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Report for CCDS57659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57659.1 Public Mus musculus 9 Dnm2 23 108 98 CCDS HistoryNCBI Gene:13430Re-query CCDS DB by CCDS ID:57659.1Re-query CCDS DB by GeneID:13430See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57659.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091087.12 ENSMUSP00000088616.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091087.12Link to Ensembl Protein Viewer:ENSMUSP00000088616.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000091087Re-query CCDS DB by Protein ID:ENSMUSP00000088616
Original member Current member NCBI NM_007871.2 NP_031897.2 Accepted alive Link to Nucleotide Sequence:NM_007871.2Link to Protein Sequence:NP_031897.2Re-query CCDS DB by Nucleotide ID:NM_007871Re-query CCDS DB by Protein ID:NP_031897Link to BLAST:NP_031897.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031897.2 866 P39054-2 866 100% 0 0

Chromosomal Locations for CCDS 57659.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 21425096 21425256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21457503 21457576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21465582 21465731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21467532 21467735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21471343 21471441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21472613 21472773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21474532 21474674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21476473 21476608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21478281 21478348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21478899 21479037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21481333 21481419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21485651 21485721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21489743 21489794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21494504 21494617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21499258 21499367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21500258 21500369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21503542 21503706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21504430 21504662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21505464 21505715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21506333 21506402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2601 nt):
ATGGGCAACCGCGGGATGGAAGAGCTCATCCCGCTGGTTAACAAGCTGCAGGACGCCTTCAGCTCCATCG
GTCAGAGCTGCCACCTGGACCTGCCGCAGATCGCCGTGGTGGGCGGCCAGAGCGCCGGCAAAAGTTCGGT
GCTCGAGAACTTCGTGGGCCGGGACTTCCTTCCACGAGGATCAGGAATTGTCACCCGGAGGCCTCTCATT
CTGCAGCTCATCTTTTCCAAAACAGAATATGCGGAATTTTTGCACTGCAAGTCCAAAAAATTTACAGACT
TTGATGAAGTCCGGCAGGAGATCGAAGCAGAGACTGACCGGGTCACAGGCACCAACAAAGGCATCTCCCC
TGTGCCCATCAACCTTCGGGTCTACTCACCACACGTGTTGAACTTGACCCTCATCGACCTCCCAGGCATC
ACTAAGGTGCCGGTGGGGGACCAGCCGCCAGACATCGAGTACCAGATCAAGGACATGATCCTGCAGTTCA
TCAGCCGCGAGAGCAGCCTCATTCTTGCCGTCACACCTGCCAACATGGACTTGGCCAACTCAGACGCCCT
CAAGCTGGCCAAGGAGGTGGACCCCCAAGGCCTACGGACCATCGGTGTCATCACCAAGCTAGACTTGATG
GATGAAGGCACAGACGCCAGGGATGTCCTGGAAAACAAGCTACTGCCCTTGAGAAGAGGCTATATCGGCG
TGGTTAACCGAAGCCAGAAAGACATCGAGGGCAAAAAGGACATCCGGGCTGCTCTGGCAGCCGAGAGGAA
ATTCTTCCTCTCCCACCCAGCCTACCGGCACATGGCTGACCGCATGGGCACCCCACACTTGCAGAAAACC
CTGAACCAGCAACTGACCAACCACATCCGAGAGTCACTGCCGACCCTTCGCAGCAAGCTGCAGAGCCAAC
TGCTGTCCCTGGAGAAGGAAGTGGAAGAGTACAAGAATTTCCGGCCTGATGACCCCACGCGCAAGACCAA
AGCCCTGCTGCAGATGGTTCAGCAGTTTGGAGTGGACTTTGAGAAGCGAATTGAAGGCTCGGGAGATCAA
GTAGACACACTAGAGTTGTCTGGTGGAGCCCGCATCAATCGTATCTTTCATGAGCGCTTTCCCTTTGAAC
TGGTAAAGATGGAGTTTGATGAGAAAGATCTACGAAGAGAGATCAGCTATGCTATTAAGAACATCCACGG
AGTCAGAACTGGGCTCTTCACGCCGGATTTGGCGTTCGAGGCCATTGTGAAAAAGCAGGTGGTCAAGCTG
AAAGAGCCCTGTCTGAAATGCGTGGACCTGGTTATCCAGGAGCTAATCAGTACAGTTAGGCAGTGCACCA
GCAAGCTGAGTTCCTACCCCCGGCTGCGAGAGGAGACCGAGCGAATTGTCACCACCTACATCAGGGAGCG
AGAAGGGAGAACCAAGGACCAGATTCTTCTTCTGATTGACATTGAGCAGTCGTACATCAACACAAACCAT
GAAGACTTCATTGGATTTGCCAATGCCCAGCAGAGGAGCACGCAGCTGAACAAGAAGAGGGCCATACCCA
ATCAGGTGATCCGCAGGGGCTGGTTGACCATCAACAATATCAGCTTGATGAAGGGTGGCTCCAAGGAGTA
CTGGTTCGTGCTGACAGCTGAGTCATTGTCTTGGTACAAGGATGAGGAGGAGAAAGAAAAGAAGTACATG
CTGCCACTGGACAACCTCAAGATCCGGGACGTGGAAAAGGGCTTCATGTCCAACAAGCACGTGTTTGCCA
TCTTCAACACAGAGCAGAGGAATGTCTACAAGGACCTTCGACAGATTGAACTGGCTTGTGACTCCCAGGA
AGATGTGGACAGCTGGAAGGCTTCGTTCCTGCGCGCTGGGGTCTACCCAGAGAAGGACCAGGCAGAGAAT
GAGGATGGAGCACAAGAGAACACCTTCTCCATGGACCCGCAGCTGGAGCGACAGGTGGAGACCATCCGTA
ACCTGGTGGACTCCTACGTGGCCATCATCAACAAGTCCATCCGTGACCTTATGCCAAAGACCATCATGCA
CCTCATGATCAACAACACAAAGGCCTTCATCCACCATGAGCTGCTGGCTTACCTGTATTCATCAGCAGAC
CAGAGCAGCCTCATGGAAGAGTCAGCCGAGCAGGCTCAGCGGCGGGACGACATGCTGCGCATGTACCACG
CACTGAAGGAGGCCCTCAACATTATTGGGGACATCAGCACCAGCACCGTGTCCACACCCGTGCCCCCACC
GGTCGATGACACGTGGCTCCAAAACACCAGCGGCCACAGCCCCACTCCACAGCGCCGACCTGTGTCCAGT
GTGCACCCACCAGGCCGGCCACCTGCAGTGCGGGGTCCTACACCGGGGCCTCCCCTGATTCCTATGCCTG
TGGGGGCCACATCCTCCTTCTCAGCACCTCCCATCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCCAA
CAACGACCCCTTCTCTGCGCCACCTCAGATACCATCTCGGCCAGCACGGATTCCCCCTGGTATCCCTCCA
GGAGTGCCCAGCAGAAGAGCGCCCGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGCCGTCCC
TGCTCGACTAG

Translation (866 aa):
MGNRGMEELIPLVNKLQDAFSSIGQSCHLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLI
LQLIFSKTEYAEFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGI
TKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLM
DEGTDARDVLENKLLPLRRGYIGVVNRSQKDIEGKKDIRAALAAERKFFLSHPAYRHMADRMGTPHLQKT
LNQQLTNHIRESLPTLRSKLQSQLLSLEKEVEEYKNFRPDDPTRKTKALLQMVQQFGVDFEKRIEGSGDQ
VDTLELSGGARINRIFHERFPFELVKMEFDEKDLRREISYAIKNIHGVRTGLFTPDLAFEAIVKKQVVKL
KEPCLKCVDLVIQELISTVRQCTSKLSSYPRLREETERIVTTYIREREGRTKDQILLLIDIEQSYINTNH
EDFIGFANAQQRSTQLNKKRAIPNQVIRRGWLTINNISLMKGGSKEYWFVLTAESLSWYKDEEEKEKKYM
LPLDNLKIRDVEKGFMSNKHVFAIFNTEQRNVYKDLRQIELACDSQEDVDSWKASFLRAGVYPEKDQAEN
EDGAQENTFSMDPQLERQVETIRNLVDSYVAIINKSIRDLMPKTIMHLMINNTKAFIHHELLAYLYSSAD
QSSLMEESAEQAQRRDDMLRMYHALKEALNIIGDISTSTVSTPVPPPVDDTWLQNTSGHSPTPQRRPVSS
VHPPGRPPAVRGPTPGPPLIPMPVGATSSFSAPPIPSRPGPQSVFANNDPFSAPPQIPSRPARIPPGIPP
GVPSRRAPAAPSRPTIIRPAEPSLLD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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