACAGATGACCCACAGTTGCAAATTG
TGATTTTCCTGTTTCTATTTCTCAACTACACCTTGAGCCTGATGGGGAACTTAATCATCATCATCCTCAC
CCTGCTGGATCCCCGGCTCAAGACGCCAATGTATTTCTTTCTCCGTAATTTCTCCTTTTTGGAAGTAATA
TTCACAACAGTGTGTATTCCTAGATTCTTGATAACCATTGTGACTAGAGACAAAACCATTTCTTATAATA
ATTGTGCAACTCAATTATTTTTTATCCTTTTACCGGGAGTTACTGAGTTTTACCTCCTGGCTGCCATGTC
CTATGACCGCTACGTTGCCATCTGCAAACCACTGCATTATCCAATCATTATGAGCAGCAAAGTCTGCTAC
CAACTTGTACTTAGCTCTTGGGTAACTGGATTCTTAATCATATTTCCCCCATTGGTCATGGGACTCAAGC
TGGATTTTTGTGCTTCCAAAACTATTGACCACTTTATGTGTGAAACTTCTCCTATTCTGCAGATCTCCTG
CACAGATACCCATGTCCTAGAATTGATGTCTTTTACCTTAGCTGTGGTGACACTTGTGGTCACACTGGTA
TTAGTGATTCTCTCTTACACTTGCATTATTAAGACCATTCTGAAATTCTCTTCTGCACAGCAAAGGAACA
AAGCATTTTCCACCTGTACTTCCCACATGATTGTTGTCTCCATGACATACGGTAGCTGTATCTTTATGTA
TATTAAACCATCTGCAAAAGAAAGAGTGACTGTATCCAAAGGTGTAGCTTTGCTCTATACCTCAATTGCC
CCTTTACTAAATCCCTTCATTTATACTCTCAGAAACCAGCAGGTGAAAGAAGTCTTCTGGGATGTATTAC
AAAAGAATTTGTGTTTTTCTAAAAGACCATTTTAA

Translation (314 aa):
MKNKSMEIEFILLGLTDDPQLQIVIFLFLFLNYTLSLMGNLIIIILTLLDPRLKTPMYFFLRNFSFLEVI
FTTVCIPRFLITIVTRDKTISYNNCATQLFFILLPGVTEFYLLAAMSYDRYVAICKPLHYPIIMSSKVCY
QLVLSSWVTGFLIIFPPLVMGLKLDFCASKTIDHFMCETSPILQISCTDTHVLELMSFTLAVVTLVVTLV
LVILSYTCIIKTILKFSSAQQRNKAFSTCTSHMIVVSMTYGSCIFMYIKPSAKERVTVSKGVALLYTSIA
PLLNPFIYTLRNQQVKEVFWDVLQKNLCFSKRPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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