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Report for CCDS15086.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15086.1 Public Mus musculus 1 Utp14b 23 108 98 CCDS HistoryNCBI Gene:195434Re-query CCDS DB by CCDS ID:15086.1Re-query CCDS DB by GeneID:195434See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15086.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000053760.11 ENSMUSP00000052149.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000053760.11Link to Ensembl Protein Viewer:ENSMUSP00000052149.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000053760Re-query CCDS DB by Protein ID:ENSMUSP00000052149
Original member Current member EBI ENSMUST00000151622.1 ENSMUSP00000121391.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000151622.1Link to Ensembl Protein Viewer:ENSMUSP00000121391.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000151622Re-query CCDS DB by Protein ID:ENSMUSP00000121391
Original member NCBI NM_001001981.3 NP_001001981.2 Updated not alive Link to Nucleotide Sequence:NM_001001981.3Link to Protein Sequence:NP_001001981.2Re-query CCDS DB by Nucleotide ID:NM_001001981Re-query CCDS DB by Protein ID:NP_001001981
Current member NCBI NM_001001981.4 NP_001001981.2 Accepted alive Link to Nucleotide Sequence:NM_001001981.4Link to Protein Sequence:NP_001001981.2Re-query CCDS DB by Nucleotide ID:NM_001001981Re-query CCDS DB by Protein ID:NP_001001981Link to BLAST:NP_001001981.2
Original member NCBI NM_001136226.1 NP_001129698.1 Updated not alive Link to Nucleotide Sequence:NM_001136226.1Link to Protein Sequence:NP_001129698.1Re-query CCDS DB by Nucleotide ID:NM_001136226Re-query CCDS DB by Protein ID:NP_001129698
Current member NCBI NM_001136226.2 NP_001129698.1 Accepted alive Link to Nucleotide Sequence:NM_001136226.2Link to Protein Sequence:NP_001129698.1Re-query CCDS DB by Nucleotide ID:NM_001136226Re-query CCDS DB by Protein ID:NP_001129698Link to BLAST:NP_001129698.1

Chromosomal Locations for CCDS 15086.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 78664387 78666729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2343 nt):
ATGAAGCCAAAGATGAGACCAGATCCTTCTTCAAGAGCTAACAGGCCCTGTGAGAAGAAGGAGGCTGCTA
CCATGAACATGGCCAGGAATGTGACAGACCTTCTGGCTTTGAGCCAGCAGGAAGAACTAGTGGATTTGCC
AGAAAACTATCCACTGAGTACGAGTGAAGATGAGGGGGACAGTGATGGAGAAGGAAAACGTCAAAAACTT
CTGGAAGCAGTCAGTTCCCTTGGTAGAAAGAATAAATGGAAGTTGGCAGAGAGATCTGAGGCTAGTCGGA
TGGTTTCAGAGTTCAATGTCACTTCTGAAGGATCAGGTGAAAAGCTGGTCCTTTCCGATTTGCTTGGGTC
TGCTACAGCATTATCTTCGGTGGCTGCTGTGAAAAAACAGCTGCATAGAGTCAAGTCAAAGACGCTCACC
CCACCCCTTAACAAAGAAGAGGCTGACCGAGCCCTCAGGGAAGCAGCATTCAGCAAAACCTCACAAATGC
TCTCCAGGTGGGATCCGGTGGTTCTGAAGAACCGGCAGGCAGAGCAGTTGATTTTTCCCATGGAGAAGGA
GCCGCCAGCGGTTGCACCCATTGAACATGTTTTTACTGACTGGAAAGTAAGAACCCCTCTGGAACGAGAA
GTTTTTAACCTTCTTCATAAGAACAAGCAGCCAGTAACAGACCCTTTATTGACTCCCGTGGAAACAGCCT
CCATCAGAGCCATGAGCCTGGAAGAAGCCAAGATACGCCGAGCAGAGCTTCAGAGGACGCGAGCTCTACA
GTCCTATTATGAGGCTAGAGCTCGAAGAGAGAAGAGAATCAAGAGTAAGAAGTATCACAGAGCTCTAAAG
AAAGGAAAGGCCAAGAAAGCCTTAAAAGAGTTTGAAGAGCTGTGGAAAGACTGCCCAAATGCTGCATTGC
AAGAACTGGAGAAAATGGAAAAGGCCAGAATGACAGAACGGATGAGCCTTAAGCACCAGGGCAGTGGGAA
ATGGGCAAAGTCAAAGGCAATTATGGCCAAATATGACCCTGAGGCTCGAAAAGCTATGCAAGAACAATTG
GCTAAGAACAGAGAACTGACACAGAAACTCCAGGTAGTTTCAGAGAGTGAGGAAGAGGACGGATGCACAG
AAGAGGGAATAGTCTCTGTCTCCCATGGAATGGATGACCTACAGATGAATGCAGATGGTGTAAATCCCTG
GATGCTTAGCAGTTGCAACAGCAATGCAAAGCGGGGTGAGATCAAGACCGATCCTGAACAGATGCCTGAG
TTTGTGGCCCATGTGTCTTCTGAGAGTGAGGGAGATGAAAGACCAGTGGCAGAAGAACTTGTGTTAAAAG
AAAGATCCTTTCAAGAAAGAGTTGATCCCAACAATGCTAAGCTAATGGATGGCCAAGAAACAGAAGACTC
TGATAGCCAGGAGGTATTACAGAAACTCAACAAGGAAAGTCATCAATCTGACAATCAAAAAGTGAGTTCA
GAGGAAAATGTTCTCCATATCCAGAGAGAGGACCTTGCCTCAGAGAAGTTGTTGGTGCTTCAAAGGCTAG
AGAGAGCACATGTTCTGGAACAACAAGGAGAGTTGAGCAAAGAAGAACATTATCCAAAAAAAGGGCTTTC
CAGACCTTTGTTGAAAGGGGATTGGAAGGAGATGAAGCCACTCACCAACCCTGATGCCTCTGGAGGGAAG
AAAAAGAAGGAACAAATGATTGATCTACGGAACCTCCTAACTGCTAACTCATCTCCTGTGAGGTCTTTGG
CTGTGCCCACAATACAGCAGTTAGAAGATGAAGTGGAGACCGATCACAAGCAGCTAATAAGGGAAGCTTT
TGCTGGGGATGATGTCATAAGAGAGTTCTTAAAAGAGAAGAGGGAAGCTATAGAGACAAATAAACCAAAG
GACTTGGACCTGTCATTGCCTGGATGGGGTGAGTGGGTTGGTATGGGCCTGAAGCCCAGCGCCAAGAAAA
GACGCCGTTTTCTTATTAAAGCTCCTGAGAGTTCTCCAAGAAAAGACAAGAATTTGCCGAATGTGATTAT
CAGTGAGAAGCGCAACATCCATGCAGCTGCTCATCAGGTGCGGGCGCTTCCACACCCATTCACCCACCAG
CAGCAGTTTGAAAGGACTATCCAAAACCCTATTGGGTACATGTGGAACACCCAGAGGACCTTCCAAAAGC
TGACAGTTCCCAAGGTTGGCACCAAGCTAGGCCATATCATTAAGCCCATAAAAGCAGAAAATGTAGGGTA
CTGCTCTTCCACAAGGTCTGACCTCTCTATCCTACAGAGCAGTCAGAAGTGCCTCTCCAGAAAACAGCAA
AAACAACTGAAGAAGTTGAGCTCTGCAGATTGA

Translation (780 aa):
MKPKMRPDPSSRANRPCEKKEAATMNMARNVTDLLALSQQEELVDLPENYPLSTSEDEGDSDGEGKRQKL
LEAVSSLGRKNKWKLAERSEASRMVSEFNVTSEGSGEKLVLSDLLGSATALSSVAAVKKQLHRVKSKTLT
PPLNKEEADRALREAAFSKTSQMLSRWDPVVLKNRQAEQLIFPMEKEPPAVAPIEHVFTDWKVRTPLERE
VFNLLHKNKQPVTDPLLTPVETASIRAMSLEEAKIRRAELQRTRALQSYYEARARREKRIKSKKYHRALK
KGKAKKALKEFEELWKDCPNAALQELEKMEKARMTERMSLKHQGSGKWAKSKAIMAKYDPEARKAMQEQL
AKNRELTQKLQVVSESEEEDGCTEEGIVSVSHGMDDLQMNADGVNPWMLSSCNSNAKRGEIKTDPEQMPE
FVAHVSSESEGDERPVAEELVLKERSFQERVDPNNAKLMDGQETEDSDSQEVLQKLNKESHQSDNQKVSS
EENVLHIQREDLASEKLLVLQRLERAHVLEQQGELSKEEHYPKKGLSRPLLKGDWKEMKPLTNPDASGGK
KKKEQMIDLRNLLTANSSPVRSLAVPTIQQLEDEVETDHKQLIREAFAGDDVIREFLKEKREAIETNKPK
DLDLSLPGWGEWVGMGLKPSAKKRRRFLIKAPESSPRKDKNLPNVIISEKRNIHAAAHQVRALPHPFTHQ
QQFERTIQNPIGYMWNTQRTFQKLTVPKVGTKLGHIIKPIKAENVGYCSSTRSDLSILQSSQKCLSRKQQ
KQLKKLSSAD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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