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Report for CCDS30413.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30413.1 Public Mus musculus X Bex2 23 108 98 CCDS HistoryNCBI Gene:12069Re-query CCDS DB by CCDS ID:30413.1Re-query CCDS DB by GeneID:12069See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30413.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049130.7 ENSMUSP00000043113.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049130.7Link to Ensembl Protein Viewer:ENSMUSP00000043113.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000049130Re-query CCDS DB by Protein ID:ENSMUSP00000043113
Original member Current member NCBI NM_009749.2 NP_033879.1 Accepted alive Link to Nucleotide Sequence:NM_009749.2Link to Protein Sequence:NP_033879.1Re-query CCDS DB by Nucleotide ID:NM_009749Re-query CCDS DB by Protein ID:NP_033879Link to BLAST:NP_033879.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033879.1 129 Q9WTZ8 129 100% 0 0

Chromosomal Locations for CCDS 30413.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 136066813 136067202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (390 nt):
ATGGAGTCCAAAGTGGAACAAGGCGTGAAAAATCTCAACATGGAGAATGACCATCAGGAAAAGGAGGAAA
AGGAAGAAAAGCCACAGGATGCTAGCAAAAGGGATCCGATTGTGGCCCTGCCTTTCGAAGCTGGAGACTA
CTACGTGCCTAGAGGAGGTCGCAGGCGGTTCCGGGTTCGGCAGCCCATCGTGCACTACAGATGGGACCTG
ATGCATAGGGTTGGGGAGCCCCAGGGAAGGATGAGAGAGGAGAACGTACAGAGGTTTGGGGATGATGTGA
GACAGCTCATGGAGAAGCTGAGGGAAAGGCAGCTGAGCCACAGCCTGCGGGCGGTTAGCACTGACCCGCC
TCATCATGACCACCATGATGAGTTTTGCCTTATGCCCTGA

Translation (129 aa):
MESKVEQGVKNLNMENDHQEKEEKEEKPQDASKRDPIVALPFEAGDYYVPRGGRRRFRVRQPIVHYRWDL
MHRVGEPQGRMREENVQRFGDDVRQLMEKLRERQLSHSLRAVSTDPPHHDHHDEFCLMP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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