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Report for CCDS7378.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7378.1 Public Homo sapiens 10 BMPR1A 24 110 108 CCDS HistoryNCBI Gene:657Re-query CCDS DB by CCDS ID:7378.1Re-query CCDS DB by GeneID:657See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7378.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372037.8 ENSP00000361107.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372037.8Link to Ensembl Protein Viewer:ENSP00000361107.2Re-query CCDS DB by Nucleotide ID:ENST00000372037Re-query CCDS DB by Protein ID:ENSP00000361107
Original member Current member EBI ENST00000635816.1 ENSP00000489707.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000635816.1Link to Ensembl Protein Viewer:ENSP00000489707.1Re-query CCDS DB by Nucleotide ID:ENST00000635816Re-query CCDS DB by Protein ID:ENSP00000489707
Original member Current member EBI ENST00000636056.1 ENSP00000490273.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636056.1Link to Ensembl Protein Viewer:ENSP00000490273.1Re-query CCDS DB by Nucleotide ID:ENST00000636056Re-query CCDS DB by Protein ID:ENSP00000490273
Original member Current member EBI ENST00000638429.1 ENSP00000492290.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000638429.1Link to Ensembl Protein Viewer:ENSP00000492290.1Re-query CCDS DB by Nucleotide ID:ENST00000638429Re-query CCDS DB by Protein ID:ENSP00000492290
Current member NCBI NM_001406561.1 NP_001393490.1 Accepted alive Link to Nucleotide Sequence:NM_001406561.1Link to Protein Sequence:NP_001393490.1Re-query CCDS DB by Nucleotide ID:NM_001406561Re-query CCDS DB by Protein ID:NP_001393490Link to BLAST:NP_001393490.1
Current member NCBI NM_001406562.1 NP_001393491.1 Accepted alive Link to Nucleotide Sequence:NM_001406562.1Link to Protein Sequence:NP_001393491.1Re-query CCDS DB by Nucleotide ID:NM_001406562Re-query CCDS DB by Protein ID:NP_001393491Link to BLAST:NP_001393491.1
Current member NCBI NM_001406563.1 NP_001393492.1 Accepted alive Link to Nucleotide Sequence:NM_001406563.1Link to Protein Sequence:NP_001393492.1Re-query CCDS DB by Nucleotide ID:NM_001406563Re-query CCDS DB by Protein ID:NP_001393492Link to BLAST:NP_001393492.1
Current member NCBI NM_001406564.1 NP_001393493.1 Accepted alive Link to Nucleotide Sequence:NM_001406564.1Link to Protein Sequence:NP_001393493.1Re-query CCDS DB by Nucleotide ID:NM_001406564Re-query CCDS DB by Protein ID:NP_001393493Link to BLAST:NP_001393493.1
Current member NCBI NM_001406566.1 NP_001393495.1 Accepted alive Link to Nucleotide Sequence:NM_001406566.1Link to Protein Sequence:NP_001393495.1Re-query CCDS DB by Nucleotide ID:NM_001406566Re-query CCDS DB by Protein ID:NP_001393495Link to BLAST:NP_001393495.1
Current member NCBI NM_001406568.1 NP_001393497.1 Accepted alive Link to Nucleotide Sequence:NM_001406568.1Link to Protein Sequence:NP_001393497.1Re-query CCDS DB by Nucleotide ID:NM_001406568Re-query CCDS DB by Protein ID:NP_001393497Link to BLAST:NP_001393497.1
Original member Current member NCBI NM_004329.3 NP_004320.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004329.3Link to Protein Sequence:NP_004320.2Re-query CCDS DB by Nucleotide ID:NM_004329Re-query CCDS DB by Protein ID:NP_004320Link to BLAST:NP_004320.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001393490.1 532 P36894 532 100% 0 0
NP_001393491.1 532 P36894 532 100% 0 0
NP_001393492.1 532 P36894 532 100% 0 0
NP_001393493.1 532 P36894 532 100% 0 0
NP_001393495.1 532 P36894 532 100% 0 0
NP_001393497.1 532 P36894 532 100% 0 0
NP_004320.2 532 P36894 532 100% 0 0

Chromosomal Locations for CCDS 7378.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 86876019 86876085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86890062 86890224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86892127 86892229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86899794 86899890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86900027 86900126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86912240 86912384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86917134 86917326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86919172 86919469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86921520 86921695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86923376 86923506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 86923594 86923719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGCCTCAGCTATACATTTACATCAGATTATTGGGAGCCTATTTGTTCATCATTTCTCGTGTTCAAGGAC
AGAATCTGGATAGTATGCTTCATGGCACTGGGATGAAATCAGACTCCGACCAGAAAAAGTCAGAAAATGG
AGTAACCTTAGCACCAGAGGATACCTTGCCTTTTTTAAAGTGCTATTGCTCAGGGCACTGTCCAGATGAT
GCTATTAATAACACATGCATAACTAATGGACATTGCTTTGCCATCATAGAAGAAGATGACCAGGGAGAAA
CCACATTAGCTTCAGGGTGTATGAAATATGAAGGATCTGATTTTCAGTGCAAAGATTCTCCAAAAGCCCA
GCTACGCCGGACAATAGAATGTTGTCGGACCAATTTATGTAACCAGTATTTGCAACCCACACTGCCCCCT
GTTGTCATAGGTCCGTTTTTTGATGGCAGCATTCGATGGCTGGTTTTGCTCATTTCTATGGCTGTCTGCA
TAATTGCTATGATCATCTTCTCCAGCTGCTTTTGTTACAAACATTATTGCAAGAGCATCTCAAGCAGACG
TCGTTACAATCGTGATTTGGAACAGGATGAAGCATTTATTCCAGTTGGAGAATCACTAAAAGACCTTATT
GACCAGTCACAAAGTTCTGGTAGTGGGTCTGGACTACCTTTATTGGTTCAGCGAACTATTGCCAAACAGA
TTCAGATGGTCCGGCAAGTTGGTAAAGGCCGATATGGAGAAGTATGGATGGGCAAATGGCGTGGCGAAAA
AGTGGCGGTGAAAGTATTCTTTACCACTGAAGAAGCCAGCTGGTTTCGAGAAACAGAAATCTACCAAACT
GTGCTAATGCGCCATGAAAACATACTTGGTTTCATAGCGGCAGACATTAAAGGTACAGGTTCCTGGACTC
AGCTCTATTTGATTACTGATTACCATGAAAATGGATCTCTCTATGACTTCCTGAAATGTGCTACACTGGA
CACCAGAGCCCTGCTTAAATTGGCTTATTCAGCTGCCTGTGGTCTGTGCCACCTGCACACAGAAATTTAT
GGCACCCAAGGAAAGCCCGCAATTGCTCATCGAGACCTAAAGAGCAAAAACATCCTCATCAAGAAAAATG
GGAGTTGCTGCATTGCTGACCTGGGCCTTGCTGTTAAATTCAACAGTGACACAAATGAAGTTGATGTGCC
CTTGAATACCAGGGTGGGCACCAAACGCTACATGGCTCCCGAAGTGCTGGACGAAAGCCTGAACAAAAAC
CACTTCCAGCCCTACATCATGGCTGACATCTACAGCTTCGGCCTAATCATTTGGGAGATGGCTCGTCGTT
GTATCACAGGAGGGATCGTGGAAGAATACCAATTGCCATATTACAACATGGTACCGAGTGATCCGTCATA
CGAAGATATGCGTGAGGTTGTGTGTGTCAAACGTTTGCGGCCAATTGTGTCTAATCGGTGGAACAGTGAT
GAATGTCTACGAGCAGTTTTGAAGCTAATGTCAGAATGCTGGGCCCACAATCCAGCCTCCAGACTCACAG
CATTGAGAATTAAGAAGACGCTTGCCAAGATGGTTGAATCCCAAGATGTAAAAATCTGA

Translation (532 aa):
MPQLYIYIRLLGAYLFIISRVQGQNLDSMLHGTGMKSDSDQKKSENGVTLAPEDTLPFLKCYCSGHCPDD
AINNTCITNGHCFAIIEEDDQGETTLASGCMKYEGSDFQCKDSPKAQLRRTIECCRTNLCNQYLQPTLPP
VVIGPFFDGSIRWLVLLISMAVCIIAMIIFSSCFCYKHYCKSISSRRRYNRDLEQDEAFIPVGESLKDLI
DQSQSSGSGSGLPLLVQRTIAKQIQMVRQVGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQT
VLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDFLKCATLDTRALLKLAYSAACGLCHLHTEIY
GTQGKPAIAHRDLKSKNILIKKNGSCCIADLGLAVKFNSDTNEVDVPLNTRVGTKRYMAPEVLDESLNKN
HFQPYIMADIYSFGLIIWEMARRCITGGIVEEYQLPYYNMVPSDPSYEDMREVVCVKRLRPIVSNRWNSD
ECLRAVLKLMSECWAHNPASRLTALRIKKTLAKMVESQDVKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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