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Report for CCDS87784.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87784.1 Public Homo sapiens X INTS6L 24 110 108 CCDS HistoryNCBI Gene:203522Re-query CCDS DB by CCDS ID:87784.1Re-query CCDS DB by GeneID:203522See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87784.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000639893.2 ENSP00000491427.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000639893.2Link to Ensembl Protein Viewer:ENSP00000491427.1Re-query CCDS DB by Nucleotide ID:ENST00000639893Re-query CCDS DB by Protein ID:ENSP00000491427
Original member Current member NCBI NM_001351601.3 NP_001338530.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001351601.3Link to Protein Sequence:NP_001338530.1Re-query CCDS DB by Nucleotide ID:NM_001351601Re-query CCDS DB by Protein ID:NP_001338530Link to BLAST:NP_001338530.1

Chromosomal Locations for CCDS 87784.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 135520993 135521103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135521241 135521318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135545423 135545572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135546380 135546469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135546702 135546885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135547137 135547265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135549642 135549805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135551994 135552146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135556168 135556300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135569337 135569431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135570436 135570546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135572815 135573033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135573939 135574062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135575084 135575226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135577193 135577427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135579788 135580162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135581050 135581143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 135581528 135581636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2697 nt):
ATGCCCATCCTGCTGTTCCTCATAGACACGTCCGCCTCTATGAACCAGCGCACTGACCTGGGCACCTCTT
ATTTGGACATTGCCAAAGGCGCTGTGGAGTTATTCTTGAAGCTGCGCGCCCGGGACCCGGCCAGCCGTGG
AGACAGGTACATGCTGGTCACCTACGACGAACCCCCGTACTGCATCAAGGCTGGTTGGAAGGAAAATCAT
GCAACATTCATGAGCGAACTAAAAAATCTTCAGGCTTCTGGACTGACTACTCTCGGTCAGGCTCTAAGAT
CCTCATTTGATTTGTTAAATCTCAATAGATTAATATCTGGAATAGACAATTATGGACAGGGGAGAAATCC
ATTTTTTTTAGAACCATCTATTTTAATTACCATCACAGATGGAAACAAGTTAACAAGTACTGCTGGTGTT
CAAGAAGAGCTCCATCTTCCTTTGAATTCCCCTCTGCCTGGAAGTGAACTAACCAAAGAACCTTTTCGTT
GGGATCAAAGGTTATTTGCCCTGGTGTTGCGTTTGCCTGGAGTGGCTTCTACCGAACCAGAGCAACTAGG
GAGCGTACCAACTGATGAATCTGCCATCACACAGATGTGTGAAGTCACAGGAGGTCGCTCCTACTGTGTG
AGAACACAAAGAATGTTGAATCAATGTTTAGAATCTCTAGTTCAAAAAGTTCAGAGTGGTGTAGTTATTA
ATTTTGAAAAAACAGGACCAGATCCACTTCCTATTGGAGAAGATGGACTTATGGATTCATCCAGGCCAAG
CAATTCATTTGCTGCTCAGCCATGGCATAGTTGTCATAAACTCATTTATGTACGACCTAACTCTAAAACT
GGTGTTCCTGTTGGACATTGGCCAATTCCAGAATCTTTTTGGCCAGATCAGAATTTACCTTCACTACCTC
CACGAACATCTCATCCTGTTGTGAGGTTCTCCTGTGTAGATTGTGAGCCAATGGTAATAGACAAACTTCC
TTTTGACAAATATGAACTTGAACCTTCGCCCTTAACTCAGTATATCTTGGAACGAAAGTCTCCCCATACC
TGCTGGCAGGTATTTGTTACTAGCAGTGGAAAGTACAATGAACTTGGATATCCATTTGGTTATTTAAAAG
CCAGTACAACTTTAACTTGTGTAAACCTCTTTGTGATGCCTTACAACTACCCAGTTTTACTTCCTCTTTT
AGATGACTTGTTTAAAGTTCACAAGCTTAAGCCAAATCTGAAGTGGCGACAGGCTTTTGACAGCTACTTA
AAAACTCTGCCTCCATACTACCTATTACCATTAAAGAAAGCACTAAGGATGATGGGAGCTCCAAATCTGA
TATCAGATAATTTAGATTGTGGACTTAGTTACAGTGTTATCTCTTACCTTAAAAAACTCAGCCAACAGAC
CAAACTAGAGTCAGAACGAATACTAGCATCAGTGGGGAAGAAACCTCCCCAGGAAATTGGAATTAAAGTG
AAAAATCATTCTGGAGGTGGCATGTCCTTGACTCACAATAAAAATTTTAGAAAACTATTGAAAGAAATCA
CAGGGGAAACTGCACTTAGACTGACAGAATTGAACACCAAAGAATTTGCTGGCTTCCAAATTGGGCTCTT
AAACAAGGATTTGAAACCTCAGACATACAGAAATGCTTATGATATTCCCCGTAGAGGTCTTTTAGACCAG
CTGACCAGAATGAGATCCAATCTGCTGAAAACGCACAAGTTTATTGTTGGACAAGATGAAGATTCCCTTC
ATAGTGTTCCAGTTGCACAAATGGGTAACTATCAGGAATATCTGAAGACATTGGCTTCTCCACTGCGAGA
GATTGATCCAGACCAACCCAAAAGACTGCATACTTTTGGCAATCCGTTTAAACAAGATAAGAAGGGAATG
ATGATTGATGAAGCAGATGAGTTTGTAGCAGGGCCACAAAACAAAGTGAAACGTCCAGGGGAACCCAACA
GTCCTATGTCATCTAAGAGAAGGCGGAGTATGTCCCTGCTGTTGAGGAAACCACAAACACCACCTACTGT
AACTAACCATGTGGGCGGAAAGGGACCACCCTCAGCCTCGTGGTTCCCATCTTATCCAAACCTCATAAAA
CCCACCCTTGTACATACAGATGCTACTATCATTCACGATGGCCATGAGGAGAAGATGGAAAATGGTCAGA
TCACACCTGATGGCTTCCTGTCAAAATCTGCTCCATCAGAGCTTATAAATATGACAGGAGATCTTATGCC
ACCCAACCAAGTGGATTCTCTGTCTGACGACTTCACAAGTCTCAGCAAAGATGGGCTGATTCAAAAACCT
GGTAGTAACGCATTTGTAGGAGGAGCCAAAAACTGCAGTCTCTCCGTAGATGACCAAAAAGACCCAGTAG
CATCTACTTTGGGAGCTATGCCAAATACATTACAAATCACTCCTGCTATGGCACAAGGAATCAATGCTGA
TATAAAACATCAATTAATGAAGGAAGTTCGAAAGTTTGGTCGAAAATATGAAAGAATTTTCATTTTGCTT
GAAGAAGTGCAAGGACCTCTGGAGATGAAGAAACAGTTTGTTGAATTTACCATCAAGGAAGCCGCAAGGT
TTAAAAGACGAGTCCTAATTCAGTACCTTGAGAAGGTACTAGAAAAAATAAATTCCCACCACCTTCACAA
CAACATTAGTCACATCAACAGCAGATCATCATGTTAG

Translation (898 aa):
MPILLFLIDTSASMNQRTDLGTSYLDIAKGAVELFLKLRARDPASRGDRYMLVTYDEPPYCIKAGWKENH
ATFMSELKNLQASGLTTLGQALRSSFDLLNLNRLISGIDNYGQGRNPFFLEPSILITITDGNKLTSTAGV
QEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGVASTEPEQLGSVPTDESAITQMCEVTGGRSYCV
RTQRMLNQCLESLVQKVQSGVVINFEKTGPDPLPIGEDGLMDSSRPSNSFAAQPWHSCHKLIYVRPNSKT
GVPVGHWPIPESFWPDQNLPSLPPRTSHPVVRFSCVDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHT
CWQVFVTSSGKYNELGYPFGYLKASTTLTCVNLFVMPYNYPVLLPLLDDLFKVHKLKPNLKWRQAFDSYL
KTLPPYYLLPLKKALRMMGAPNLISDNLDCGLSYSVISYLKKLSQQTKLESERILASVGKKPPQEIGIKV
KNHSGGGMSLTHNKNFRKLLKEITGETALRLTELNTKEFAGFQIGLLNKDLKPQTYRNAYDIPRRGLLDQ
LTRMRSNLLKTHKFIVGQDEDSLHSVPVAQMGNYQEYLKTLASPLREIDPDQPKRLHTFGNPFKQDKKGM
MIDEADEFVAGPQNKVKRPGEPNSPMSSKRRRSMSLLLRKPQTPPTVTNHVGGKGPPSASWFPSYPNLIK
PTLVHTDATIIHDGHEEKMENGQITPDGFLSKSAPSELINMTGDLMPPNQVDSLSDDFTSLSKDGLIQKP
GSNAFVGGAKNCSLSVDDQKDPVASTLGAMPNTLQITPAMAQGINADIKHQLMKEVRKFGRKYERIFILL
EEVQGPLEMKKQFVEFTIKEAARFKRRVLIQYLEKVLEKINSHHLHNNISHINSRSSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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