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Report for CCDS22459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22459.1 Public Mus musculus 8 Pkn1 23 108 98 CCDS HistoryNCBI Gene:320795Re-query CCDS DB by CCDS ID:22459.1Re-query CCDS DB by GeneID:320795See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22459.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000005616.15 ENSMUSP00000005616.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000005616.15Link to Ensembl Protein Viewer:ENSMUSP00000005616.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000005616Re-query CCDS DB by Protein ID:ENSMUSP00000005616
Original member Current member NCBI NM_177262.4 NP_796236.2 Accepted alive Link to Nucleotide Sequence:NM_177262.4Link to Protein Sequence:NP_796236.2Re-query CCDS DB by Nucleotide ID:NM_177262Re-query CCDS DB by Protein ID:NP_796236Link to BLAST:NP_796236.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_796236.2 946 P70268-1 946 100% 0 0

Chromosomal Locations for CCDS 22459.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 83670165 83670368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83670739 83670819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83670922 83671029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83671299 83671441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83671717 83671793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83671907 83671969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83672156 83672332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83673302 83673393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83673481 83673556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83673631 83673710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83677524 83677617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83677706 83677847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83677931 83678006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83680954 83681097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83681180 83681289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83683399 83683593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83684003 83684216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83684636 83684781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83687040 83687184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83691049 83691200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83692636 83692936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 83698967 83698987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2841 nt):
ATGGCCGGCGACGCCGTACAGAGTGAGCCTCGAAGCTGGTCGCTGCTGGAACAGCTGGGTCTGGCTGGGG
CTGACCTGGCAGCCCCCGGGGTGCAGCAACAGCTGGAGTTAGAGCGAGAGCGACTGAAGCGGGAGATACG
GAAGGAGCTGAAGCTGAAGGAGGGCGCTGAGAACCTGAGGCGAGCCACCACTGACCTGGGCCGTAGCCTG
GCCCCTGTGGAGCTGCTGCTGCGGGGCTCCGCTCGACGCCTAGACTTACTGCACCAGCAGCTGCAGGAGC
TGCATGCACATGTGGTGCTGCCTGACCCTGCAGCTGGAAGCGATGCTACCCAATCCCTTGCAGAGGGCAG
CCCTATCTGCTCATCCACCAACCTGAGCAGAGTGGCTGGGCTGGAGAAGCAGCTGGCCATTGAGCTCAAG
GTCAAACAGGGGGCAGAGAACATGATCCAGACCTATAGCAATGGCAGCAGCAAGGACCGGAAGCTGTTGT
TGACAGCCCAGCAGATGCTGCAGGACAGTAAGACCAAGATTGACATCATCCGCATGCAGCTTCGAAGAGC
GCTCCAGGCACTACAGGCTGGAGAGCTGGAGAGTCAGGCAGCTCCTGATGAAGCCCAAGGAGATCCAGAA
CTGGGAGCCGTAGAGCTACGCATTGAGGAGCTACGACACCATTTTCGAGTGGAGCATGCAGTGGCAGAAG
GTGCCAAGAATGTCCTGCGCCTGCTCAGTGGGGCAAAGGCCCCAGACCGCAAGGCAGTCAGCGAGGCTCA
GGAGAAATTGACTGAGTCCAACCAGAAGCTGGGCTTGCTGCGGGAATCACTGGAGAGGCGCCTTGGGGAG
TTGCCTGCCGATCACCCCAAGGGGCGGCTGCTTCGGGAGGAGCTCACTGCAGCCTCGTCCTCAGCCTTCA
GCGCCATACTGCCTGGGCCCTTCCCTGCCACTCACTACAGCACCTTGAGCAAGCCTGCACCGCTCACAGG
GACCCTGGAAGTACGAGTGGTGGGCTGCAAAAACCTTCCCGAGACCATCCCCTGGAGCCCTCCCCCCTCA
GTGGGGGCATCTGGGACCCCCGAAAGCCGCACTCCGTTCCTGAGTCGCCCCGCTCGGGGCCTTTACAGCC
GGAGTGGAAGCCTTAGTGGACGGAGCAGCCTCAGAGGGGAGGCAGAGAATGCCACTGAGGTCAGCACCGT
GCTCAAGCTGGACAACACAGTGGTGGGGCAAACAGCCTGGAAGCCATGCGGCCCCAATGCCTGGGACCAG
AGCTTTACCCTGGAGCTGGAGAGGGCTCGGGAGCTGGAGCTGGCTGTGTTCTGGCGAGACCAGAGGGGTC
TGTGTGCTCTCAAATTTCTGAAGTTGGAGGACTTCTTGGACAACGAGAGGCATGAGGTGCAGCTGGACAT
GGAACCCCAGGGCTGCCTGGTGGCTGAGGTCACTTTCCGAAACCCCATCATCGAGCGGATCCCTAGGCTC
CAAAGGCAGAAAAAAATCTTCTCCAAGCAGCAAGGGAAGGCATTTCAGCGAGCCAGACAGATGAACATAG
ATGTGGCGACTTGGGTGCGGCTGCTCCGTAGACTCATCCCTAGTGCTGTGGCCACTGGCACCTTCAGTCC
CAATGCATCTCCAGGTGCTGAGATCCGGCACACTGGAGACATATCCATGGAGAAATTGAATCTCGGTGCT
GACTCAGACAGCTCGTCCCAAAAGAGCCCACCAGGGCTGCCCTCCACCTCATGCAGCCTGAGTTCTCCAA
CCCATGAATCCACCACATCTCCAGAGCTGCCTTCAGAGACCCAGGAGACTCCAGGCCCTGGCCTGTGCAG
CCCCTTGAGAAAGTCGCCCCTGACACTTGAGGACTTCAAGTTCCTGGCCGTGCTTGGCCGGGGTCACTTT
GGAAAGGTGCTGCTGTCTGAATTCCGCTCCAGTGGGGAGCTCTTTGCCATCAAAGCCTTGAAGAAAGGTG
ACATTGTAGCCCGAGATGAGGTTGAGAGCCTGATGTGTGAGAAGCGGATTTTGGCGGCCGTGACCAGGGC
AGGACATCCCTTCCTGGTGAACCTTTTCGGCTGTTTCCAGACCCCAGAGCACGTGTGCTTTGTGATGGAG
TACTCGGCGGGTGGAGACCTGATGCTGCACATTCATAGCGACGTGTTCTCAGAGCCTCGGGCTGTCTTCT
ATTCGGCCTGTGTGGTGCTGGGACTGCAGTTCCTCCATGAACACAAGATTGTCTACAGGGACCTGAAGTT
GGACAATTTGCTCCTGGATACTGAGGGCTACGTCAAGATCGCAGACTTTGGCCTCTGCAAGGAGGGGATG
GGCTATGGGGACCGGACCAGCACGTTCTGCGGAACTCCGGAGTTCCTGGCGCCGGAAGTGCTCACAGACA
CATCCTACACGCGAGCAGTGGACTGGTGGGGACTGGGCGTGCTGCTCTATGAGATGTTGGTTGGAGAGTC
TCCGTTCCCTGGGGATGATGAGGAGGAGGTATTTGACAGCATTGTCAACGACGAAGTTCGCTATCCCCGC
TTCCTGTCTGCAGAGGCCATCGGCATCATGAGAAGGCTACTGCGGAGGAACCCGGAGCGGAGGCTGGGGT
CCACTGAGCGCGATGCAGAAGATGTGAAAAAACAGCCTTTCTTCCGGTCTCTGGGCTGGGATGTCCTGCT
GGCCCGCCGCTTGCCTCCACCCTTCGTGCCTACACTTTCAGGGCGCACAGATGTCAGCAACTTCGATGAG
GAGTTCACTGGGGAGGCCCCCACACTGAGTCCTCCCCGGGATGCACGGCCCCTCACAGCTGCGGAGCAGG
CAGCCTTCCGGGATTTCGACTTTGTGGCCGGAGGCTACTAG

Translation (946 aa):
MAGDAVQSEPRSWSLLEQLGLAGADLAAPGVQQQLELERERLKREIRKELKLKEGAENLRRATTDLGRSL
APVELLLRGSARRLDLLHQQLQELHAHVVLPDPAAGSDATQSLAEGSPICSSTNLSRVAGLEKQLAIELK
VKQGAENMIQTYSNGSSKDRKLLLTAQQMLQDSKTKIDIIRMQLRRALQALQAGELESQAAPDEAQGDPE
LGAVELRIEELRHHFRVEHAVAEGAKNVLRLLSGAKAPDRKAVSEAQEKLTESNQKLGLLRESLERRLGE
LPADHPKGRLLREELTAASSSAFSAILPGPFPATHYSTLSKPAPLTGTLEVRVVGCKNLPETIPWSPPPS
VGASGTPESRTPFLSRPARGLYSRSGSLSGRSSLRGEAENATEVSTVLKLDNTVVGQTAWKPCGPNAWDQ
SFTLELERARELELAVFWRDQRGLCALKFLKLEDFLDNERHEVQLDMEPQGCLVAEVTFRNPIIERIPRL
QRQKKIFSKQQGKAFQRARQMNIDVATWVRLLRRLIPSAVATGTFSPNASPGAEIRHTGDISMEKLNLGA
DSDSSSQKSPPGLPSTSCSLSSPTHESTTSPELPSETQETPGPGLCSPLRKSPLTLEDFKFLAVLGRGHF
GKVLLSEFRSSGELFAIKALKKGDIVARDEVESLMCEKRILAAVTRAGHPFLVNLFGCFQTPEHVCFVME
YSAGGDLMLHIHSDVFSEPRAVFYSACVVLGLQFLHEHKIVYRDLKLDNLLLDTEGYVKIADFGLCKEGM
GYGDRTSTFCGTPEFLAPEVLTDTSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR
FLSAEAIGIMRRLLRRNPERRLGSTERDAEDVKKQPFFRSLGWDVLLARRLPPPFVPTLSGRTDVSNFDE
EFTGEAPTLSPPRDARPLTAAEQAAFRDFDFVAGGY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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