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Report for CCDS84337.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
84337.1 Public Mus musculus 17 Abcg8 23 108 98 CCDS HistoryNCBI Gene:67470Re-query CCDS DB by CCDS ID:84337.1Re-query CCDS DB by GeneID:67470See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 21, NCBI annotation release 106, Ensembl annotation release 86

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 84337.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000171915.1 ENSMUSP00000126675.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000171915.1Link to Ensembl Protein Viewer:ENSMUSP00000126675.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000171915Re-query CCDS DB by Protein ID:ENSMUSP00000126675
Original member Current member NCBI NM_001347418.1 NP_001334347.1 Accepted alive Link to Nucleotide Sequence:NM_001347418.1Link to Protein Sequence:NP_001334347.1Re-query CCDS DB by Nucleotide ID:NM_001347418Re-query CCDS DB by Protein ID:NP_001334347Link to BLAST:NP_001334347.1

Chromosomal Locations for CCDS 84337.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 84683232 84683294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84686620 84686721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84688532 84688688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84691800 84692038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84692484 84692616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84692711 84692980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84694992 84695154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84695242 84695322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84695952 84696151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84696674 84696750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84697295 84697562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84698449 84698576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 84698662 84698799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2019 nt):
ATGGCTGAGAAAACCAAAGAAGAGACCCAGCTGTGGAATGGGACTGTACTTCAGGATGCTTCGGGCCTCC
AGGACAGCTTGTTCTCCTCGGAAAGTGACAACAGTCTGTACTTCACCTACAGTGGTCAGTCCAACACTCT
GGAGGTCAGAGATCTCACCTACCAGGTGGACATCGCCTCTCAGGTGCCTTGGTTTGAGCAGCTGGCTCAG
TTCAAGATACCCTGGAGGTCTCATAGCAGCCAAGACTCCTGTGAGCTGGGCATCCGAAATCTAAGCTTCA
AAGTGAGGAGTGGACAGATGCTGGCCATCATAGGGAGCTCAGGCTGCGGGAGAGCCTCACTACTCGACGT
GATCACAGGCAGAGGCCACGGTGGCAAGATGAAATCAGGACAAATTTGGATAAATGGGCAACCCAGTACG
CCTCAGCTGGTGAGGAAGTGCGTTGCGCATGTGCGGCAGCATGACCAACTGCTGCCCAACCTGACCGTCA
GAGAGACCCTGGCTTTCATTGCCCAGATGCGCCTGCCCAGGACCTTCTCCCAGGCCCAGCGTGACAAACG
GGTGGAAGACGTAATCGCCGAGCTGCGGCTGCGGCAGTGCGCCAACACCAGAGTGGGCAACACGTATGTA
CGTGGGGTGTCCGGGGGTGAGCGCCGACGAGTGAGCATTGGGGTGCAGCTCCTGTGGAACCCAGGAATCC
TCATTCTGGATGAACCCACTTCTGGCCTCGACAGCTTCACAGCCCACAATCTGGTGACAACCTTGTCCCG
CCTGGCCAAGGGCAACAGGCTGGTGCTCATCTCCCTCCACCAGCCTCGCTCTGACATCTTCAGGCTATTT
GACCTGGTCCTTCTGATGACATCTGGCACCCCTATCTACCTGGGGGCGGCGCAGCAAATGGTGCAGTACT
TCACATCCATTGGCCACCCTTGTCCTCGCTATAGCAACCCTGCGGACTTCTACGTGGACTTGACCAGCAT
CGACAGACGCAGCAAAGAACGGGAGGTGGCCACCGTGGAGAAGGCACAGTCTCTTGCAGCCCTGTTCCTA
GAAAAAGTACAAGGCTTTGATGACTTTCTGTGGAAAGCTGAGGCAAAGGAACTCAACACAAGCACCCACA
CAGTCAGCCTGACCCTCACACAGGACACTGACTGTGGGACTGCTGTTGAGCTGCCCGGGATGATAGAGCA
GTTTTCCACCCTGATCCGTCGTCAGATTTCCAATGACTTCCGGGACCTGCCCACGCTGCTCATTCATGGG
TCGGAAGCCTGCCTGATGTCCCTCATCATTGGCTTCCTTTACTACGGCCATGGGGCCAAGCAGCTCTCCT
TCATGGACACAGCAGCCCTCCTCTTCATGATAGGGGCGCTCATTCCTTTCAATGTCATCCTGGATGTCGT
CTCCAAATGTCACTCGGAGAGGTCAATGCTGTACTATGAGCTGGAAGACGGGCTGTACACTGCTGGTCCT
TATTTCTTTGCCAAGATCCTAGGAGAATTGCCGGAGCACTGTGCCTACGTCATCATCTACGCGATGCCCA
TCTACTGGCTGACAAACCTGCGGCCCGTGCCTGAGCTCTTCCTTCTACACTTCCTGCTCGTGTGGTTGGT
GGTCTTCTGCTGCAGGACCATGGCCCTGGCTGCCTCTGCCATGCTGCCCACCTTCCACATGTCCTCCTTC
TTCTGCAATGCCCTCTACAACTCCTTCTACCTTACTGCCGGCTTCATGATAAACTTGGACAACCTGTGGA
TAGTGCCTGCATGGATCTCCAAGCTGTCGTTCCTCCGGTGGTGCTTCTCGGGGCTGATGCAGATTCAATT
TAATGGACACCTTTACACCACACAAATCGGCAACTTCACCTTCTCCATCCTCGGAGACACGATGATCAGT
GCCATGGACCTGAACTCGCATCCACTCTATGCGATCTACCTCATTGTCATCGGCATCAGCTACGGCTTCC
TGTTCCTGTACTATCTATCCTTGAAGCTCATCAAACAGAAGTCAATTCAAGACTGGTGA

Translation (672 aa):
MAEKTKEETQLWNGTVLQDASGLQDSLFSSESDNSLYFTYSGQSNTLEVRDLTYQVDIASQVPWFEQLAQ
FKIPWRSHSSQDSCELGIRNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMKSGQIWINGQPST
PQLVRKCVAHVRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYV
RGVSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAKGNRLVLISLHQPRSDIFRLF
DLVLLMTSGTPIYLGAAQQMVQYFTSIGHPCPRYSNPADFYVDLTSIDRRSKEREVATVEKAQSLAALFL
EKVQGFDDFLWKAEAKELNTSTHTVSLTLTQDTDCGTAVELPGMIEQFSTLIRRQISNDFRDLPTLLIHG
SEACLMSLIIGFLYYGHGAKQLSFMDTAALLFMIGALIPFNVILDVVSKCHSERSMLYYELEDGLYTAGP
YFFAKILGELPEHCAYVIIYAMPIYWLTNLRPVPELFLLHFLLVWLVVFCCRTMALAASAMLPTFHMSSF
FCNALYNSFYLTAGFMINLDNLWIVPAWISKLSFLRWCFSGLMQIQFNGHLYTTQIGNFTFSILGDTMIS
AMDLNSHPLYAIYLIVIGISYGFLFLYYLSLKLIKQKSIQDW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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