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Report for CCDS47324.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47324.1 Public Homo sapiens 5 KIF4B 24 110 108 CCDS HistoryNCBI Gene:285643Re-query CCDS DB by CCDS ID:47324.1Re-query CCDS DB by GeneID:285643See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47324.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000435029.6 ENSP00000387875.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000435029.6Link to Ensembl Protein Viewer:ENSP00000387875.3Re-query CCDS DB by Nucleotide ID:ENST00000435029Re-query CCDS DB by Protein ID:ENSP00000387875
Original member Current member NCBI NM_001099293.3 NP_001092763.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001099293.3Link to Protein Sequence:NP_001092763.1Re-query CCDS DB by Nucleotide ID:NM_001099293Re-query CCDS DB by Protein ID:NP_001092763Link to BLAST:NP_001092763.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092763.1 1234 Q2VIQ3 1234 100% 0 0

Chromosomal Locations for CCDS 47324.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 155013860 155017564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3705 nt):
ATGAAGGAAGAGGTGAAGGGAATTCCTGTAAGAGTGGCACTGCGTTGTCGCCCTCTGGTCCCCAAAGAGA
TTAGCGAGGGCTGCCAGATGTGCCTTTCCTTCGTGCCCGGGGAGACTCAGGTGGTGGTTGGTACTGATAA
ATCCTTCACCTACGATTTTGTGTTTGACCCCTGTACTGAGCAGGAAGAAGTCTTCAATAAAGCAGTAGCG
CCGCTCATAAAAGGCATATTTAAAGGATATAATGCAACGGTCCTGGCCTATGGGCAGACTGGCTCTGGAA
AAACCTATTCAATGGGAGGTGCATACACTGCGGAGCAGGAGAATGAACCAACAGTTGGCATTATTCCTAG
GGTAATACAACTGCTCTTCAAAGAAATTGATAAAAAGAGTGACTTTGAATTTACTCTGAAAGTGTCTTAC
TTAGAGATTTACAATGAAGAAATTTTGGATCTTCTATGCCCATCTCGTGAGAAAGCTCAAATAAATATAC
GGGAGGATCCTAAGGAAGGCATAAAGATTGTGGGACTCACTGAGAAGACTGTTTTAGTTGCCTTGGATAC
TGTTTCCTGTTTGGAGCAGGGCAACAACTCTAGGACTGTGGCCTCCACAGCTATGAACTCCCAGTCGTCC
CGATCTCATGCCATCTTTACAATCTCCATAGAGCAAAGAAAGAAAAGTGACAAGAATTGCAGCTTTCGCT
CCAAGCTGCATCTTGTAGATCTCGCTGGATCAGAAAGACAGAAGAAAACCAAGGCTGAAGGGGATCGTCT
AAAAGAGGGTATTAATATTAACCGAGGCCTCCTATGCTTGGGAAATGTAATCAGTGCTCTTGGAGATGAC
AAAAAGGGTAGCTTTGTGCCCTACAGAGATTCCAAGTTAACTCGACTGCTGCAAGATTCTCTAGGAGGTA
ACAGCCACACTCTTATGATAGCCTGTGTGAGTCCTGCTGACTCCAATCTAGAGGAAACATTAAGTACCCT
TCGCTATGCTGACAGAGCAAGAAAAATCAAGAACAAACCTATTGTTAATATTGATCCCCACACAGCTGAA
CTTAATCATCTAAAGCAACAGGTACAACAGCTACAAGTCTTGTTGCTACAAGCCCATGGAGGTACCCTGC
CTGGATCTATAAATGCAGAACCATCAGAGAATCTACAATCCCTGATGGAGAAGAATCAGTCCCTGGTAGA
GGAGAATGAAAAATTAAGTCGTTGTCTGAGCAAGGCAGCTGGTCAGACAGCCCAGATGTTGGAGAGGATC
ATTTTGACAGAGCAAGTGAATGAAAAACTGAACGCCAAGCTAGAAGAGCTCAGGCAGCATGTGGCCTGCA
AGCTGGATCTTCAAAAGCTAGTGGAGACTTTGGAAGACCAGGAATTGAAAGAAAATGTAGAGATAATTTG
TAACCTGCAGCAACTGATTACCCAGTTATCAGATGAAACTGTTGCTTGCACGGCTGCAGCCATTGATACT
GCGGTAGAAGAAGAAGCTCAAGTGGAAACCAGTCCAGAGACAAGCAGGTCTTCTGACGCTTTTACCACTC
AGCATGCTCTCCATCAAGCTCAGATGTCTAAGGAGGTGGTTGAGTTGAATAACGCCCTTGCACTGAAAGA
GGCCCTAGTTAGGAAGATGACTCAGAACGACAACCAACTACAGCCCATTCAGTTTCAATACCAGGATAAC
ATAAAAAATCTAGAATTAGAAGTCATCAATCTGCAAAAGGAAAAGGAAGAATTGGTTCGTGAACTTCAGA
CAGCAAAGAAGAATGTCAACCAAGCCAAGCTGAGTGAGCACCGCCACAAACTTCTCCAGGAGCTGGAGGG
TCAAATAGCTGATCTGAAGAAGAAACTGAATGAGCAGTCCAAACTTCTGAAACTAAAGGAATCCACAGAG
CGTACTGTCTCCAAGCTGAACCAAGAGATATGGATGATGAAAAACCAGCGGGTACAGTTAATGCGTCAAA
TGAAAGAGGATGCTGAGAAGTTTAGACAATGGAAGCAGAAAAAAGACAAAGAAGTAATACAGTTGAAAGA
ACGAGACCGTAAGAGGCAATATGAGCTGCTCAAACTTGAAAGAAACTTCCAGAAACAATCCAGTGTGCTC
AGACGTAAAACGGAAGAGGCAGCAGCTGCCAACAAGCGACTCAAGGATGCTCTCCAGAAACAACGAGAGG
TCACAGATAAGCGGAAAGAGACTCAGAGCCATGGAAAGGAAGGTATTGCAGCTCGAGTGAGGAATTGGCT
TGGAAATGAAATTGAGGTTATGGTCAGTACTGAGGAAGCCAAACGCCATCTGAATGACCTCCTTGAAGAC
AGAAAGATCCTGGCTCAGGATGTGGTTCAACTCAAAGAAAAAAAGGAATCTCGGGAGAATCCACCTCCTA
AACTCCGGAAGTGTACATTCTCCCTTTCTGAGGTGCATGGTCAAGTTTTGGAGTCAGAAGATTGTATTAC
AAAACAGATTGAAAGCCTAGAGACTGAAATGGAACTCAGGAGTGCTCAGATTGCTGACCTACAGCAGAAG
CTGCTGGATGCAGAAAGTGAAGATAGGCCAAAACAATGCTGGGAGAATATTGCCACCATTCTGGAAGCCA
AGTGTGCCCTGAAATATTTGATTGGAGAGCTGGTCTCCTCCAAAATACATGTCACCAAACTTGAAAACAG
CCTGAGACAGAGCAAGGCCAGCTGTGCTGACATGCAGAAGATGCTATTTGAGGAACAAAATCATTTTTCT
GAGATAGAGACAGAGTTACAAGCTGAGCTGGTCAGAATGGAGCAACAGCACCAAGAGAAGGTGCTATACC
TTGTCAGCCAGCTGCAGGAAAGCCAAATGGCAGAGAAGCAGTTAGAGAAATCAGCCAGTGAAAAGGAACA
ACAGCTGGTGAGCACACTGCAGTGTCAGGATGAAGAACTTGAGAAGATGCGAGAAGTGTGTGAGCAAAAT
CAGCAGCTTCTCCAAGAGAATGAAATCATCAAGCAGAAACTGATCCTCCTCCAGGTAGCCAGCAGACAGA
AACATCTTCCTAATGATACCCTTCTATCTCCAGACTCTTCTTTTGAATATATCCCACCTAAGCCAAAACC
TTCTCGTGTTAAAGAAAAGTTTCTGGAGCAAAGCATGGACATCGAGGATCTAAAATATTGTTCAGAGCAT
TCTGTGAATGAGCATGAAGATGGTGATGGTGATGGCGACAGTGATGAGGGGGATGATGAGGAATGGAAGC
CAACAAAATTAGTCAAGGTGTCCAGGAAGAACATCCAAGGGTGTTCCTGCAAGGGCTGGTGTGGGAACAA
GCAGTGTGGGTGCAGGAAGCAAAAGTCAGACTGTGGTGTGGACTGTAGCTGTGACCCCACAAAGTGTCGG
AACCGCCAGCAAGGCAAGGATAGCTTGGGCACTGTTGAACAGACCCAGGATTCCGAAGGCTCCTTCAAAC
TGGAGGATCCTACCGAGGTGACCCCAGGATTGAGCTTCTTTAACCCTGTCTGTGCCACCCCCAATAGCAA
GATCCTGAAAGAGATGTGTGACATGGAGCAGGTGCTGTCAAAGAAGACTGCTCCAGCTCCCTCCCCTTTT
GACCTCCCAGAGTCGAAACATGGAGCAACAGAATACCAACAAAATAAGCCTCCAGGGAAGAAAAAGAAAC
GAGCTCTGGCTAGCAACACCAGCTTCTTCTCTGGCTGCTCCCCTATCGAAGAAGAGGCCCACTGA

Translation (1234 aa):
MKEEVKGIPVRVALRCRPLVPKEISEGCQMCLSFVPGETQVVVGTDKSFTYDFVFDPCTEQEEVFNKAVA
PLIKGIFKGYNATVLAYGQTGSGKTYSMGGAYTAEQENEPTVGIIPRVIQLLFKEIDKKSDFEFTLKVSY
LEIYNEEILDLLCPSREKAQINIREDPKEGIKIVGLTEKTVLVALDTVSCLEQGNNSRTVASTAMNSQSS
RSHAIFTISIEQRKKSDKNCSFRSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDD
KKGSFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLSTLRYADRARKIKNKPIVNIDPHTAE
LNHLKQQVQQLQVLLLQAHGGTLPGSINAEPSENLQSLMEKNQSLVEENEKLSRCLSKAAGQTAQMLERI
ILTEQVNEKLNAKLEELRQHVACKLDLQKLVETLEDQELKENVEIICNLQQLITQLSDETVACTAAAIDT
AVEEEAQVETSPETSRSSDAFTTQHALHQAQMSKEVVELNNALALKEALVRKMTQNDNQLQPIQFQYQDN
IKNLELEVINLQKEKEELVRELQTAKKNVNQAKLSEHRHKLLQELEGQIADLKKKLNEQSKLLKLKESTE
RTVSKLNQEIWMMKNQRVQLMRQMKEDAEKFRQWKQKKDKEVIQLKERDRKRQYELLKLERNFQKQSSVL
RRKTEEAAAANKRLKDALQKQREVTDKRKETQSHGKEGIAARVRNWLGNEIEVMVSTEEAKRHLNDLLED
RKILAQDVVQLKEKKESRENPPPKLRKCTFSLSEVHGQVLESEDCITKQIESLETEMELRSAQIADLQQK
LLDAESEDRPKQCWENIATILEAKCALKYLIGELVSSKIHVTKLENSLRQSKASCADMQKMLFEEQNHFS
EIETELQAELVRMEQQHQEKVLYLVSQLQESQMAEKQLEKSASEKEQQLVSTLQCQDEELEKMREVCEQN
QQLLQENEIIKQKLILLQVASRQKHLPNDTLLSPDSSFEYIPPKPKPSRVKEKFLEQSMDIEDLKYCSEH
SVNEHEDGDGDGDSDEGDDEEWKPTKLVKVSRKNIQGCSCKGWCGNKQCGCRKQKSDCGVDCSCDPTKCR
NRQQGKDSLGTVEQTQDSEGSFKLEDPTEVTPGLSFFNPVCATPNSKILKEMCDMEQVLSKKTAPAPSPF
DLPESKHGATEYQQNKPPGKKKKRALASNTSFFSGCSPIEEEAH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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