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Report for CCDS94407.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
94407.1 Public Homo sapiens 9 SPAAR 24 110 108 CCDS HistoryNCBI Gene:158376Re-query CCDS DB by CCDS ID:94407.1Re-query CCDS DB by GeneID:158376See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 94407.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000638062.1 ENSP00000489755.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000638062.1Link to Ensembl Protein Viewer:ENSP00000489755.1Re-query CCDS DB by Nucleotide ID:ENST00000638062Re-query CCDS DB by Protein ID:ENSP00000489755
Original member Current member EBI ENST00000443779.3 ENSP00000490187.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000443779.3Link to Ensembl Protein Viewer:ENSP00000490187.1Re-query CCDS DB by Nucleotide ID:ENST00000443779Re-query CCDS DB by Protein ID:ENSP00000490187
Original member Current member EBI ENST00000636776.1 ENSP00000490606.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000636776.1Link to Ensembl Protein Viewer:ENSP00000490606.1Re-query CCDS DB by Nucleotide ID:ENST00000636776Re-query CCDS DB by Protein ID:ENSP00000490606
Original member Current member NCBI NM_001348107.3 NP_001335036.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001348107.3Link to Protein Sequence:NP_001335036.2Re-query CCDS DB by Nucleotide ID:NM_001348107Re-query CCDS DB by Protein ID:NP_001335036Link to BLAST:NP_001335036.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001335036.2 75 A0A1B0GVQ0-2 75 100% 0 0

Chromosomal Locations for CCDS 94407.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 35910464 35910691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (228 nt):
ATGGAAACGGCAGTGATTGGGGTGGTGGTGGTGCTGTTCGTGGTGACTGTGGCCATCACCTGCGTCCTCT
GCTGCTTCAGCTGTGACTCAAGGGCCCAGGATCCTCAGGGGGGTCCTGGCCGCAGCTTCACGGTGGCCAC
GTTTCGCCAGGAAGCTTCTCTCTTCACGGGGCCTGTTCGCCATGCCCAGCCAGTGCCAAGTGCCCAGGAC
TTCTGGACCTTCATGTGA

Translation (75 aa):
METAVIGVVVVLFVVTVAITCVLCCFSCDSRAQDPQGGPGRSFTVATFRQEASLFTGPVRHAQPVPSAQD
FWTFM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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