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Report for CCDS73663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73663.1 Public Homo sapiens 14 PROX2 24 110 108 CCDS HistoryNCBI Gene:283571Re-query CCDS DB by CCDS ID:73663.1Re-query CCDS DB by GeneID:283571See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 73663.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000556489.4 ENSP00000451223.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000556489.4Link to Ensembl Protein Viewer:ENSP00000451223.2Re-query CCDS DB by Nucleotide ID:ENST00000556489Re-query CCDS DB by Protein ID:ENSP00000451223
Original member Current member NCBI NM_001243007.2 NP_001229936.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001243007.2Link to Protein Sequence:NP_001229936.1Re-query CCDS DB by Nucleotide ID:NM_001243007Re-query CCDS DB by Protein ID:NP_001229936Link to BLAST:NP_001229936.1
Original member Current member NCBI NM_001384314.1 NP_001371243.1 Accepted alive Link to Nucleotide Sequence:NM_001384314.1Link to Protein Sequence:NP_001371243.1Re-query CCDS DB by Nucleotide ID:NM_001384314Re-query CCDS DB by Protein ID:NP_001371243Link to BLAST:NP_001371243.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229936.1 592 Q3B8N5-1 592 99.8311% 0 1
NP_001371243.1 592 Q3B8N5-1 592 99.8311% 0 1

Chromosomal Locations for CCDS 73663.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 74855132 74855302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74856801 74856995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74858407 74858514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 74862530 74863834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1779 nt):
ATGGATCCAAACTCCATCTTGCTTTCTCCTCAGCCCCAGATCTGCTCCCACCTAGCAGAAGCTTGTACGG
AAGGCGAGAGAAGCTCATCCCCTCCAGAGCTGGATAGAGACTCCCCGTTTCCCTGGAGTCAGGTCCCCAG
CTCCAGCCCTACAGACCCCGAATGGTTTGGTGATGAGCACATCCAGGCAAAGAGGGCCAGAGTGGAGACC
ATTGTCCGAGGCATGTGTCTCTCCCCGAATCCTCTGGTGCCAGGCAATGCGCAAGCTGGGGTCAGCCCAC
GCTGCCCAAAGAAGGCCCGAGAGAGGAAGAGGAAGCAGAACCTTCCCACACCGCAAGGCCTCCTGATGCC
AGCCCCTGCCTGGGACCAGGGCAACAGGAAGGGGGGCCCTCGTGTGAGAGAACAACTTCATCTGCTGAAG
CAACAGCTAAGACATCTGCAAGAGCACATCCTACAGGCTGCCAAGCCCAGGGACACAGCTCAGGGGCCAG
GAGGCTGTGGCACGGGGAAAGGCCCTCTGAGTGCAAAGCAGGGGAATGGCTGTGGGCCTCGCCCCTGGGT
TGTGGACGGTGACCACCAGCAAGGTACCAGCAAGGACCTCTCTGGGGCAGAAAAACACCAAGAGTCTGAG
AAGCCCAGTTTCCTTCCTTCTGGAGCACCAGCTTCACTAGAGATTCTGAGGAAAGAGCTGACCAGGGCAG
TGTCCCAGGCTGTGGACTCGGTATTACAAAAGGTACTATTGGATCCACCAGGCCACCTGACTCAGCTGGG
CAGAAGCTTCCAGGGGCAGGTGGCAGAGGGTAGAAGCGAGCCCTCACCTCCTGTGGGAGGGGCCTGTAAA
GATCCACTTGCTTTGGCTGCCTTGCCCAGGAGGGTCCAGCTACAAGCTGGGGTCCCAGTAGGAAATTTAT
CACTGGCCAAGCGTCTAGATTCTCCTAGGTACCCTATCCCTCCAAGAATGACCCCCAAACCCTGTCAGGA
TCCCCCAGCAAACTTTCCCTTGACTGCACCTTCCCACATCCAGGAAAATCAGATTCTTAGCCAGCTACTG
GGTCATAGATACAACAATGGCCATTGGAGTAGCAGTCCTCCCCAGGACTCATCTTCCCAGAGGCACCCCT
CCTCAGAGCCTGCCCTACGACCTTGGAGAACTACTAAGCCGCAACCATTGGTCCTGAGCCAGCAGCAGTG
TCCCTTGCCTTTCACCTCTGCCCATCTGGAAAGTCTACCCCTTCTTCCCTCGGTGAAGATGGAACAGAGA
GGCCTGCATGCTGTCATGGAGGCACTGCCTTTCTCTTTGGTCCACATCCAGGAGGGTCTAAACCCTGGTC
ACTTGAAGAAGGCCAAACTAATGTTTTTCTTCACACGATATCCCAGCTCCAACCTCCTGAAGGTTTATTT
TCCTGATGTTCAGTTCAACCGCTGCATTACCTCCCAGATGATCAAGTGGTTCAGCAACTTTCGTGAGTTT
TATTACATCCAAATGGAAAAATCTGCCCGGCAAGCAATTTCAGATGGTGTCACAAATCCCAAAATGCTGG
TGGTTCTCCGCAATTCAGAACTTTTTCAAGCTCTCAATATGCACTACAACAAGGGAAATGACTTTGAGGT
TCCAGATTGCTTCTTGGAAATTGCCAGCTTGACGTTACAGGAGTTCTTCAGGGCTGTCTCCGCAGGGAGA
GACTCAGATCCTTCCTGGAAGAAACCCATTTATAAAATTATTTCGAAACTGGACAGTGACATCCCAGAGA
TATTCAAATCTTCCAGCTATCCCCAGTAG

Translation (592 aa):
MDPNSILLSPQPQICSHLAEACTEGERSSSPPELDRDSPFPWSQVPSSSPTDPEWFGDEHIQAKRARVET
IVRGMCLSPNPLVPGNAQAGVSPRCPKKARERKRKQNLPTPQGLLMPAPAWDQGNRKGGPRVREQLHLLK
QQLRHLQEHILQAAKPRDTAQGPGGCGTGKGPLSAKQGNGCGPRPWVVDGDHQQGTSKDLSGAEKHQESE
KPSFLPSGAPASLEILRKELTRAVSQAVDSVLQKVLLDPPGHLTQLGRSFQGQVAEGRSEPSPPVGGACK
DPLALAALPRRVQLQAGVPVGNLSLAKRLDSPRYPIPPRMTPKPCQDPPANFPLTAPSHIQENQILSQLL
GHRYNNGHWSSSPPQDSSSQRHPSSEPALRPWRTTKPQPLVLSQQQCPLPFTSAHLESLPLLPSVKMEQR
GLHAVMEALPFSLVHIQEGLNPGHLKKAKLMFFFTRYPSSNLLKVYFPDVQFNRCITSQMIKWFSNFREF
YYIQMEKSARQAISDGVTNPKMLVVLRNSELFQALNMHYNKGNDFEVPDCFLEIASLTLQEFFRAVSAGR
DSDPSWKKPIYKIISKLDSDIPEIFKSSSYPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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