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Report for CCDS57667.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57667.1 Public Mus musculus 9 Kirrel3 23 108 98 CCDS HistoryNCBI Gene:67703Re-query CCDS DB by CCDS ID:57667.1Re-query CCDS DB by GeneID:67703See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57667.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045091.12 ENSMUSP00000048863.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045091.12Link to Ensembl Protein Viewer:ENSMUSP00000048863.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000045091Re-query CCDS DB by Protein ID:ENSMUSP00000048863
Original member Current member EBI ENSMUST00000187625.6 ENSMUSP00000139951.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000187625.6Link to Ensembl Protein Viewer:ENSMUSP00000139951.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000187625Re-query CCDS DB by Protein ID:ENSMUSP00000139951
Original member NCBI NM_001190914.1 NP_001177843.1 Updated not alive Link to Nucleotide Sequence:NM_001190914.1Link to Protein Sequence:NP_001177843.1Re-query CCDS DB by Nucleotide ID:NM_001190914Re-query CCDS DB by Protein ID:NP_001177843
Current member NCBI NM_001190914.2 NP_001177843.1 Accepted alive Link to Nucleotide Sequence:NM_001190914.2Link to Protein Sequence:NP_001177843.1Re-query CCDS DB by Nucleotide ID:NM_001190914Re-query CCDS DB by Protein ID:NP_001177843Link to BLAST:NP_001177843.1

Chromosomal Locations for CCDS 57667.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 34911828 34911861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 34939112 34939261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 34944370 34944519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 34990935 34991092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35000855 35001005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35007693 35007798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35013268 35013416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35015255 35015382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35016422 35016548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35020091 35020191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35023454 35023652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35028332 35028439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35029774 35029883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35034202 35034288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 35034837 35035280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2202 nt):
ATGGCCAAGGACAAGTTTCGGAGAATGAATGAAGGTCAAGTCTACTCCTTCAGCCAGCAACCCCAGGACC
AAGTGGTGGTGTCAGGACAGCCAGTGACTCTGCTGTGTGCCATCCCTGAATATGATGGCTTCGTCCTGTG
GATCAAAGATGGCTTGGCTCTGGGTGTAGGCAGAGACCTCTCAAGTTACCCCCAGTACCTGGTGGTGGGG
AACCACCTCTCAGGAGAGCATCACCTGAAGATCCTGAGGGCTGAGCTTCAGGATGATGCCGTGTATGAGT
GCCAGGCCATCCAGGCTGCCATCCGGTCCCGCCCTGCACGCCTCACCGTCCTGGTGCCACCAGATGACCC
CATCATCCTAGGGGGGCCTGTGATCAGCCTTCGGGCAGGGGACCCCCTCAACCTCACCTGCCACGCAGAC
AATGCCAAGCCTGCGGCTTCCATCATCTGGCTACGTAAAGGAGAGGTCATCAATGGAGCCACCTACTCCA
AGACCCTGCTTCGAGACGGCAAACGAGAAAGCATTGTCAGCACCCTCTTCATCTCCCCAGGAGACGTGGA
AAATGGACAGAGTATTGTGTGCCGAGCCACCAACAAAGCCATCCCCGGAGGAAAAGAGACCTCTGTCACC
ATAGACATCCAGCATCCACCGCTTGTCAACTTGTCCGTGGAACCACAGCCGGTATTGGAGGACAACATCG
TCACGTTCCACTGCTCTGCAAAGGCCAACCCAGCTGTCACCCAGTACAGGTGGGCCAAACGGGGTCACAT
CATCAAGGAGGCATCTGGGGAGCTGTATAGGACCACGGTGGACTACACATACTTCTCAGAGCCTGTATCC
TGTGAAGTAACCAATGCCCTGGGCAGCACCAACCTCAGCCGCACAGTGGATGTATACTTCGGTCCTCGAA
TGACCTCAGAGCCTCAGTCACTGCTGGTAGATCTGGGCTCCGATGCTGTCTTCAGCTGTGCGTGGATCGG
CAACCCGTCTCTGACCATCGTGTGGATGAAACGAGGTTCTGGTGTGGTCCTGAGCAATGAAAAGACCCTA
ACCCTCAAATCTGTCCGCCAAGAGGATGCTGGGAAGTACGTGTGCCGGGCTGTGGTGCCCCGGGTAGGAG
CTGGGGAGAGAGAGGTGACCTTGACTGTCAATGGACCCCCCATCATCTCCAGCACACAGACCCAGCACGC
CCTCCACGGAGAGAAGGGCCAGATCAAATGCTTCATCCGGAGCACACCACCGCCTGACCGAATTGCCTGG
TCCTGGAAGGAGAATGTGCTGGAGTCAGGGACATCAGGGCGCTACACAGTGGAGACGGTGAACACGGAGG
AGGGAGTCATCTCCACATTGACCATTAGCAACATTGTGCGTGCTGACTTCCAGACCATATACAACTGTAC
AGCCTGGAACAGCTTTGGCTCTGACACAGAGATCATCCGACTCAAGGAACAAGAGTCTGTACCAATGGCC
GTCATCATCGGGGTGGCCGTAGGAGCTGGCGTGGCCTTCCTCGTCCTAATGGCAACCATTGTGGCCTTCT
GCTGTGCCCGTTCCCAGAGAAATCTCAAAGGTGTTGTATCAGCCAAAAATGATATTCGAGTGGAAATTGT
GCACAAGGAGCCATCTTCTGGCCGGGAGGCTGAGGACCACACCACCATAAAGCAGCTGATGATGGACCGG
GGTGAATTCCAACAAGACTCGGTGCTGAAACAGCTGGAGGTCCTCAAAGAAGAGGAGAAGGAGTTTCAGA
ACCTGAAGGACCCCACCAACGGCTACTACAGCGTCAACACCTTCAAAGAACACCATTCAACTCCAACCAT
CTCCCTGTCCAGCTGCCAGCCAGACCTGCGTCCGACAGGCAAACAGCGTGTGCCCACAGGCATGTCCTTC
ACCAACATCTACAGCACCTTGAGCGGCCAGGGCCGCCTCTACGACTATGGACAGAGGTTTGTGCTGGGCA
TGGGCAGCTCTTCCATTGAGCTTTGTGAGCGGGAGTTTCAGAGGGGCTCCCTCAGCGACAGCAGCTCCTT
CCTGGACACGCAGTGTGACAGCAGCGTCAGCAGCAGCGGCAAGCAAGATGGCTACGTGCAGTTTGACAAG
GCCAGCAAGGCTTCTGCCTCCTCTTCCCACCATTCCCAGTCCTCTTCCCAGAACTCCGACCCCAGCCGAC
CCCTGCAGCGGCGGATGCAGACTCACGTCTGA

Translation (733 aa):
MAKDKFRRMNEGQVYSFSQQPQDQVVVSGQPVTLLCAIPEYDGFVLWIKDGLALGVGRDLSSYPQYLVVG
NHLSGEHHLKILRAELQDDAVYECQAIQAAIRSRPARLTVLVPPDDPIILGGPVISLRAGDPLNLTCHAD
NAKPAASIIWLRKGEVINGATYSKTLLRDGKRESIVSTLFISPGDVENGQSIVCRATNKAIPGGKETSVT
IDIQHPPLVNLSVEPQPVLEDNIVTFHCSAKANPAVTQYRWAKRGHIIKEASGELYRTTVDYTYFSEPVS
CEVTNALGSTNLSRTVDVYFGPRMTSEPQSLLVDLGSDAVFSCAWIGNPSLTIVWMKRGSGVVLSNEKTL
TLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGEKGQIKCFIRSTPPPDRIAW
SWKENVLESGTSGRYTVETVNTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQESVPMA
VIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPSSGREAEDHTTIKQLMMDR
GEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSSCQPDLRPTGKQRVPTGMSF
TNIYSTLSGQGRLYDYGQRFVLGMGSSSIELCEREFQRGSLSDSSSFLDTQCDSSVSSSGKQDGYVQFDK
ASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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