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Report for CCDS13659.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13659.1 Public Homo sapiens 21 ETS2 24 110 108 CCDS HistoryNCBI Gene:2114Re-query CCDS DB by CCDS ID:13659.1Re-query CCDS DB by GeneID:2114See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13659.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360214.8 ENSP00000353344.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000360214.8Link to Ensembl Protein Viewer:ENSP00000353344.3Re-query CCDS DB by Nucleotide ID:ENST00000360214Re-query CCDS DB by Protein ID:ENSP00000353344
Original member Current member EBI ENST00000360938.8 ENSP00000354194.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360938.8Link to Ensembl Protein Viewer:ENSP00000354194.3Re-query CCDS DB by Nucleotide ID:ENST00000360938Re-query CCDS DB by Protein ID:ENSP00000354194
Original member Current member EBI ENST00000662305.1 ENSP00000499226.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000662305.1Link to Ensembl Protein Viewer:ENSP00000499226.1Re-query CCDS DB by Nucleotide ID:ENST00000662305Re-query CCDS DB by Protein ID:ENSP00000499226
Original member Current member EBI ENST00000653642.1 ENSP00000499315.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000653642.1Link to Ensembl Protein Viewer:ENSP00000499315.1Re-query CCDS DB by Nucleotide ID:ENST00000653642Re-query CCDS DB by Protein ID:ENSP00000499315
Original member Current member EBI ENST00000666778.1 ENSP00000499775.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000666778.1Link to Ensembl Protein Viewer:ENSP00000499775.1Re-query CCDS DB by Nucleotide ID:ENST00000666778Re-query CCDS DB by Protein ID:ENSP00000499775
Original member Current member NCBI NM_005239.6 NP_005230.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005239.6Link to Protein Sequence:NP_005230.1Re-query CCDS DB by Nucleotide ID:NM_005239Re-query CCDS DB by Protein ID:NP_005230Link to BLAST:NP_005230.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005230.1 469 P15036 469 100% 0 0

Chromosomal Locations for CCDS 13659.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 38810035 38810106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 38813003 38813114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 38814273 38814392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 38814781 38814981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 38817008 38817091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 38818425 38818646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 38819503 38819766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 38821586 38821704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21
21 38822674 38822889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1410 nt):
ATGAATGATTTCGGAATCAAGAATATGGACCAGGTAGCCCCTGTGGCTAACAGTTACAGAGGGACACTCA
AGCGCCAGCCAGCCTTTGACACCTTTGATGGGTCCCTGTTTGCTGTTTTTCCTTCTCTAAATGAAGAGCA
AACACTGCAAGAAGTGCCAACAGGCTTGGATTCCATTTCTCATGACTCCGCCAACTGTGAATTGCCTTTG
TTAACCCCGTGCAGCAAGGCTGTGATGAGTCAAGCCTTAAAAGCTACCTTCAGTGGCTTCAAAAAGGAAC
AGCGGCGCCTGGGCATTCCAAAGAACCCCTGGCTGTGGAGTGAGCAACAGGTATGCCAGTGGCTTCTCTG
GGCCACCAATGAGTTCAGTCTGGTGAACGTGAATCTGCAGAGGTTCGGCATGAATGGCCAGATGCTGTGT
AACCTTGGCAAGGAACGCTTTCTGGAGCTGGCACCTGACTTTGTGGGTGACATTCTCTGGGAACATCTGG
AGCAAATGATCAAAGAAAACCAAGAAAAGACAGAAGATCAATATGAAGAAAATTCACACCTCACCTCCGT
TCCTCATTGGATTAACAGCAATACATTAGGTTTTGGCACAGAGCAGGCGCCCTATGGAATGCAGACACAG
AATTACCCCAAAGGCGGCCTCCTGGACAGCATGTGTCCGGCCTCCACACCCAGCGTACTCAGCTCTGAGC
AGGAGTTTCAGATGTTCCCCAAGTCTCGGCTCAGCTCCGTCAGCGTCACCTACTGCTCTGTCAGTCAGGA
CTTCCCAGGCAGCAACTTGAATTTGCTCACCAACAATTCTGGGACTCCCAAAGACCACGACTCCCCTGAG
AACGGTGCGGACAGCTTCGAGAGCTCAGACTCCCTCCTCCAGTCCTGGAACAGCCAGTCGTCCTTGCTGG
ATGTGCAACGGGTTCCTTCCTTCGAGAGCTTCGAAGATGACTGCAGCCAGTCTCTCTGCCTCAATAAGCC
AACCATGTCTTTCAAGGATTACATCCAAGAGAGGAGTGACCCAGTGGAGCAAGGCAAACCAGTTATACCT
GCAGCTGTGCTGGCCGGCTTCACAGGAAGTGGACCTATTCAGCTGTGGCAGTTTCTCCTGGAGCTGCTAT
CAGACAAATCCTGCCAGTCATTCATCAGCTGGACTGGAGACGGATGGGAGTTTAAGCTCGCCGACCCCGA
TGAGGTGGCCCGCCGGTGGGGAAAGAGGAAAAATAAGCCCAAGATGAACTACGAGAAGCTGAGCCGGGGC
TTACGCTACTATTACGACAAGAACATCATCCACAAGACGTCGGGGAAGCGCTACGTGTACCGCTTCGTGT
GCGACCTCCAGAACTTGCTGGGGTTCACGCCCGAGGAACTGCACGCCATCCTGGGCGTCCAGCCCGACAC
GGAGGACTGA

Translation (469 aa):
MNDFGIKNMDQVAPVANSYRGTLKRQPAFDTFDGSLFAVFPSLNEEQTLQEVPTGLDSISHDSANCELPL
LTPCSKAVMSQALKATFSGFKKEQRRLGIPKNPWLWSEQQVCQWLLWATNEFSLVNVNLQRFGMNGQMLC
NLGKERFLELAPDFVGDILWEHLEQMIKENQEKTEDQYEENSHLTSVPHWINSNTLGFGTEQAPYGMQTQ
NYPKGGLLDSMCPASTPSVLSSEQEFQMFPKSRLSSVSVTYCSVSQDFPGSNLNLLTNNSGTPKDHDSPE
NGADSFESSDSLLQSWNSQSSLLDVQRVPSFESFEDDCSQSLCLNKPTMSFKDYIQERSDPVEQGKPVIP
AAVLAGFTGSGPIQLWQFLLELLSDKSCQSFISWTGDGWEFKLADPDEVARRWGKRKNKPKMNYEKLSRG
LRYYYDKNIIHKTSGKRYVYRFVCDLQNLLGFTPEELHAILGVQPDTED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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