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Report for CCDS21981.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21981.1 Public Mus musculus 7 Or13a18 23 108 98 CCDS HistoryNCBI Gene:18345Re-query CCDS DB by CCDS ID:21981.1Re-query CCDS DB by GeneID:18345See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21981.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000072655.2 ENSMUSP00000072445.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000072655.2Link to Ensembl Protein Viewer:ENSMUSP00000072445.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000072655Re-query CCDS DB by Protein ID:ENSMUSP00000072445
Original member Current member NCBI NM_146934.2 NP_667145.1 Accepted alive Link to Nucleotide Sequence:NM_146934.2Link to Protein Sequence:NP_667145.1Re-query CCDS DB by Nucleotide ID:NM_146934Re-query CCDS DB by Protein ID:NP_667145Link to BLAST:NP_667145.1

Chromosomal Locations for CCDS 21981.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140610168 140611124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGAACTGGATACTCCACTCAACAATGGTCAGTCCCAACCAGACAGTAGTGACAGAGTTTGTGCTGCAAG
GGTTCTCAGAGCACCCAAGTCTAAGACTGTTCCTGATGGGCTGTTTCCTGTCCCTGTACACAGTGGCTTT
AATGGGCAACATGGTGATCATTGCTTTGATCACCTCAAGCACTGGGCTCCACAGTCCCATGTACTTTTTC
CTGTGCAACTTAGCGACCATGGATATTATCTGCACCTCCTCTGTACTGCCCAAGGCGCTGGTTGGTCTAC
TGTCTGAGGAAAACACCATCTCCTTCAAAGGGTGCATGACTCAGCTCTTCTTTCTTGTGTGGTCTGGATC
CTCTGAGCTGCTGCTGCTCACAGTCATGGCCTATGACCGCTATGTGGCCATCTGTTTGCCCCTGCATTAC
AGCTCTAGGATGAGTCCACAGCTCTGTGGGACCTTTGCCGTGGGTGTATGGTCCATCTGCGCACTAAATG
CATCTATCAACACTGGTCTGATGACACGGCTGTCATTCTGTGGCCCCAAGGTCATCACCCACTTCTTCTG
TGAGATTCCCCCACTCCTCCTGCTCTCCTGTAGTCCTACATATATAAATAGCGTTATGACTCTTGTGGCA
GATGCCTTTTATGGAGGCATCAATTTTTTACTTACCTTGCTATCCTATGGCTGCATCATTGCCAGCATCC
TGCGCATGCGTTCTGCTGAGGGCAAGAGGAAGGCCTTTTCTACCTGCTCATCCCACCTCATCGTGGTCTC
TGTGTACTACTCATCTGTGTTCTGTGCCTATATCAGTCCTGGTTCCAGCTACAGCCCAGAAAGAAGCAAA
TTTACCTCGGTTTTGTACTCAGTCCTCAGCCCAACCCTCAACCCCCTCATCTATACACTGAGGAACAAGG
ATGTCAAGCTTGCCCTGAGAAGACTCTTCCCCTCTTTCTCAAATTAA

Translation (318 aa):
MNWILHSTMVSPNQTVVTEFVLQGFSEHPSLRLFLMGCFLSLYTVALMGNMVIIALITSSTGLHSPMYFF
LCNLATMDIICTSSVLPKALVGLLSEENTISFKGCMTQLFFLVWSGSSELLLLTVMAYDRYVAICLPLHY
SSRMSPQLCGTFAVGVWSICALNASINTGLMTRLSFCGPKVITHFFCEIPPLLLLSCSPTYINSVMTLVA
DAFYGGINFLLTLLSYGCIIASILRMRSAEGKRKAFSTCSSHLIVVSVYYSSVFCAYISPGSSYSPERSK
FTSVLYSVLSPTLNPLIYTLRNKDVKLALRRLFPSFSN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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