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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS51657.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
51657.1 |
Public |
Mus musculus |
5 |
Gtf2ird1 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 51657.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000074114.11 |
ENSMUSP00000073752.5 |
Accepted |
alive |
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NCBI |
NM_001081467.2 |
NP_001074936.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001074936.1 |
1001 |
Q9JI57-8 |
1001 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 51657.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3006 nt): ATGGCCTTGCTGGGGAAGCACTGTGACATCCCCACCAACGGCTGTGGGTCTGAGCGCTGGAACTCCACCT TCGCCCGCAAGGACGAACTCATCAACAGTCTGGTGTCCGCCTTAGACTCCATGTGCTCGGCGCTCTCCAA GCTGAACACGGAGGTGGCCTGCGTGGCGGTACACAATGAGAGCGTCTTCGTGATGGGCACCGAGAAGGGA AGGGTGTTTCTGAACACTCGGAAGGAGCTACAGTCAGACTTCCTCAGGTTCTGCCGGGGACCCCTGTGGA ACGATCCAGAAGCAGGACACCCTAAAAAGGTGCAGCGCTGTGAAGGCGGTGGCCGGAGCCTCCCGCGGTC CTCTCTGGAGCAGTGCTCGGATGTGTACCTGCTGCAGAAGATGGTAGAGGAAGTGTTTGATGTTCTTTAT AGTGAGGCTATGGGCAGGGCCACCGTGGTACCTTTGCCCTATGAGAGGCTGCTCAGGGAGCCGGGGCTAC TGGCGGTGCAGGGGCTGCCCGAGGGCCTGGCCTTCCGGAGGCCAGCAGAGTATGACCCCAAGGCACTCAT GGCCATATTGGAGCACAGTCACCGAATTCGGTTTAAGCTCAGGAGGCCTCCTGATGACGGTGGGCAGGAC ACGAAGGCGCTGGTGGAGATGAACGGTATCTCTCTGCTACCCAAGGGGTCCCGAGACTGTGGTCTGCATG GCCAGGCCTCCAAGGTCGCTCCCCAAGACCTGACCCCCACCGCCACCCCATCCTCTATGGCCAACTTCCT GTACAGCACTTCGATGCCCAACCACACGATCCGGGAACTCAAGCAGGAGGTGCCAACCTGCCCGTTGACC CCCAGCGACCTGGGCATGGGCTGGCCCGTGCCTGAGCCCCATGTCCCCAGCACCCAAGATTTCTCTGATT GCTGTGGACAGACGCCTGCAGGGCCTGCTGGGCCTCTCATCCAGAATGTCCATGCTTCCAAGCGCATCCT CTTCTCCATCGTCCATGACAAGTCAGAGAAGTGGGATCCCTTCATCAAGGAAATGGAGGACATCAATACC CTGCGGGAGTGCGTGCAGATTCTGTTTAACAGCAGATACGCGGAAGCCCTGGGCCTGGACCACATGGTCC CTGTGCCCTATAGGAAGATTGCCTGTGACCCCGAGGCTGTGGAAATTGTGGGTATTCCAGACAAGATCCC CTTCAAGCGACCCTGTACTTACGGAGTGCCGAAGCTGAAGAGGATTCTGGAGGAGCGACACAGCATTCAC TTCATTATCAAGAGAATGTTCGATGAGCGCATTTTCACAGGGAACAAGTTTACCAAAGACCCCATGAAGC TGGAGCCAGCTAGCCCACCAGAAGACACTTCCACAGAAGTCTGTAGGGACAGCATGCTGGACCTGGCTGG GACTGCTTGGTCAGACATGAGCAGCGTCTCTGAAGACTGTGGGCCAGGAACCTCAGGAGAGATAGCAATG TTGAGGCCTATCAAAATCGAGCCAGAGGAGCTGGACATTATTCAGGTTACGGTCTCAGATCCTTCACCTA CCTCTGAGGAGATGACTGACTCGTTACCTGGGCATCTGCCCTCAGAGGATTCCGGTTATGGGATGGAAAT GCCGGCTGACAAAGGCCCCAGTGAAGAACCGTGGTCAGAAGAGAGGCCGGCCGAAGAGAGCCCTGGTGAC GTGATCCGGCCCCTACGGAAGCAGGTGGAGATGCTGTTCAACACGAAATATGCCAAAGCTATTGGTACCT CAGAGCCGGTCAAGGTGCCCTACTCCAAGTTCCTGATGCACCCGGAGGAGCTGTTCGTACTGGGACTGCC TGAAGGCATCTCTCTTCGGAGACCCAACTGCTTTGGGATTGCAAAGCTGCGGAAGATTCTGGAAGCGAGC AACAGCATCCAGTTTGTCATCAAGAGACCCGAACTGCTCACTGACGGTGTCAAAGAACCTGTTCTGGACA CTCAAGAGAGGGACTCCTGGGACCGTCTTGTGGACGAGACCCCGAAGAGACAGGGCCTTCAAGAAAATTA CAACACCAGACTCTCGCGGATCGACATCGCCAACACGCTTAGGGAACAAGTCCAAGACCTGTTTAACAAG AAATACGGTGAAGCTCTGGGCATCAAATACCCAGTGCAGGTGCCCTACAAGAGAATCAAAAGCAACCCAG GCTCGGTAATCATTGAAGGCCTACCCCCCGGGATCCCATTCCGCAAACCCTGCACCTTTGGCTCCCAGAA CCTGGAAAGGATTCTCTCTGTGGCTGACAAGATCAAGTTCACGGTCACCAGGCCATTCCAAGGACTTATC CCAAAGCCTGAAACCAAAATTCTCACTACAGGACATGAAGCTGGGAAAACCACCAGACCAAGGAGACTGC AACAGGACACCTGGCAGCCAGATGAGGATGATGCCAACAGACTGGGGGAGAAGGTGATCCTCCGAGAGCA GGTGAAGGAGCTCTTCAATGAGAAATACGGTGAGGCCCTGGGACTGAATCGGCCTGTGCTGGTCCCTTAC AAACTGATCCGGGACAGCCCAGATGCCGTGGAGGTGAAGGGCCTCCCAGATGACATCCCCTTCCGGAACC CCAACACCTATGACATCCATCGGCTGGAGAAGATCCTGAAGGCCAGGGAGCATGTGCGGATGGTCATCAT CAACCAGCTCCAACCTTTTGGGGACGTCTGCAACAATGCCAAGGTGCCAGCCAAAGACAACATTCCCAAG CGCAAGAGAAAGAGGGTCTCTGAAGGCAACTCAGTCTCCTCTTCTTCCTCCTCTTCATCTTCGTCCTCTA ACCCAGAGTCTGTGGCATCCACCAACCAGATCTCCCTCGTGGTAAAGTCACGCGGATCCGAACTTCACCC TAATTCTGTGTGGCCTTTGCCCCTTCCTCGGGCAGGGCCATCCACAGCTCCAGGAACTGGGAGGCACTGG GCTCTGAGAGGGACTCAGCCAACCACAGAGGGGCAGGCACATCCACTCGTTTTGCCCACAAGATAG
Translation (1001 aa): MALLGKHCDIPTNGCGSERWNSTFARKDELINSLVSALDSMCSALSKLNTEVACVAVHNESVFVMGTEKG RVFLNTRKELQSDFLRFCRGPLWNDPEAGHPKKVQRCEGGGRSLPRSSLEQCSDVYLLQKMVEEVFDVLY SEAMGRATVVPLPYERLLREPGLLAVQGLPEGLAFRRPAEYDPKALMAILEHSHRIRFKLRRPPDDGGQD TKALVEMNGISLLPKGSRDCGLHGQASKVAPQDLTPTATPSSMANFLYSTSMPNHTIRELKQEVPTCPLT PSDLGMGWPVPEPHVPSTQDFSDCCGQTPAGPAGPLIQNVHASKRILFSIVHDKSEKWDPFIKEMEDINT LRECVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIVGIPDKIPFKRPCTYGVPKLKRILEERHSIH FIIKRMFDERIFTGNKFTKDPMKLEPASPPEDTSTEVCRDSMLDLAGTAWSDMSSVSEDCGPGTSGEIAM LRPIKIEPEELDIIQVTVSDPSPTSEEMTDSLPGHLPSEDSGYGMEMPADKGPSEEPWSEERPAEESPGD VIRPLRKQVEMLFNTKYAKAIGTSEPVKVPYSKFLMHPEELFVLGLPEGISLRRPNCFGIAKLRKILEAS NSIQFVIKRPELLTDGVKEPVLDTQERDSWDRLVDETPKRQGLQENYNTRLSRIDIANTLREQVQDLFNK KYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILSVADKIKFTVTRPFQGLI PKPETKILTTGHEAGKTTRPRRLQQDTWQPDEDDANRLGEKVILREQVKELFNEKYGEALGLNRPVLVPY KLIRDSPDAVEVKGLPDDIPFRNPNTYDIHRLEKILKAREHVRMVIINQLQPFGDVCNNAKVPAKDNIPK RKRKRVSEGNSVSSSSSSSSSSSNPESVASTNQISLVVKSRGSELHPNSVWPLPLPRAGPSTAPGTGRHW ALRGTQPTTEGQAHPLVLPTR
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