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Report for CCDS7629.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7629.1 Public Homo sapiens 10 PLEKHA1 24 110 108 CCDS HistoryNCBI Gene:59338Re-query CCDS DB by CCDS ID:7629.1Re-query CCDS DB by GeneID:59338See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7629.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368990.8 ENSP00000357986.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368990.8Link to Ensembl Protein Viewer:ENSP00000357986.3Re-query CCDS DB by Nucleotide ID:ENST00000368990Re-query CCDS DB by Protein ID:ENSP00000357986
Original member Current member EBI ENST00000392799.7 ENSP00000376547.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392799.7Link to Ensembl Protein Viewer:ENSP00000376547.3Re-query CCDS DB by Nucleotide ID:ENST00000392799Re-query CCDS DB by Protein ID:ENSP00000376547
Original member Current member EBI ENST00000433307.2 ENSP00000394416.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000433307.2Link to Ensembl Protein Viewer:ENSP00000394416.1Re-query CCDS DB by Nucleotide ID:ENST00000433307Re-query CCDS DB by Protein ID:ENSP00000394416
Original member Current member NCBI NM_001001974.4 NP_001001974.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001974.4Link to Protein Sequence:NP_001001974.1Re-query CCDS DB by Nucleotide ID:NM_001001974Re-query CCDS DB by Protein ID:NP_001001974Link to BLAST:NP_001001974.1
Original member Current member NCBI NM_001377230.1 NP_001364159.1 Accepted alive Link to Nucleotide Sequence:NM_001377230.1Link to Protein Sequence:NP_001364159.1Re-query CCDS DB by Nucleotide ID:NM_001377230Re-query CCDS DB by Protein ID:NP_001364159Link to BLAST:NP_001364159.1
Original member Current member NCBI NM_001377231.1 NP_001364160.1 Accepted alive Link to Nucleotide Sequence:NM_001377231.1Link to Protein Sequence:NP_001364160.1Re-query CCDS DB by Nucleotide ID:NM_001377231Re-query CCDS DB by Protein ID:NP_001364160Link to BLAST:NP_001364160.1
Original member Current member NCBI NM_001377232.1 NP_001364161.1 Accepted alive Link to Nucleotide Sequence:NM_001377232.1Link to Protein Sequence:NP_001364161.1Re-query CCDS DB by Nucleotide ID:NM_001377232Re-query CCDS DB by Protein ID:NP_001364161Link to BLAST:NP_001364161.1
Original member Current member NCBI NM_001377234.1 NP_001364163.1 Accepted alive Link to Nucleotide Sequence:NM_001377234.1Link to Protein Sequence:NP_001364163.1Re-query CCDS DB by Nucleotide ID:NM_001377234Re-query CCDS DB by Protein ID:NP_001364163Link to BLAST:NP_001364163.1
Original member Current member NCBI NM_001377235.1 NP_001364164.1 Accepted alive Link to Nucleotide Sequence:NM_001377235.1Link to Protein Sequence:NP_001364164.1Re-query CCDS DB by Nucleotide ID:NM_001377235Re-query CCDS DB by Protein ID:NP_001364164Link to BLAST:NP_001364164.1
Original member Current member NCBI NM_021622.5 NP_067635.2 Accepted alive Link to Nucleotide Sequence:NM_021622.5Link to Protein Sequence:NP_067635.2Re-query CCDS DB by Nucleotide ID:NM_021622Re-query CCDS DB by Protein ID:NP_067635Link to BLAST:NP_067635.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001974.1 404 Q9HB21-1 404 100% 0 0
NP_001364159.1 404 Q9HB21-1 404 100% 0 0
NP_001364160.1 404 Q9HB21-1 404 100% 0 0
NP_001364161.1 404 Q9HB21-1 404 100% 0 0
NP_001364163.1 404 Q9HB21-1 404 100% 0 0
NP_001364164.1 404 Q9HB21-1 404 100% 0 0
NP_067635.2 404 Q9HB21-1 404 100% 0 0

Chromosomal Locations for CCDS 7629.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 122393201 122393341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122397918 122397974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122400343 122400388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122406576 122406673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122412920 122413045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122415859 122416002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122417900 122417968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122424199 122424263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122424896 122424959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122426942 122427031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 122429624 122429938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1215 nt):
ATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGGGA
AATTTCTTCGAAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACA
GAACCTACCTTCTGGATCATCACGTGTTGGAGCCATTAAGCTTACCTACATTTCAAAGGTTAGCGATGCT
ACTAAGCTAAGGCCAAAGGCGGAGTTCTGTTTTGTTATGAATGCAGGAATGAGGAAGTACTTCCTACAAG
CCAATGATCAGCAGGACCTAGTGGAATGGGTAAATGTGTTAAACAAAGCTATAAAAATTACAGTACCAAA
GCAGTCAGACTCACAGCCTAATTCTGATAACCTAAGTCGCCATGGTGAATGTGGGAAAAAGCAAGTGTCT
TACAGAACTGATATTGTTGGTGGCGTACCCATCATTACTCCCACTCAGAAAGAAGAAGTAAATGAATGTG
GTGAAAGTATTGACAGAAATAATCTGAAACGGTCACAAAGCCATCTTCCTTACTTTACTCCTAAACCACC
TCAAGATAGTGCGGTTATCAAAGCTGGATATTGTGTAAAACAAGGAGCAGTGATGAAAAACTGGAAGAGA
AGATATTTTCAATTGGATGAAAACACAATAGGCTACTTCAAATCTGAACTGGAAAAGGAACCTCTTCGTG
TAATACCACTTAAAGAGGTTCATAAAGTCCAGGAATGTAAGCAAAGCGACATAATGATGAGGGACAACCT
CTTTGAAATTGTAACAACGTCTCGAACTTTCTATGTGCAGGCTGATAGCCCTGAAGAGATGCACAGTTGG
ATTAAAGCAGTCTCTGGCGCCATTGTAGCACAGCGGGGTCCCGGCAGATCTGCGTCTTCTGAGCATCCCC
CCGGTCCTTCAGAATCCAAACACGCTTTCCGTCCTACCAACGCAGCCACCGCCACCTCACATTCCACAGC
CTCTCGCAGCAACTCTTTGGTCTCAACCTTTACCATGGAGAAGCGAGGATTTTACGAGTCTCTTGCCAAG
GTCAAGCCAGGGAACTTCAAGGTCCAGACTGTCTCTCCAAGAGAACCAGCTTCCAAAGTGACTGAACAAG
CTCTGTTAAGACCTCAAAGTAAAAATGGCCCTCAGGAAAAAGATTGTGACCTAGTAGACTTGGACGATGC
GAGCCTTCCGGTCAGTGACGTGTGA

Translation (404 aa):
MPYVDRQNRICGFLDIEENENSGKFLRRYFILDTREDSFVWYMDNPQNLPSGSSRVGAIKLTYISKVSDA
TKLRPKAEFCFVMNAGMRKYFLQANDQQDLVEWVNVLNKAIKITVPKQSDSQPNSDNLSRHGECGKKQVS
YRTDIVGGVPIITPTQKEEVNECGESIDRNNLKRSQSHLPYFTPKPPQDSAVIKAGYCVKQGAVMKNWKR
RYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSW
IKAVSGAIVAQRGPGRSASSEHPPGPSESKHAFRPTNAATATSHSTASRSNSLVSTFTMEKRGFYESLAK
VKPGNFKVQTVSPREPASKVTEQALLRPQSKNGPQEKDCDLVDLDDASLPVSDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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