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Report for CCDS31482.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31482.1 Public Homo sapiens 11 CELF1 24 110 108 CCDS HistoryNCBI Gene:10658Re-query CCDS DB by CCDS ID:31482.1Re-query CCDS DB by GeneID:10658See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31482.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358597.7 ENSP00000351409.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358597.7Link to Ensembl Protein Viewer:ENSP00000351409.3Re-query CCDS DB by Nucleotide ID:ENST00000358597Re-query CCDS DB by Protein ID:ENSP00000351409
Original member Current member NCBI NM_001025596.3 NP_001020767.1 Accepted alive Link to Nucleotide Sequence:NM_001025596.3Link to Protein Sequence:NP_001020767.1Re-query CCDS DB by Nucleotide ID:NM_001025596Re-query CCDS DB by Protein ID:NP_001020767Link to BLAST:NP_001020767.1
Original member Current member NCBI NM_001376415.1 NP_001363344.1 Accepted alive Link to Nucleotide Sequence:NM_001376415.1Link to Protein Sequence:NP_001363344.1Re-query CCDS DB by Nucleotide ID:NM_001376415Re-query CCDS DB by Protein ID:NP_001363344Link to BLAST:NP_001363344.1
Original member Current member NCBI NM_001376417.1 NP_001363346.1 Accepted alive Link to Nucleotide Sequence:NM_001376417.1Link to Protein Sequence:NP_001363346.1Re-query CCDS DB by Nucleotide ID:NM_001376417Re-query CCDS DB by Protein ID:NP_001363346Link to BLAST:NP_001363346.1
Original member Current member NCBI NM_001376418.1 NP_001363347.1 Accepted alive Link to Nucleotide Sequence:NM_001376418.1Link to Protein Sequence:NP_001363347.1Re-query CCDS DB by Nucleotide ID:NM_001376418Re-query CCDS DB by Protein ID:NP_001363347Link to BLAST:NP_001363347.1
Original member Current member NCBI NM_001376419.1 NP_001363348.1 Accepted alive Link to Nucleotide Sequence:NM_001376419.1Link to Protein Sequence:NP_001363348.1Re-query CCDS DB by Nucleotide ID:NM_001376419Re-query CCDS DB by Protein ID:NP_001363348Link to BLAST:NP_001363348.1
Original member Current member NCBI NM_001376420.1 NP_001363349.1 Accepted alive Link to Nucleotide Sequence:NM_001376420.1Link to Protein Sequence:NP_001363349.1Re-query CCDS DB by Nucleotide ID:NM_001376420Re-query CCDS DB by Protein ID:NP_001363349Link to BLAST:NP_001363349.1
Original member Current member NCBI NM_001376421.1 NP_001363350.1 Accepted alive Link to Nucleotide Sequence:NM_001376421.1Link to Protein Sequence:NP_001363350.1Re-query CCDS DB by Nucleotide ID:NM_001376421Re-query CCDS DB by Protein ID:NP_001363350Link to BLAST:NP_001363350.1
Original member Current member NCBI NM_001376422.1 NP_001363351.1 Accepted alive Link to Nucleotide Sequence:NM_001376422.1Link to Protein Sequence:NP_001363351.1Re-query CCDS DB by Nucleotide ID:NM_001376422Re-query CCDS DB by Protein ID:NP_001363351Link to BLAST:NP_001363351.1
Original member Current member NCBI NM_001376424.1 NP_001363353.1 Accepted alive Link to Nucleotide Sequence:NM_001376424.1Link to Protein Sequence:NP_001363353.1Re-query CCDS DB by Nucleotide ID:NM_001376424Re-query CCDS DB by Protein ID:NP_001363353Link to BLAST:NP_001363353.1
Original member Current member NCBI NM_001376425.1 NP_001363354.1 Accepted alive Link to Nucleotide Sequence:NM_001376425.1Link to Protein Sequence:NP_001363354.1Re-query CCDS DB by Nucleotide ID:NM_001376425Re-query CCDS DB by Protein ID:NP_001363354Link to BLAST:NP_001363354.1
Original member Current member NCBI NM_001376426.1 NP_001363355.1 Accepted alive Link to Nucleotide Sequence:NM_001376426.1Link to Protein Sequence:NP_001363355.1Re-query CCDS DB by Nucleotide ID:NM_001376426Re-query CCDS DB by Protein ID:NP_001363355Link to BLAST:NP_001363355.1
Original member Current member NCBI NM_001376427.1 NP_001363356.1 Accepted alive Link to Nucleotide Sequence:NM_001376427.1Link to Protein Sequence:NP_001363356.1Re-query CCDS DB by Nucleotide ID:NM_001376427Re-query CCDS DB by Protein ID:NP_001363356Link to BLAST:NP_001363356.1
Original member Current member NCBI NM_001376428.1 NP_001363357.1 Accepted alive Link to Nucleotide Sequence:NM_001376428.1Link to Protein Sequence:NP_001363357.1Re-query CCDS DB by Nucleotide ID:NM_001376428Re-query CCDS DB by Protein ID:NP_001363357Link to BLAST:NP_001363357.1
Original member Current member NCBI NM_001376429.1 NP_001363358.1 Accepted alive Link to Nucleotide Sequence:NM_001376429.1Link to Protein Sequence:NP_001363358.1Re-query CCDS DB by Nucleotide ID:NM_001376429Re-query CCDS DB by Protein ID:NP_001363358Link to BLAST:NP_001363358.1
Original member Current member NCBI NM_001376430.1 NP_001363359.1 Accepted alive Link to Nucleotide Sequence:NM_001376430.1Link to Protein Sequence:NP_001363359.1Re-query CCDS DB by Nucleotide ID:NM_001376430Re-query CCDS DB by Protein ID:NP_001363359Link to BLAST:NP_001363359.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001020767.1 486 Q92879-1 486 100% 0 0
NP_001363344.1 486 Q92879-1 486 100% 0 0
NP_001363346.1 486 Q92879-1 486 100% 0 0
NP_001363347.1 486 Q92879-1 486 100% 0 0
NP_001363348.1 486 Q92879-1 486 100% 0 0
NP_001363349.1 486 Q92879-1 486 100% 0 0
NP_001363350.1 486 Q92879-1 486 100% 0 0
NP_001363351.1 486 Q92879-1 486 100% 0 0
NP_001363353.1 486 Q92879-1 486 100% 0 0
NP_001363354.1 486 Q92879-1 486 100% 0 0
NP_001363355.1 486 Q92879-1 486 100% 0 0
NP_001363356.1 486 Q92879-1 486 100% 0 0
NP_001363357.1 486 Q92879-1 486 100% 0 0
NP_001363358.1 486 Q92879-1 486 100% 0 0
NP_001363359.1 486 Q92879-1 486 100% 0 0

Chromosomal Locations for CCDS 31482.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 47472230 47472357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47473088 47473231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47475336 47475521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47476846 47476956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47477297 47477425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47478877 47478952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47482695 47482856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47483453 47483532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47484389 47484523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47486750 47486798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47487159 47487241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 47488837 47489014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1461 nt):
ATGAACGGCACCCTGGACCACCCAGACCAACCAGATCTTGATGCTATCAAGATGTTTGTGGGCCAGGTTC
CAAGGACCTGGTCTGAAAAGGACTTGCGGGAACTCTTCGAACAGTATGGTGCTGTGTATGAAATCAACGT
CCTAAGGGATAGGAGCCAAAACCCGCCTCAGAGCAAAGGGTGCTGTTTTGTTACATTTTACACCCGTAAA
GCTGCATTAGAAGCTCAGAATGCTCTTCACAACATGAAAGTCCTCCCAGGGATGCATCACCCTATACAGA
TGAAACCTGCTGACAGTGAGAAGAACAATGCAGTGGAAGACAGGAAGCTGTTTATTGGTATGATTTCCAA
GAAGTGCACTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTGGACAGATTGAAGAATGCCGGATATTG
CGGGGACCTGATGGCCTGAGCCGAGGTTGTGCATTTGTGACTTTTACAACAAGAGCCATGGCACAGACGG
CTATCAAGGCAATGCACCAAGCACAGACCATGGAGGGTTGCTCATCACCCATGGTGGTAAAATTTGCTGA
TACACAGAAGGACAAAGAACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCA
GCATCTGTGTGGGGAAACCTTGCTGGTCTAAATACTCTTGGACCCCAGTATTTAGCACTTTATTTGCAGC
TCCTTCAGCAGACTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAA
TGCAATGCAGTTACAGAATTTGGCTGCACTAGCTGCTGCAGCTAGTGCAGCTCAGAACACACCAAGTGGT
ACCAATGCTCTCACTACATCCAGCAGTCCCCTCAGCGTGCTCACTAGTTCAGGGTCCTCACCTAGCTCTA
GCAGCAGTAATTCTGTCAACCCCATAGCCTCACTTGGAGCCCTGCAGACATTAGCTGGAGCAACGGCTGG
CCTCAATGTTGGCTCTTTGGCAGGAATGGCTGCTTTAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAAT
GGCACCGGGAGCACCATGGAGGCCCTCACTCAGGCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCGC
TCCCCACTCTGTACAACCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGCTGGAAGCCAGAAGGAAGG
TCCAGAGGGAGCCAACCTGTTCATCTACCACCTGCCCCAGGAGTTTGGTGATCAGGACCTGCTGCAGATG
TTTATGCCCTTTGGGAATGTCGTGTCTGCCAAGGTTTTCATAGACAAGCAGACAAACCTGAGCAAGTGTT
TTGGTTTTGTAAGTTACGACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTCCATGAACGGCTTTCAGAT
TGGCATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAAGAATGACAGCAAGCCCTACTGA

Translation (486 aa):
MNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRK
AALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRIL
RGPDGLSRGCAFVTFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISA
ASVWGNLAGLNTLGPQYLALYLQLLQQTASSGNLNTLSSLHPMGGLNAMQLQNLAALAAAASAAQNTPSG
TNALTTSSSPLSVLTSSGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGSLAGMAALNGGLGSSGLSN
GTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQM
FMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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