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Report for CCDS23502.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23502.1 Public Mus musculus 9 Gnai2 23 108 98 CCDS HistoryNCBI Gene:14678Re-query CCDS DB by CCDS ID:23502.1Re-query CCDS DB by GeneID:14678See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23502.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000055704.11 ENSMUSP00000057543.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000055704.11Link to Ensembl Protein Viewer:ENSMUSP00000057543.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000055704Re-query CCDS DB by Protein ID:ENSMUSP00000057543
Original member Current member EBI ENSMUST00000192615.5 ENSMUSP00000142326.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000192615.5Link to Ensembl Protein Viewer:ENSMUSP00000142326.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000192615Re-query CCDS DB by Protein ID:ENSMUSP00000142326
Original member Current member NCBI NM_008138.5 NP_032164.2 Accepted alive Link to Nucleotide Sequence:NM_008138.5Link to Protein Sequence:NP_032164.2Re-query CCDS DB by Nucleotide ID:NM_008138Re-query CCDS DB by Protein ID:NP_032164Link to BLAST:NP_032164.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032164.2 355 P08752 355 100% 0 0

Chromosomal Locations for CCDS 23502.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 107615635 107615825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107616155 107616308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107616414 107616543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107616935 107617063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107619697 107619857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107620047 107620188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107620420 107620462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 107635100 107635217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1068 nt):
ATGGGCTGCACCGTGAGCGCCGAGGACAAGGCGGCAGCCGAGCGCTCTAAAATGATCGACAAGAACCTGC
GGGAGGACGGCGAGAAGGCGGCGCGGGAGGTGAAGTTGCTTCTGTTAGGTGCTGGAGAGTCAGGGAAGAG
CACCATCGTCAAGCAGATGAAGATCATCCATGAAGATGGCTACTCAGAAGAGGAGTGCCGGCAGTACCGT
GCCGTGGTCTACAGCAACACCATCCAGTCTATCATGGCCATCGTGAAGGCCATGGGCAACCTGCAGATCG
ACTTTGCTGATCCCCAGCGTGCGGATGATGCCAGGCAGCTGTTCGCCCTGTCCTGTGCTGCAGAGGAACA
AGGGATGCTTCCTGAAGACCTGTCCGGTGTCATCCGGAGGCTCTGGGCTGACCACGGTGTGCAAGCCTGC
TTTGGCCGCTCACGAGAATACCAGCTCAATGACTCAGCCGCTTACTACCTGAATGATCTGGAGCGCATTG
CACAGAGTGACTACATCCCTACACAGCAGGATGTGCTGCGGACCCGTGTGAAGACCACGGGCATCGTGGA
AACACACTTCACCTTCAAGGACTTACACTTCAAGATGTTTGATGTGGGTGGTCAGCGGTCTGAGCGCAAG
AAGTGGATCCACTGCTTTGAGGGCGTCACGGCCATCATCTTCTGTGTCGCCTTGAGCGCTTATGACTTGG
TGCTGGCTGAGGATGAGGAGATGAACCGCATGCATGAGAGCATGAAGCTGTTTGACAGCATCTGCAACAA
CAAGTGGTTCACAGACACCTCCATCATCCTCTTCCTCAACAAGAAGGACCTGTTTGAAGAAAAGATCACA
CAGAGCTCCCTGACCATCTGTTTCCCTGAGTACACGGGGGCCAACAAGTACGACGAGGCAGCCAGCTACA
TCCAGAGCAAGTTTGAGGATCTAAATAAGCGCAAAGACACCAAGGAGATCTACACGCACTTCACGTGCGC
CACCGACACCAAGAACGTGCAGTTTGTGTTCGATGCCGTCACTGACGTCATCATCAAGAACAACCTGAAG
GACTGTGGCCTCTTCTGA

Translation (355 aa):
MGCTVSAEDKAAAERSKMIDKNLREDGEKAAREVKLLLLGAGESGKSTIVKQMKIIHEDGYSEEECRQYR
AVVYSNTIQSIMAIVKAMGNLQIDFADPQRADDARQLFALSCAAEEQGMLPEDLSGVIRRLWADHGVQAC
FGRSREYQLNDSAAYYLNDLERIAQSDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERK
KWIHCFEGVTAIIFCVALSAYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIT
QSSLTICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNNLK
DCGLF


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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